RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W YGR149WP48236 432 aa6.66□□□□□ -1.34
NDE2YDL085W OST3P48439 350 aa6.66□□□□□ -1.34
NDE2YDL085W RPN14P53196 417 aa6.66□□□□□ -1.34
NDE2YDL085W HCH1P53834 153 aa6.66□□□□□ -1.34
NDE2YDL085W YOR192C-CQ3E736 78 aa6.66□□□□□ -1.34
NDE2YDL085W RPS22AP0C0W1 130 aaKnown RBP6.65□□□□□ -1.34
NDE2YDL085W URA5P13298 226 aaKnown RBP6.65□□□□□ -1.34
NDE2YDL085W LOC1P43586 204 aaPredicted RBP6.65□□□□□ -1.34
NDE2YDL085W YGR050CP53231 118 aa6.65□□□□□ -1.34
NDE2YDL085W LST7P53237 242 aa6.65□□□□□ -1.34
NDE2YDL085W HSK3P69852 69 aa6.65□□□□□ -1.34
NDE2YDL085W YOL118CQ08259 102 aa6.65□□□□□ -1.34
NDE2YDL085W FYV7Q12247 151 aa6.65□□□□□ -1.34
NDE2YDL085W FMP49A0A023PZB3 126 aa6.65□□□□□ -1.35
NDE2YDL085W HEM4P06174 275 aa6.65□□□□□ -1.35
NDE2YDL085W FCY2P17064 533 aa6.65□□□□□ -1.35
NDE2YDL085W YBL059WP34224 193 aa6.65□□□□□ -1.35
NDE2YDL085W YKL107WP34251 309 aa6.65□□□□□ -1.35
NDE2YDL085W QDR3P38227 689 aa6.65□□□□□ -1.35
NDE2YDL085W YEL057CP39983 233 aa6.65□□□□□ -1.35
NDE2YDL085W YPL077CQ02831 240 aa6.65□□□□□ -1.35
NDE2YDL085W ATX2Q12067 313 aa6.65□□□□□ -1.35
NDE2YDL085W ERG27Q12452 347 aaKnown RBP6.65□□□□□ -1.35
NDE2YDL085W YMR31P19955 123 aa6.64□□□□□ -1.35
NDE2YDL085W ATG15P25641 520 aa6.64□□□□□ -1.35
NDE2YDL085W GAR1P28007 205 aaKnown RBP6.64□□□□□ -1.35
NDE2YDL085W UBC13P52490 153 aa6.64□□□□□ -1.35
NDE2YDL085W ATC1Q04005 294 aa6.64□□□□□ -1.35
NDE2YDL085W ECM18Q04623 453 aa6.64□□□□□ -1.35
NDE2YDL085W STP4Q07351 490 aa6.64□□□□□ -1.35
NDE2YDL085W PIN2Q12057 282 aa6.64□□□□□ -1.35
NDE2YDL085W BOL1Q3E793 110 aa6.64□□□□□ -1.35
NDE2YDL085W VPS63O13549 108 aa6.63□□□□□ -1.35
NDE2YDL085W RPS25BP0C0T4 108 aaKnown RBP6.63□□□□□ -1.35
NDE2YDL085W YOX1P34161 385 aa6.63□□□□□ -1.35
NDE2YDL085W GPI2P46961 280 aa6.63□□□□□ -1.35
NDE2YDL085W HIT1P46973 164 aa6.63□□□□□ -1.35
NDE2YDL085W LPP1Q04396 274 aa6.63□□□□□ -1.35
NDE2YDL085W TMA10Q06177 86 aa6.63□□□□□ -1.35
NDE2YDL085W SNA4Q07549 140 aa6.63□□□□□ -1.35
NDE2YDL085W YPR071WQ12346 211 aa6.63□□□□□ -1.35
NDE2YDL085W RPS25AQ3E792 108 aaPredicted RBP6.63□□□□□ -1.35
NDE2YDL085W SEC16P48415 2195 aaKnown RBP6.63□□□□□ -1.35
NDE2YDL085W ILV5P06168 395 aaKnown RBP6.62□□□□□ -1.35
NDE2YDL085W ROX3P25046 220 aa6.62□□□□□ -1.35
NDE2YDL085W YGL010WP25338 174 aa6.62□□□□□ -1.35
NDE2YDL085W YKL069WP36088 180 aa6.62□□□□□ -1.35
NDE2YDL085W XPT1P47165 209 aa6.62□□□□□ -1.35
NDE2YDL085W YMR007WQ03675 126 aa6.62□□□□□ -1.35
NDE2YDL085W YPS3Q12303 508 aa6.62□□□□□ -1.35
NDE2YDL085W ACC1Q00955 2233 aaKnown RBP6.62□□□□□ -1.35
NDE2YDL085W AIM29P36154 155 aa6.61□□□□□ -1.35
NDE2YDL085W PSD1P39006 500 aa6.61□□□□□ -1.35
NDE2YDL085W WSC2P53832 503 aa6.61□□□□□ -1.35
NDE2YDL085W NAT3Q06504 195 aa6.61□□□□□ -1.35
NDE2YDL085W MRL1Q06815 381 aa6.61□□□□□ -1.35
NDE2YDL085W TRP4P07285 380 aaPredicted RBP6.61□□□□□ -1.35
NDE2YDL085W ATP5P09457 212 aa6.61□□□□□ -1.35
NDE2YDL085W GSP1P32835 219 aaKnown RBP6.61□□□□□ -1.35
NDE2YDL085W GSP2P32836 220 aaKnown RBP6.61□□□□□ -1.35
NDE2YDL085W CYB5P40312 120 aa6.61□□□□□ -1.35
NDE2YDL085W ARP3P47117 449 aaKnown RBP6.61□□□□□ -1.35
NDE2YDL085W LOA1Q06508 300 aa6.61□□□□□ -1.35
NDE2YDL085W ARR3Q06598 404 aa6.61□□□□□ -1.35
NDE2YDL085W USV1Q12132 391 aa6.61□□□□□ -1.35
NDE2YDL085W FOL3Q12676 427 aaPredicted RBP6.61□□□□□ -1.35
NDE2YDL085W YGL258W-AQ3E740 77 aa6.61□□□□□ -1.35
NDE2YDL085W HTB1P02293 131 aaKnown RBP6.6□□□□□ -1.35
NDE2YDL085W HTB2P02294 131 aa6.6□□□□□ -1.35
NDE2YDL085W RPS23AP0CX29 145 aaKnown RBP6.6□□□□□ -1.35
NDE2YDL085W RPS23BP0CX30 145 aa6.6□□□□□ -1.35
NDE2YDL085W HMX1P32339 317 aa6.6□□□□□ -1.35
NDE2YDL085W TCA17P32613 152 aa6.6□□□□□ -1.35
NDE2YDL085W REC104P33323 182 aa6.6□□□□□ -1.35
NDE2YDL085W DAD2P36162 133 aa6.6□□□□□ -1.35
NDE2YDL085W RPB11P38902 120 aa6.6□□□□□ -1.35
NDE2YDL085W PIC2P40035 300 aa6.6□□□□□ -1.35
NDE2YDL085W GON7P46984 123 aa6.6□□□□□ -1.35
NDE2YDL085W CRH1P53301 507 aa6.6□□□□□ -1.35
NDE2YDL085W RFM1Q12192 310 aa6.6□□□□□ -1.35
NDE2YDL085W RNH203Q12338 110 aa6.6□□□□□ -1.35
NDE2YDL085W YDL085C-AQ3E7B7 68 aaKnown RBP6.6□□□□□ -1.35
NDE2YDL085W POR1P04840 283 aaKnown RBP6.59□□□□□ -1.35
NDE2YDL085W RPL9AP05738 191 aaKnown RBP6.59□□□□□ -1.35
NDE2YDL085W SPS18P32572 300 aa6.59□□□□□ -1.35
NDE2YDL085W DER1P38307 211 aa6.59□□□□□ -1.35
NDE2YDL085W CUE1P38428 203 aa6.59□□□□□ -1.35
NDE2YDL085W UIP3P39547 235 aa6.59□□□□□ -1.35
NDE2YDL085W BOR1P53838 576 aa6.59□□□□□ -1.35
NDE2YDL085W SAE3P89114 91 aa6.59□□□□□ -1.35
NDE2YDL085W POM33Q12164 279 aa6.59□□□□□ -1.35
NDE2YDL085W SMT3Q12306 101 aaKnown RBP6.59□□□□□ -1.35
NDE2YDL085W LDS2Q08218 356 aa6.58□□□□□ -1.36
NDE2YDL085W YOR105WQ08504 108 aa6.58□□□□□ -1.36
NDE2YDL085W POC4Q12245 148 aaPredicted RBP6.58□□□□□ -1.36
NDE2YDL085W COX17Q12287 69 aa6.58□□□□□ -1.36
NDE2YDL085W GAT2P40209 560 aa6.58□□□□□ -1.36
NDE2YDL085W RPL9BP51401 191 aaKnown RBP6.58□□□□□ -1.36
NDE2YDL085W RPL21AQ02753 160 aaKnown RBP6.58□□□□□ -1.36
NDE2YDL085W RPL21BQ12672 160 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms