RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C GSP2P32836 220 aaKnown RBP1.45□□□□□ -2.18
VAB2YEL005C YKR041WP36134 250 aa1.45□□□□□ -2.18
VAB2YEL005C YHL042WP38729 150 aa1.45□□□□□ -2.18
VAB2YEL005C YHL018WP38744 120 aaPredicted RBP1.45□□□□□ -2.18
VAB2YEL005C HPA3P39979 161 aa1.45□□□□□ -2.18
VAB2YEL005C HYR1P40581 163 aaKnown RBP1.45□□□□□ -2.18
VAB2YEL005C GPI14P47088 403 aaKnown RBP1.45□□□□□ -2.18
VAB2YEL005C XPT1P47165 209 aa1.45□□□□□ -2.18
VAB2YEL005C YLR460CP54007 376 aa1.45□□□□□ -2.18
VAB2YEL005C YLR050CQ12155 161 aaKnown RBP1.45□□□□□ -2.18
VAB2YEL005C YOR015WQ12169 119 aa1.45□□□□□ -2.18
VAB2YEL005C DGK1Q12382 290 aa1.45□□□□□ -2.18
VAB2YEL005C COX8P04039 78 aa1.44□□□□□ -2.18
VAB2YEL005C RAD51P25454 400 aa1.44□□□□□ -2.18
VAB2YEL005C SRP14P38985 146 aa1.44□□□□□ -2.18
VAB2YEL005C RFC2P40348 353 aa1.44□□□□□ -2.18
VAB2YEL005C ALB1P47019 175 aaPredicted RBP1.44□□□□□ -2.18
VAB2YEL005C THG1P53215 237 aaKnown RBP1.44□□□□□ -2.18
VAB2YEL005C RNH202Q05635 350 aa1.44□□□□□ -2.18
VAB2YEL005C DAS2Q12084 232 aa1.44□□□□□ -2.18
VAB2YEL005C PEX11Q12462 236 aa1.44□□□□□ -2.18
VAB2YEL005C CMC2Q3E7A4 109 aa1.44□□□□□ -2.18
VAB2YEL005C SOK1P40317 901 aa1.43□□□□□ -2.18
VAB2YEL005C YIP3P53633 176 aa1.43□□□□□ -2.18
VAB2YEL005C YPR127WQ06494 345 aa1.43□□□□□ -2.18
VAB2YEL005C VAR1P02381 398 aa1.42□□□□□ -2.18
VAB2YEL005C CMD1P06787 147 aaKnown RBP1.42□□□□□ -2.18
VAB2YEL005C RPL35AP0CX84 120 aaKnown RBP1.42□□□□□ -2.18
VAB2YEL005C RPL35BP0CX85 120 aaKnown RBP1.42□□□□□ -2.18
VAB2YEL005C YCR023CP25351 611 aa1.42□□□□□ -2.18
VAB2YEL005C STP22P25604 385 aa1.42□□□□□ -2.18
VAB2YEL005C NUF2P33895 451 aa1.42□□□□□ -2.18
VAB2YEL005C RPB7P34087 171 aa1.42□□□□□ -2.18
VAB2YEL005C YFH7P43591 353 aa1.42□□□□□ -2.18
VAB2YEL005C SBH1P52870 82 aa1.42□□□□□ -2.18
VAB2YEL005C TIM13P53299 105 aa1.42□□□□□ -2.18
VAB2YEL005C VPS28Q02767 242 aa1.42□□□□□ -2.18
VAB2YEL005C DIG2Q03373 323 aaKnown RBP1.42□□□□□ -2.18
VAB2YEL005C UPS3Q04006 179 aa1.42□□□□□ -2.18
VAB2YEL005C GIM5Q04493 163 aa1.42□□□□□ -2.18
VAB2YEL005C ATP20Q12233 115 aa1.42□□□□□ -2.18
VAB2YEL005C HSP30P25619 332 aa1.41□□□□□ -2.18
VAB2YEL005C RRT1P38192 103 aa1.41□□□□□ -2.18
VAB2YEL005C GLR1P41921 483 aaKnown RBP1.41□□□□□ -2.18
VAB2YEL005C PIR1Q03178 341 aa1.41□□□□□ -2.18
VAB2YEL005C RRP17Q04031 235 aaPredicted RBP1.41□□□□□ -2.18
VAB2YEL005C GRE1Q08969 168 aa1.41□□□□□ -2.18
VAB2YEL005C YOR214CQ12282 236 aa1.41□□□□□ -2.18
VAB2YEL005C YFL065CP43539 102 aa1.4□□□□□ -2.19
VAB2YEL005C TTI2P47168 421 aa1.4□□□□□ -2.19
VAB2YEL005C YNL140CP53910 189 aa1.4□□□□□ -2.19
VAB2YEL005C FIT2Q08906 153 aa1.4□□□□□ -2.19
VAB2YEL005C MAK31P23059 88 aa1.39□□□□□ -2.19
VAB2YEL005C YRA2P36036 203 aaKnown RBP RIP-Chip data1.39□□□□□ -2.19not detected
VAB2YEL005C TMA20P89886 181 aaPredicted RBP1.39□□□□□ -2.19
VAB2YEL005C YKR005CQ02203 525 aa1.39□□□□□ -2.19
VAB2YEL005C DML1Q03652 475 aa1.39□□□□□ -2.19
VAB2YEL005C GAL83Q04739 417 aa1.39□□□□□ -2.19
VAB2YEL005C YMR252CQ04814 134 aa1.39□□□□□ -2.19
VAB2YEL005C FAS1P07149 2051 aaKnown RBP1.38□□□□□ -2.19
VAB2YEL005C STF2P16965 84 aa1.38□□□□□ -2.19
VAB2YEL005C YNL200CP40165 246 aaKnown RBP1.38□□□□□ -2.19
VAB2YEL005C YMR007WQ03675 126 aa1.38□□□□□ -2.19
VAB2YEL005C YMR030W-AQ3E760 96 aa1.38□□□□□ -2.19
VAB2YEL005C RAD6P06104 172 aa1.37□□□□□ -2.19
VAB2YEL005C YBL010CP32788 280 aa1.37□□□□□ -2.19
VAB2YEL005C FYV4P38783 130 aaPredicted RBP1.37□□□□□ -2.19
VAB2YEL005C NSE4P43124 402 aa1.37□□□□□ -2.19
VAB2YEL005C SBH2P52871 88 aa1.37□□□□□ -2.19
VAB2YEL005C TLG1Q03322 224 aa1.37□□□□□ -2.19
VAB2YEL005C YHP1Q04116 353 aa1.37□□□□□ -2.19
VAB2YEL005C YOR381W-AQ3E804 55 aa1.37□□□□□ -2.19
VAB2YEL005C FES1P38260 290 aa1.36□□□□□ -2.19
VAB2YEL005C HHT1P61830 136 aa1.36□□□□□ -2.19
VAB2YEL005C MAK3Q03503 176 aa1.36□□□□□ -2.19
VAB2YEL005C UPS1Q05776 175 aa1.36□□□□□ -2.19
VAB2YEL005C FYV12Q08559 129 aa1.36□□□□□ -2.19
VAB2YEL005C YLR053CQ12026 108 aa1.36□□□□□ -2.19
VAB2YEL005C ATG41Q12048 136 aa1.36□□□□□ -2.19
VAB2YEL005C TRM3Q07527 1436 aa1.35□□□□□ -2.19
VAB2YEL005C YHR212W-AP0CX91 67 aa1.35□□□□□ -2.19
VAB2YEL005C UBC6P33296 250 aaPredicted RBP1.35□□□□□ -2.19
VAB2YEL005C YEL067CP39978 195 aa1.35□□□□□ -2.19
VAB2YEL005C PAC10P48363 199 aa1.35□□□□□ -2.19
VAB2YEL005C NQM1P53228 333 aaPredicted RBP1.35□□□□□ -2.19
VAB2YEL005C YLR422WQ06409 1932 aa1.34□□□□□ -2.19
VAB2YEL005C SEN2P16658 377 aa1.34□□□□□ -2.19
VAB2YEL005C YCL042WP25572 119 aa1.34□□□□□ -2.19
VAB2YEL005C UBC8P28263 218 aa1.34□□□□□ -2.19
VAB2YEL005C YEL073CP39974 107 aa1.34□□□□□ -2.19
VAB2YEL005C CCS1P40202 249 aaKnown RBP1.34□□□□□ -2.19
VAB2YEL005C MPM1P40364 252 aa1.34□□□□□ -2.19
VAB2YEL005C MOB1P40484 314 aa1.34□□□□□ -2.19
VAB2YEL005C SOL1P50278 321 aa1.34□□□□□ -2.19
VAB2YEL005C YGL235WP53071 178 aa1.34□□□□□ -2.19
VAB2YEL005C HSK3P69852 69 aa1.34□□□□□ -2.19
VAB2YEL005C YML079WQ03629 201 aa1.34□□□□□ -2.19
VAB2YEL005C SYM1Q06563 197 aa1.34□□□□□ -2.19
VAB2YEL005C HRD1Q08109 551 aa1.34□□□□□ -2.19
VAB2YEL005C COA3Q3E7B2 85 aa1.34□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms