RNA–Protein interactions for RNA: YBR279W

PAF1, Transcript of Component of the Paf1p complex involved in transcription elongation, yeastyeast

Gene PAF1, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAF1YBR279W SNO1Q03144 224 aa2.02□□□□□ -2.09
PAF1YBR279W DIG2Q03373 323 aaKnown RBP2.02□□□□□ -2.09
PAF1YBR279W YMR252CQ04814 134 aa2.02□□□□□ -2.09
PAF1YBR279W YOR015WQ12169 119 aa2.02□□□□□ -2.09
PAF1YBR279W SEC72P39742 193 aaKnown RBP2.01□□□□□ -2.09
PAF1YBR279W SBH1P52870 82 aa2.01□□□□□ -2.09
PAF1YBR279W YCR023CP25351 611 aa2□□□□□ -2.09
PAF1YBR279W PIR1Q03178 341 aa2□□□□□ -2.09
PAF1YBR279W DAS2Q12084 232 aa2□□□□□ -2.09
PAF1YBR279W GCY1P14065 312 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
PAF1YBR279W STP22P25604 385 aa1.99□□□□□ -2.09
PAF1YBR279W JAC1P53193 184 aa1.99□□□□□ -2.09
PAF1YBR279W HPT1Q04178 221 aaKnown RBP1.99□□□□□ -2.09
PAF1YBR279W AQY2P0CD90 149 aa1.98□□□□□ -2.09
PAF1YBR279W TRR1P29509 319 aaKnown RBP1.98□□□□□ -2.09
PAF1YBR279W YKL102CP34249 101 aa1.98□□□□□ -2.09
PAF1YBR279W RRP17Q04031 235 aaPredicted RBP1.98□□□□□ -2.09
PAF1YBR279W GPI17Q04080 534 aa1.98□□□□□ -2.09
PAF1YBR279W ATG38Q05789 226 aaKnown RBP1.98□□□□□ -2.09
PAF1YBR279W BRX1Q08235 291 aaKnown RBP1.98□□□□□ -2.09
PAF1YBR279W DGK1Q12382 290 aa1.98□□□□□ -2.09
PAF1YBR279W YHR212W-AP0CX91 67 aa1.97□□□□□ -2.09
PAF1YBR279W RFC2P40348 353 aa1.97□□□□□ -2.09
PAF1YBR279W POG1P40473 351 aa1.97□□□□□ -2.09
PAF1YBR279W ATP20Q12233 115 aa1.97□□□□□ -2.09
PAF1YBR279W NVJ1P38881 321 aa1.96□□□□□ -2.1
PAF1YBR279W TIM13P53299 105 aa1.96□□□□□ -2.1
PAF1YBR279W VPS28Q02767 242 aa1.96□□□□□ -2.1
PAF1YBR279W PLP1Q04004 230 aa1.96□□□□□ -2.1
PAF1YBR279W HSP30P25619 332 aa1.95□□□□□ -2.1
PAF1YBR279W STF2P16965 84 aa1.94□□□□□ -2.1
PAF1YBR279W YCL042WP25572 119 aa1.94□□□□□ -2.1
PAF1YBR279W RRT1P38192 103 aa1.94□□□□□ -2.1
PAF1YBR279W YEL008WP40001 126 aa1.94□□□□□ -2.1
PAF1YBR279W SBH2P52871 88 aa1.94□□□□□ -2.1
PAF1YBR279W YKR041WP36134 250 aa1.93□□□□□ -2.1
PAF1YBR279W EGD2P38879 174 aaKnown RBP1.93□□□□□ -2.1
PAF1YBR279W YOR214CQ12282 236 aa1.93□□□□□ -2.1
PAF1YBR279W PEX11Q12462 236 aa1.93□□□□□ -2.1
PAF1YBR279W COA3Q3E7B2 85 aa1.93□□□□□ -2.1
PAF1YBR279W MET31Q03081 177 aa1.92□□□□□ -2.1
PAF1YBR279W GAL83Q04739 417 aa1.92□□□□□ -2.1
PAF1YBR279W YPR127WQ06494 345 aa1.92□□□□□ -2.1
PAF1YBR279W FYV12Q08559 129 aa1.92□□□□□ -2.1
PAF1YBR279W YMR030W-AQ3E760 96 aa1.92□□□□□ -2.1
PAF1YBR279W CLG1P35190 452 aa1.91□□□□□ -2.1
PAF1YBR279W XPT1P47165 209 aa1.91□□□□□ -2.1
PAF1YBR279W RPL37AP49166 88 aaKnown RBP1.91□□□□□ -2.1
PAF1YBR279W YLR460CP54007 376 aa1.91□□□□□ -2.1
PAF1YBR279W DML1Q03652 475 aa1.91□□□□□ -2.1
PAF1YBR279W YHP1Q04116 353 aa1.91□□□□□ -2.1
PAF1YBR279W SEN2P16658 377 aa1.91□□□□□ -2.1
PAF1YBR279W YBL010CP32788 280 aa1.91□□□□□ -2.1
PAF1YBR279W HUA1P40325 198 aa1.91□□□□□ -2.1
PAF1YBR279W YGL235WP53071 178 aa1.91□□□□□ -2.1
PAF1YBR279W HHT1P61830 136 aa1.91□□□□□ -2.1
PAF1YBR279W YKR005CQ02203 525 aa1.91□□□□□ -2.1
PAF1YBR279W MAK31P23059 88 aa1.9□□□□□ -2.11
PAF1YBR279W YRA2P36036 203 aaKnown RBP RIP-Chip data1.9□□□□□ -2.11not detected
PAF1YBR279W MAK5P38112 773 aaPredicted RBP1.9□□□□□ -2.11
PAF1YBR279W SRP14P38985 146 aa1.9□□□□□ -2.11
PAF1YBR279W NSE4P43124 402 aa1.9□□□□□ -2.11
PAF1YBR279W TTI2P47168 421 aa1.9□□□□□ -2.11
PAF1YBR279W UBC8P28263 218 aa1.89□□□□□ -2.11
PAF1YBR279W MRPL15P36523 253 aa1.89□□□□□ -2.11
PAF1YBR279W YDR391CQ04170 232 aa1.89□□□□□ -2.11
PAF1YBR279W UPS1Q05776 175 aa1.89□□□□□ -2.11
PAF1YBR279W ATG41Q12048 136 aa1.89□□□□□ -2.11
PAF1YBR279W GLR1P41921 483 aaKnown RBP1.88□□□□□ -2.11
PAF1YBR279W YLR050CQ12155 161 aaKnown RBP1.88□□□□□ -2.11
PAF1YBR279W RAD6P06104 172 aa1.87□□□□□ -2.11
PAF1YBR279W AHT1P29589 182 aa1.87□□□□□ -2.11
PAF1YBR279W NUF2P33895 451 aa1.87□□□□□ -2.11
PAF1YBR279W YBR242WP38331 238 aa1.87□□□□□ -2.11
PAF1YBR279W MPM1P40364 252 aa1.87□□□□□ -2.11
PAF1YBR279W RAD51P25454 400 aa1.86□□□□□ -2.11
PAF1YBR279W YIP3P53633 176 aa1.86□□□□□ -2.11
PAF1YBR279W GRE1Q08969 168 aa1.86□□□□□ -2.11
PAF1YBR279W PST2Q12335 198 aaKnown RBP1.86□□□□□ -2.11
PAF1YBR279W SAC3P46674 1301 aa1.85□□□□□ -2.11
PAF1YBR279W CMD1P06787 147 aaKnown RBP1.85□□□□□ -2.11
PAF1YBR279W VPS51P36116 164 aa1.85□□□□□ -2.11
PAF1YBR279W FYV4P38783 130 aaPredicted RBP1.85□□□□□ -2.11
PAF1YBR279W CCS1P40202 249 aaKnown RBP1.85□□□□□ -2.11
PAF1YBR279W HRD1Q08109 551 aa1.85□□□□□ -2.11
PAF1YBR279W YOR381W-AQ3E804 55 aa1.85□□□□□ -2.11
PAF1YBR279W YNL200CP40165 246 aaKnown RBP1.84□□□□□ -2.12
PAF1YBR279W MOB1P40484 314 aa1.84□□□□□ -2.12
PAF1YBR279W ACC1Q00955 2233 aaKnown RBP1.83□□□□□ -2.12
PAF1YBR279W ETR1P38071 380 aa1.83□□□□□ -2.12
PAF1YBR279W RIM9Q04734 239 aa1.83□□□□□ -2.12
PAF1YBR279W TAR1Q8TGM6 124 aa1.83□□□□□ -2.12
PAF1YBR279W TRM3Q07527 1436 aa1.83□□□□□ -2.12
PAF1YBR279W FAS1P07149 2051 aaKnown RBP1.82□□□□□ -2.12
PAF1YBR279W YEL073CP39974 107 aa1.81□□□□□ -2.12
PAF1YBR279W TMA20P89886 181 aaPredicted RBP1.81□□□□□ -2.12
PAF1YBR279W YML079WQ03629 201 aa1.81□□□□□ -2.12
PAF1YBR279W ELP6Q04868 273 aa1.81□□□□□ -2.12
PAF1YBR279W YPR203WQ08994 102 aa1.81□□□□□ -2.12
PAF1YBR279W CPR5P35176 225 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms