RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C RNQ1P25367 405 aa2.1□□□□□ -2.07
SSN2YDR443C SRP21P32342 167 aa2.1□□□□□ -2.07
SSN2YDR443C YBL081WP38180 368 aaKnown RBP2.1□□□□□ -2.07
SSN2YDR443C TIF34P40217 347 aaKnown RBP2.1□□□□□ -2.07
SSN2YDR443C COS10P52924 374 aa2.1□□□□□ -2.07
SSN2YDR443C FMP49A0A023PZB3 126 aa2.1□□□□□ -2.07
SSN2YDR443C SPO13P23624 291 aa2.1□□□□□ -2.07
SSN2YDR443C LDS1P31379 325 aa2.1□□□□□ -2.07
SSN2YDR443C PTC1P35182 281 aa2.1□□□□□ -2.07
SSN2YDR443C MOB1P40484 314 aa2.1□□□□□ -2.07
SSN2YDR443C APJ1P53940 528 aa2.1□□□□□ -2.07
SSN2YDR443C IDP3P53982 420 aaKnown RBP2.1□□□□□ -2.07
SSN2YDR443C CGI121Q03705 181 aaKnown RBP2.1□□□□□ -2.07
SSN2YDR443C YMR244WQ04018 355 aa2.1□□□□□ -2.07
SSN2YDR443C FMP42Q04991 504 aa2.1□□□□□ -2.07
SSN2YDR443C YDL211CQ12121 372 aa2.1□□□□□ -2.07
SSN2YDR443C MYO1P08964 1928 aa2.1□□□□□ -2.07
SSN2YDR443C BGL2P15703 313 aaKnown RBP2.1□□□□□ -2.07
SSN2YDR443C TSA1P34760 196 aaKnown RBP2.1□□□□□ -2.07
SSN2YDR443C MED6P38782 295 aa2.1□□□□□ -2.07
SSN2YDR443C AVT2P39981 480 aa2.1□□□□□ -2.07
SSN2YDR443C PRE5P40302 234 aaKnown RBP2.1□□□□□ -2.07
SSN2YDR443C AIM11P87275 137 aa2.1□□□□□ -2.07
SSN2YDR443C YDR366CP87287 132 aa2.1□□□□□ -2.07
SSN2YDR443C EMI1Q04406 187 aa2.1□□□□□ -2.07
SSN2YDR443C YPS3Q12303 508 aa2.1□□□□□ -2.07
SSN2YDR443C YBL112CQ3E7Y4 105 aa2.1□□□□□ -2.07
SSN2YDR443C ADH1P00330 348 aaKnown RBP2.09□□□□□ -2.07
SSN2YDR443C CBP6P07253 162 aaPredicted RBP2.09□□□□□ -2.07
SSN2YDR443C YFL067WP43537 175 aa2.09□□□□□ -2.07
SSN2YDR443C NKP2Q06162 153 aa2.09□□□□□ -2.07
SSN2YDR443C RPL21BQ12672 160 aaKnown RBP2.09□□□□□ -2.07
SSN2YDR443C YLR412C-AQ3E742 68 aa2.09□□□□□ -2.07
SSN2YDR443C PUB1P32588 453 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07 RIP-Chip
SSN2YDR443C AIM18P38884 321 aa2.09□□□□□ -2.07
SSN2YDR443C YJL218WP40892 196 aaKnown RBP2.09□□□□□ -2.07
SSN2YDR443C PAC10P48363 199 aa2.09□□□□□ -2.07
SSN2YDR443C AIF1P52923 378 aa2.09□□□□□ -2.07
SSN2YDR443C SDS23P53172 527 aa2.09□□□□□ -2.07
SSN2YDR443C PGA1P53896 198 aa2.09□□□□□ -2.07
SSN2YDR443C INP1Q03694 420 aa2.09□□□□□ -2.07
SSN2YDR443C PHO85P17157 305 aa2.09□□□□□ -2.08
SSN2YDR443C HOT13P36078 116 aa2.09□□□□□ -2.08
SSN2YDR443C YBR063CP38083 404 aa2.09□□□□□ -2.08
SSN2YDR443C GPI2P46961 280 aa2.09□□□□□ -2.08
SSN2YDR443C CRH1P53301 507 aa2.09□□□□□ -2.08
SSN2YDR443C SLD7Q08457 257 aa2.09□□□□□ -2.08
SSN2YDR443C IZH2Q12442 317 aa2.09□□□□□ -2.08
SSN2YDR443C YML100W-AQ8TGT0 57 aa2.09□□□□□ -2.08
SSN2YDR443C UTP30P36144 274 aaKnown RBP2.08□□□□□ -2.08
SSN2YDR443C MIX23P38162 196 aa2.08□□□□□ -2.08
SSN2YDR443C YPL039WQ03080 316 aa2.08□□□□□ -2.08
SSN2YDR443C LPP1Q04396 274 aa2.08□□□□□ -2.08
SSN2YDR443C ATP14Q12349 124 aa2.08□□□□□ -2.08
SSN2YDR443C SEC59P20048 519 aa2.08□□□□□ -2.08
SSN2YDR443C YHL026CP38740 315 aa2.08□□□□□ -2.08
SSN2YDR443C CFD1P40558 293 aa2.08□□□□□ -2.08
SSN2YDR443C YAE1P47118 141 aaPredicted RBP2.08□□□□□ -2.08
SSN2YDR443C TTI2P47168 421 aa2.08□□□□□ -2.08
SSN2YDR443C YGR039WP53225 103 aa2.08□□□□□ -2.08
SSN2YDR443C BUD25P85052 153 aa2.08□□□□□ -2.08
SSN2YDR443C YDR115WQ04598 105 aa2.08□□□□□ -2.08
SSN2YDR443C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
SSN2YDR443C YAL063C-AQ3E791 96 aa2.08□□□□□ -2.08
SSN2YDR443C HTL1Q9URQ5 78 aa2.08□□□□□ -2.08
SSN2YDR443C MAG1P22134 296 aaKnown RBP2.08□□□□□ -2.08
SSN2YDR443C DLS1P40366 167 aa2.08□□□□□ -2.08
SSN2YDR443C YJL028WP47062 111 aa2.08□□□□□ -2.08
SSN2YDR443C NAG1Q8TGN9 163 aa2.08□□□□□ -2.08
SSN2YDR443C SEC17P32602 292 aa2.08□□□□□ -2.08
SSN2YDR443C YIL024CP40543 189 aa2.08□□□□□ -2.08
SSN2YDR443C SNM1P40993 198 aa2.08□□□□□ -2.08
SSN2YDR443C YGL262WP53054 175 aa2.08□□□□□ -2.08
SSN2YDR443C YGL230CP53074 147 aa2.08□□□□□ -2.08
SSN2YDR443C RPL21AQ02753 160 aaKnown RBP2.08□□□□□ -2.08
SSN2YDR443C GRH1Q04410 372 aaKnown RBP2.08□□□□□ -2.08
SSN2YDR443C NIP7Q08962 181 aaKnown RBP2.08□□□□□ -2.08
SSN2YDR443C AYT1Q12226 474 aa2.08□□□□□ -2.08
SSN2YDR443C DGK1Q12382 290 aa2.08□□□□□ -2.08
SSN2YDR443C YDR034W-BQ6Q5X2 51 aa2.08□□□□□ -2.08
SSN2YDR443C YPT31P38555 223 aaKnown RBP2.07□□□□□ -2.08
SSN2YDR443C YEL075CP39972 122 aa2.07□□□□□ -2.08
SSN2YDR443C YER189WP40104 122 aa2.07□□□□□ -2.08
SSN2YDR443C GAT4P40569 121 aa2.07□□□□□ -2.08
SSN2YDR443C RPE1P46969 238 aa2.07□□□□□ -2.08
SSN2YDR443C YNL010WP53981 241 aaKnown RBP2.07□□□□□ -2.08
SSN2YDR443C FYV12Q08559 129 aa2.07□□□□□ -2.08
SSN2YDR443C ERG2P32352 222 aa2.07□□□□□ -2.08
SSN2YDR443C ZRT3P34240 503 aa2.07□□□□□ -2.08
SSN2YDR443C MIC19P43594 170 aa2.07□□□□□ -2.08
SSN2YDR443C YGR015CP53208 328 aa2.07□□□□□ -2.08
SSN2YDR443C DIG2Q03373 323 aaKnown RBP2.07□□□□□ -2.08
SSN2YDR443C YDR524C-BQ3E6R4 66 aa2.07□□□□□ -2.08
SSN2YDR443C CSE2P33308 149 aa2.07□□□□□ -2.08
SSN2YDR443C YKR005CQ02203 525 aa2.07□□□□□ -2.08
SSN2YDR443C YDL180WQ12301 547 aa2.07□□□□□ -2.08
SSN2YDR443C VAR1P02381 398 aa2.06□□□□□ -2.08
SSN2YDR443C TKL2P33315 681 aa2.06□□□□□ -2.08
SSN2YDR443C SBH1P52870 82 aa2.06□□□□□ -2.08
SSN2YDR443C NHP10Q03435 203 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms