RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W CUP1-2P0CX81 61 aa1.02□□□□□ -2.25
MSN5YDR335W YBL059WP34224 193 aa1.02□□□□□ -2.25
MSN5YDR335W YKL075CP36083 450 aa1.02□□□□□ -2.25
MSN5YDR335W MRPL17P36528 281 aa1.02□□□□□ -2.25
MSN5YDR335W YHL026CP38740 315 aa1.02□□□□□ -2.25
MSN5YDR335W RRT13P40042 185 aa1.02□□□□□ -2.25
MSN5YDR335W YIL054WP40524 105 aa1.02□□□□□ -2.25
MSN5YDR335W MRH4P53166 561 aa1.02□□□□□ -2.25
MSN5YDR335W AIM11P87275 137 aa1.02□□□□□ -2.25
MSN5YDR335W LDB18Q07887 179 aa1.02□□□□□ -2.25
MSN5YDR335W HRD1Q08109 551 aa1.02□□□□□ -2.25
MSN5YDR335W COX4P04037 155 aa1.02□□□□□ -2.25
MSN5YDR335W HAP2P06774 265 aa1.02□□□□□ -2.25
MSN5YDR335W YLR156WP0CE96 114 aa1.02□□□□□ -2.25
MSN5YDR335W YLR159WP0CE97 114 aa1.02□□□□□ -2.25
MSN5YDR335W YLR161WP0CE98 114 aa1.02□□□□□ -2.25
MSN5YDR335W UBI4P0CG63 381 aaKnown RBP1.02□□□□□ -2.25
MSN5YDR335W YER135CP40082 130 aa1.02□□□□□ -2.25
MSN5YDR335W YGR015CP53208 328 aa1.02□□□□□ -2.25
MSN5YDR335W APJ1P53940 528 aa1.02□□□□□ -2.25
MSN5YDR335W UIP4Q08926 304 aa1.02□□□□□ -2.25
MSN5YDR335W YER190C-BP0CX94 160 aa1.01□□□□□ -2.25
MSN5YDR335W YEL077W-AP0CX95 160 aa1.01□□□□□ -2.25
MSN5YDR335W YGR296C-BP0CX96 160 aa1.01□□□□□ -2.25
MSN5YDR335W YPL283W-BP0CX97 160 aa1.01□□□□□ -2.25
MSN5YDR335W YPR204C-AP0CX98 160 aa1.01□□□□□ -2.25
MSN5YDR335W HAP3P13434 144 aa1.01□□□□□ -2.25
MSN5YDR335W ILV6P25605 309 aaKnown RBP1.01□□□□□ -2.25
MSN5YDR335W PAN3P36102 679 aaPredicted RBP1.01□□□□□ -2.25
MSN5YDR335W RGI1P40043 161 aaPredicted RBP1.01□□□□□ -2.25
MSN5YDR335W RIO2P40160 425 aaKnown RBP1.01□□□□□ -2.25
MSN5YDR335W APQ12P40532 138 aa1.01□□□□□ -2.25
MSN5YDR335W ATG18P43601 500 aa1.01□□□□□ -2.25
MSN5YDR335W COS10P52924 374 aa1.01□□□□□ -2.25
MSN5YDR335W SDS23P53172 527 aa1.01□□□□□ -2.25
MSN5YDR335W ORM1P53224 222 aa1.01□□□□□ -2.25
MSN5YDR335W CAB4P53332 305 aa1.01□□□□□ -2.25
MSN5YDR335W YDR274CP87283 123 aa1.01□□□□□ -2.25
MSN5YDR335W VPS28Q02767 242 aa1.01□□□□□ -2.25
MSN5YDR335W CGI121Q03705 181 aaKnown RBP1.01□□□□□ -2.25
MSN5YDR335W FAR10Q06001 478 aa1.01□□□□□ -2.25
MSN5YDR335W TMC1Q08422 150 aaPredicted RBP1.01□□□□□ -2.25
MSN5YDR335W NIP7Q08962 181 aaKnown RBP1.01□□□□□ -2.25
MSN5YDR335W EFG1Q3E705 233 aaKnown RBP1.01□□□□□ -2.25
MSN5YDR335W UBR2Q07963 1872 aa1.01□□□□□ -2.25
MSN5YDR335W CCA1P21269 546 aa1.01□□□□□ -2.25
MSN5YDR335W UBC8P28263 218 aa1.01□□□□□ -2.25
MSN5YDR335W ARO7P32178 256 aa1.01□□□□□ -2.25
MSN5YDR335W SPT14P32363 452 aa1.01□□□□□ -2.25
MSN5YDR335W TKL2P33315 681 aa1.01□□□□□ -2.25
MSN5YDR335W YBR220CP38318 560 aa1.01□□□□□ -2.25
MSN5YDR335W YPL073CP40323 161 aa1.01□□□□□ -2.25
MSN5YDR335W MOG1P47123 218 aa1.01□□□□□ -2.25
MSN5YDR335W YGR050CP53231 118 aa1.01□□□□□ -2.25
MSN5YDR335W TIM8P57744 87 aa1.01□□□□□ -2.25
MSN5YDR335W COF1Q03048 143 aaKnown RBP1.01□□□□□ -2.25
MSN5YDR335W CDC7P06243 507 aa1.01□□□□□ -2.25
MSN5YDR335W RAD10P06838 210 aa1.01□□□□□ -2.25
MSN5YDR335W YHR032W-AP0C5N6 59 aa1.01□□□□□ -2.25
MSN5YDR335W NOP1P15646 327 aaKnown RBP1.01□□□□□ -2.25
MSN5YDR335W BET1P22804 142 aa1.01□□□□□ -2.25
MSN5YDR335W FIP1P45976 327 aa1.01□□□□□ -2.25
MSN5YDR335W ARP3P47117 449 aaKnown RBP1.01□□□□□ -2.25
MSN5YDR335W BUD25P85052 153 aa1.01□□□□□ -2.25
MSN5YDR335W YOR020W-AQ3E824 90 aa1.01□□□□□ -2.25
MSN5YDR335W ATR1P13090 542 aa1□□□□□ -2.25
MSN5YDR335W MAG1P22134 296 aaKnown RBP1□□□□□ -2.25
MSN5YDR335W YCR043CP25361 127 aa1□□□□□ -2.25
MSN5YDR335W SEC17P32602 292 aa1□□□□□ -2.25
MSN5YDR335W SFT2P38166 215 aa1□□□□□ -2.25
MSN5YDR335W MED6P38782 295 aa1□□□□□ -2.25
MSN5YDR335W YHR140WP38842 239 aa1□□□□□ -2.25
MSN5YDR335W BNS1P50084 137 aa1□□□□□ -2.25
MSN5YDR335W UBC12P52491 188 aa1□□□□□ -2.25
MSN5YDR335W SCW4P53334 386 aaKnown RBP1□□□□□ -2.25
MSN5YDR335W YNL033WP53964 284 aa1□□□□□ -2.25
MSN5YDR335W YNL019CP53975 284 aa1□□□□□ -2.25
MSN5YDR335W OSH6Q02201 448 aa1□□□□□ -2.25
MSN5YDR335W HPT1Q04178 221 aaKnown RBP1□□□□□ -2.25
MSN5YDR335W LOA1Q06508 300 aa1□□□□□ -2.25
MSN5YDR335W IRC25Q07951 179 aa1□□□□□ -2.25
MSN5YDR335W YLR118CQ12354 227 aa1□□□□□ -2.25
MSN5YDR335W YAL063C-AQ3E791 96 aa1□□□□□ -2.25
MSN5YDR335W SDH3P33421 198 aa1□□□□□ -2.25
MSN5YDR335W ETR1P38071 380 aa1□□□□□ -2.25
MSN5YDR335W GPI18P38211 433 aa1□□□□□ -2.25
MSN5YDR335W HTD2P38790 280 aaKnown RBP1□□□□□ -2.25
MSN5YDR335W YEL075CP39972 122 aa1□□□□□ -2.25
MSN5YDR335W YER189WP40104 122 aa1□□□□□ -2.25
MSN5YDR335W YJL218WP40892 196 aaKnown RBP1□□□□□ -2.25
MSN5YDR335W SFT1P43682 97 aa1□□□□□ -2.25
MSN5YDR335W EST3Q03096 181 aa1□□□□□ -2.25
MSN5YDR335W YML108WQ03759 105 aa1□□□□□ -2.25
MSN5YDR335W VHS1Q03785 461 aa1□□□□□ -2.25
MSN5YDR335W CSN9Q03981 162 aa1□□□□□ -2.25
MSN5YDR335W GRH1Q04410 372 aaKnown RBP1□□□□□ -2.25
MSN5YDR335W UPS1Q05776 175 aa1□□□□□ -2.25
MSN5YDR335W FEX1Q08913 375 aa1□□□□□ -2.25
MSN5YDR335W FEX2Q08991 375 aa1□□□□□ -2.25
MSN5YDR335W YNL162W-AQ3E7A8 72 aa1□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 63.2 ms