RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W YLR159WP0CE97 114 aa3.24□□□□□ -1.89
PTR3YFR029W YLR161WP0CE98 114 aa3.24□□□□□ -1.89
PTR3YFR029W YPT31P38555 223 aaKnown RBP3.24□□□□□ -1.89
PTR3YFR029W YEL075CP39972 122 aa3.24□□□□□ -1.89
PTR3YFR029W VTC1P40046 129 aaRIP-Chip data3.24□□□□□ -1.89not detected
PTR3YFR029W KOG1P38873 1557 aa3.24□□□□□ -1.89
PTR3YFR029W NSG1P38837 291 aa3.24□□□□□ -1.89
PTR3YFR029W YGL193CP53097 103 aa3.24□□□□□ -1.89
PTR3YFR029W NHP10Q03435 203 aa3.24□□□□□ -1.89
PTR3YFR029W TVP18Q04767 167 aa3.24□□□□□ -1.89
PTR3YFR029W SEC59P20048 519 aa3.23□□□□□ -1.89
PTR3YFR029W RPB9P27999 122 aa3.23□□□□□ -1.89
PTR3YFR029W MRPL15P36523 253 aa3.23□□□□□ -1.89
PTR3YFR029W TIF34P40217 347 aaKnown RBP3.23□□□□□ -1.89
PTR3YFR029W ECM19Q06011 112 aa3.23□□□□□ -1.89
PTR3YFR029W HUT1Q12520 339 aa3.23□□□□□ -1.89
PTR3YFR029W YER078W-AQ3E7A2 54 aa3.23□□□□□ -1.89
PTR3YFR029W REP2P03872 296 aa3.22□□□□□ -1.89
PTR3YFR029W YCR043CP25361 127 aa3.22□□□□□ -1.89
PTR3YFR029W RIO2P40160 425 aaKnown RBP3.22□□□□□ -1.89
PTR3YFR029W SYS1P41544 203 aa3.22□□□□□ -1.89
PTR3YFR029W YGL230CP53074 147 aa3.22□□□□□ -1.89
PTR3YFR029W OSH6Q02201 448 aa3.22□□□□□ -1.89
PTR3YFR029W NDD1Q08887 554 aa3.22□□□□□ -1.89
PTR3YFR029W YPL264CQ08980 353 aa3.22□□□□□ -1.89
PTR3YFR029W SSK2P53599 1579 aa3.22□□□□□ -1.89
PTR3YFR029W BET1P22804 142 aa3.22□□□□□ -1.89
PTR3YFR029W AIM2P39721 246 aa3.22□□□□□ -1.89
PTR3YFR029W YER188WP40103 239 aa3.22□□□□□ -1.89
PTR3YFR029W GEP7P53171 287 aa3.22□□□□□ -1.89
PTR3YFR029W RPL21AQ02753 160 aaKnown RBP3.22□□□□□ -1.89
PTR3YFR029W FCF2Q12035 217 aaPredicted RBP3.22□□□□□ -1.89
PTR3YFR029W YGL194C-AQ2V2P6 80 aa3.22□□□□□ -1.89
PTR3YFR029W YOR020W-AQ3E824 90 aa3.22□□□□□ -1.89
PTR3YFR029W CCA1P21269 546 aa3.21□□□□□ -1.9
PTR3YFR029W SIN3P22579 1536 aa3.21□□□□□ -1.9
PTR3YFR029W YNR062CP53748 327 aa3.21□□□□□ -1.9
PTR3YFR029W EST3Q03096 181 aa3.21□□□□□ -1.9
PTR3YFR029W API2Q04413 109 aa3.21□□□□□ -1.9
PTR3YFR029W ESP1Q03018 1630 aa3.21□□□□□ -1.9
PTR3YFR029W THO2P53552 1597 aaKnown RBP3.21□□□□□ -1.9
PTR3YFR029W YGL041W-AP0C5N3 154 aa3.2□□□□□ -1.9
PTR3YFR029W MRS4P23500 304 aa3.2□□□□□ -1.9
PTR3YFR029W TOM40P23644 387 aaKnown RBP3.2□□□□□ -1.9
PTR3YFR029W AHT1P29589 182 aa3.2□□□□□ -1.9
PTR3YFR029W RCN1P36054 211 aa3.2□□□□□ -1.9
PTR3YFR029W PFS2P42841 465 aaKnown RBP3.2□□□□□ -1.9
PTR3YFR029W BAT2P47176 376 aaKnown RBP3.2□□□□□ -1.9
PTR3YFR029W RSM10Q03201 203 aa3.2□□□□□ -1.9
PTR3YFR029W YDR115WQ04598 105 aa3.2□□□□□ -1.9
PTR3YFR029W YMR252CQ04814 134 aa3.2□□□□□ -1.9
PTR3YFR029W YCL021W-AQ96VH3 125 aa3.2□□□□□ -1.9
PTR3YFR029W DUR1,2P32528 1835 aaKnown RBP3.2□□□□□ -1.9
PTR3YFR029W ATG2P53855 1592 aa3.2□□□□□ -1.9
PTR3YFR029W GAT4P40569 121 aa3.2□□□□□ -1.9
PTR3YFR029W RPE1P46969 238 aa3.2□□□□□ -1.9
PTR3YFR029W YLR412C-AQ3E742 68 aa3.2□□□□□ -1.9
PTR3YFR029W YOR376W-AQ3E805 51 aa3.2□□□□□ -1.9
PTR3YFR029W PAN1P32521 1480 aa3.19□□□□□ -1.9
PTR3YFR029W ASK1P35734 292 aa3.19□□□□□ -1.9
PTR3YFR029W RPB11P38902 120 aa3.19□□□□□ -1.9
PTR3YFR029W YAR029WP39549 74 aa3.19□□□□□ -1.9
PTR3YFR029W MPM1P40364 252 aa3.19□□□□□ -1.9
PTR3YFR029W GAL83Q04739 417 aa3.19□□□□□ -1.9
PTR3YFR029W YLR281CQ05863 155 aa3.19□□□□□ -1.9
PTR3YFR029W ANT1Q06497 328 aa3.19□□□□□ -1.9
PTR3YFR029W SMT3Q12306 101 aaKnown RBP3.19□□□□□ -1.9
PTR3YFR029W DFM1Q12743 341 aaKnown RBP3.19□□□□□ -1.9
PTR3YFR029W YCR075W-AQ3E830 75 aa3.19□□□□□ -1.9
PTR3YFR029W URA5P13298 226 aaKnown RBP3.19□□□□□ -1.9
PTR3YFR029W ANB1P19211 157 aa3.19□□□□□ -1.9
PTR3YFR029W SRL3P36167 246 aa3.19□□□□□ -1.9
PTR3YFR029W HTD2P38790 280 aaKnown RBP3.19□□□□□ -1.9
PTR3YFR029W TEM1P38987 245 aa3.19□□□□□ -1.9
PTR3YFR029W YFL067WP43537 175 aa3.19□□□□□ -1.9
PTR3YFR029W YOL029CQ08187 201 aa3.19□□□□□ -1.9
PTR3YFR029W JID1Q12350 301 aa3.19□□□□□ -1.9
PTR3YFR029W PEP1P32319 1579 aa3.18□□□□□ -1.9
PTR3YFR029W SGA1P08019 549 aa3.18□□□□□ -1.9
PTR3YFR029W DDR48P18899 430 aaKnown RBP3.18□□□□□ -1.9
PTR3YFR029W HSP12P22943 109 aaKnown RBP3.18□□□□□ -1.9
PTR3YFR029W SDH4P37298 181 aa3.18□□□□□ -1.9
PTR3YFR029W YEL028WP39989 153 aa3.18□□□□□ -1.9
PTR3YFR029W YDR102CQ03864 110 aa3.18□□□□□ -1.9
PTR3YFR029W FCF1Q05498 189 aaPredicted RBP3.18□□□□□ -1.9
PTR3YFR029W SLD7Q08457 257 aa3.18□□□□□ -1.9
PTR3YFR029W STU1P38198 1513 aa3.18□□□□□ -1.9
PTR3YFR029W YAR023CD6VPM8 179 aa3.17□□□□□ -1.9
PTR3YFR029W RFS1P38234 210 aaKnown RBP3.17□□□□□ -1.9
PTR3YFR029W GVP36P40531 326 aaKnown RBP3.17□□□□□ -1.9
PTR3YFR029W SBH1P52870 82 aa3.17□□□□□ -1.9
PTR3YFR029W SRL1Q08673 210 aa3.17□□□□□ -1.9
PTR3YFR029W BPT1P14772 1559 aa3.17□□□□□ -1.9
PTR3YFR029W UBC5P15732 148 aa3.17□□□□□ -1.9
PTR3YFR029W COX10P21592 462 aa3.17□□□□□ -1.9
PTR3YFR029W YBR090CP38253 122 aa3.17□□□□□ -1.9
PTR3YFR029W ERV15P38312 142 aa3.17□□□□□ -1.9
PTR3YFR029W CTR2P38865 189 aa3.17□□□□□ -1.9
PTR3YFR029W YEA6P39953 335 aa3.17□□□□□ -1.9
PTR3YFR029W PHS1P40857 217 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms