RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W SIM1P40472 476 aa1.79□□□□□ -2.12
NUP170YBL079W AIM24P47127 394 aa1.79□□□□□ -2.12
NUP170YBL079W LST7P53237 242 aa1.79□□□□□ -2.12
NUP170YBL079W ATP23P53722 227 aa1.79□□□□□ -2.12
NUP170YBL079W YDR366CP87287 132 aa1.79□□□□□ -2.12
NUP170YBL079W RDI1Q12434 202 aa1.79□□□□□ -2.12
NUP170YBL079W POM34Q12445 299 aa1.79□□□□□ -2.12
NUP170YBL079W BLM10P43583 2143 aa1.79□□□□□ -2.12
NUP170YBL079W MIR1P23641 311 aaKnown RBP1.79□□□□□ -2.12
NUP170YBL079W RNA15P25299 296 aaPredicted RBP1.79□□□□□ -2.12
NUP170YBL079W AVT5P38176 459 aa1.79□□□□□ -2.12
NUP170YBL079W GDT1P38301 280 aaPredicted RBP1.79□□□□□ -2.12
NUP170YBL079W YPT31P38555 223 aaKnown RBP1.79□□□□□ -2.12
NUP170YBL079W GVP36P40531 326 aaKnown RBP1.79□□□□□ -2.12
NUP170YBL079W GPI2P46961 280 aa1.79□□□□□ -2.12
NUP170YBL079W OST3P48439 350 aa1.79□□□□□ -2.12
NUP170YBL079W UBP8P50102 471 aa1.79□□□□□ -2.12
NUP170YBL079W MRX11Q03079 207 aa1.79□□□□□ -2.12
NUP170YBL079W FCF2Q12035 217 aaPredicted RBP1.79□□□□□ -2.12
NUP170YBL079W ATG5Q12380 294 aa1.79□□□□□ -2.12
NUP170YBL079W RTC6O14464 93 aa1.78□□□□□ -2.12
NUP170YBL079W RPL24AP04449 155 aaKnown RBP1.78□□□□□ -2.12
NUP170YBL079W RPL12AP0CX53 165 aaKnown RBP1.78□□□□□ -2.12
NUP170YBL079W RPL12BP0CX54 165 aa1.78□□□□□ -2.12
NUP170YBL079W YAR068WP39564 161 aa1.78□□□□□ -2.12
NUP170YBL079W ERG28P40030 148 aa1.78□□□□□ -2.12
NUP170YBL079W DOC1P53068 250 aa1.78□□□□□ -2.12
NUP170YBL079W ASI3P53983 676 aa1.78□□□□□ -2.12
NUP170YBL079W MRPS17Q03246 237 aaPredicted RBP1.78□□□□□ -2.12
NUP170YBL079W CCW12Q12127 133 aa1.78□□□□□ -2.12
NUP170YBL079W MET17P06106 444 aa1.78□□□□□ -2.12
NUP170YBL079W RPB3P16370 318 aaKnown RBP1.78□□□□□ -2.12
NUP170YBL079W QCR9P22289 66 aa1.78□□□□□ -2.12
NUP170YBL079W MRPL4P36517 319 aa1.78□□□□□ -2.12
NUP170YBL079W SAP30P38429 201 aa1.78□□□□□ -2.12
NUP170YBL079W YNL208WP40159 199 aaKnown RBP1.78□□□□□ -2.12
NUP170YBL079W JLP2P40206 208 aa1.78□□□□□ -2.12
NUP170YBL079W PKP2P53170 491 aa1.78□□□□□ -2.12
NUP170YBL079W LCL1Q02786 101 aa1.78□□□□□ -2.12
NUP170YBL079W RXT3Q07458 294 aa1.78□□□□□ -2.12
NUP170YBL079W YPL119C-AQ3E751 87 aa1.78□□□□□ -2.12
NUP170YBL079W MEC1P38111 2368 aa1.78□□□□□ -2.12
NUP170YBL079W NOP1P15646 327 aaKnown RBP1.78□□□□□ -2.12
NUP170YBL079W YFL019CP43576 117 aa1.78□□□□□ -2.12
NUP170YBL079W MRPS8Q03799 155 aa1.78□□□□□ -2.12
NUP170YBL079W PHO92Q06390 306 aa1.78□□□□□ -2.12
NUP170YBL079W YLR031WQ07978 186 aa1.78□□□□□ -2.12
NUP170YBL079W YPL264CQ08980 353 aa1.78□□□□□ -2.12
NUP170YBL079W DFM1Q12743 341 aaKnown RBP1.78□□□□□ -2.12
NUP170YBL079W YGL041C-BQ3E750 60 aa1.78□□□□□ -2.12
NUP170YBL079W ARG80P07249 177 aa1.78□□□□□ -2.13
NUP170YBL079W YGR210CP42942 411 aa1.78□□□□□ -2.13
NUP170YBL079W ARP3P47117 449 aaKnown RBP1.78□□□□□ -2.13
NUP170YBL079W TY1A-MR1Q04215 440 aa1.78□□□□□ -2.13
NUP170YBL079W ATX2Q12067 313 aa1.78□□□□□ -2.13
NUP170YBL079W TY1A-BRQ12217 440 aa1.78□□□□□ -2.13
NUP170YBL079W PUT1P09368 476 aa1.77□□□□□ -2.13
NUP170YBL079W ANB1P19211 157 aa1.77□□□□□ -2.13
NUP170YBL079W VHT1P53241 593 aa1.77□□□□□ -2.13
NUP170YBL079W FMP41P53889 259 aaKnown RBP1.77□□□□□ -2.13
NUP170YBL079W ODC2Q99297 307 aa1.77□□□□□ -2.13
NUP170YBL079W GLT1Q12680 2145 aaKnown RBP1.77□□□□□ -2.13
NUP170YBL079W CDC39P25655 2108 aaKnown RBP1.77□□□□□ -2.13
NUP170YBL079W REC104P33323 182 aa1.77□□□□□ -2.13
NUP170YBL079W PDR17P53844 350 aa1.77□□□□□ -2.13
NUP170YBL079W YLR342W-AQ3E810 57 aa1.77□□□□□ -2.13
NUP170YBL079W CAP2P13517 287 aa1.77□□□□□ -2.13
NUP170YBL079W STF2P16965 84 aa1.77□□□□□ -2.13
NUP170YBL079W BDH1P39714 382 aa1.77□□□□□ -2.13
NUP170YBL079W MIC27P50945 234 aa1.77□□□□□ -2.13
NUP170YBL079W FMP48P53233 369 aa1.77□□□□□ -2.13
NUP170YBL079W BOR1P53838 576 aa1.77□□□□□ -2.13
NUP170YBL079W PMP3P87284 55 aa1.77□□□□□ -2.13
NUP170YBL079W IZH1Q03419 316 aa1.77□□□□□ -2.13
NUP170YBL079W FMP42Q04991 504 aa1.77□□□□□ -2.13
NUP170YBL079W HIS3P06633 220 aa1.76□□□□□ -2.13
NUP170YBL079W DDI2P0CH63 225 aa1.76□□□□□ -2.13
NUP170YBL079W DDI3P0CH64 225 aa1.76□□□□□ -2.13
NUP170YBL079W PRE9P23638 258 aaKnown RBP1.76□□□□□ -2.13
NUP170YBL079W AST1P35183 429 aa1.76□□□□□ -2.13
NUP170YBL079W RRF1P38771 230 aa1.76□□□□□ -2.13
NUP170YBL079W RPA14P50106 137 aa1.76□□□□□ -2.13
NUP170YBL079W BUD23P25627 275 aaPredicted RBP1.76□□□□□ -2.13
NUP170YBL079W SLM6P38343 150 aa1.76□□□□□ -2.13
NUP170YBL079W BUL1P48524 976 aa1.76□□□□□ -2.13
NUP170YBL079W FRQ1Q06389 190 aa1.76□□□□□ -2.13
NUP170YBL079W YJR112W-AQ3E743 109 aa1.76□□□□□ -2.13
NUP170YBL079W FMT1P32785 401 aa1.76□□□□□ -2.13
NUP170YBL079W AHP1P38013 176 aaKnown RBP1.76□□□□□ -2.13
NUP170YBL079W PDX3P38075 228 aaKnown RBP1.76□□□□□ -2.13
NUP170YBL079W DIA1P54005 336 aa1.76□□□□□ -2.13
NUP170YBL079W ODC1Q03028 310 aa1.76□□□□□ -2.13
NUP170YBL079W YDR415CQ04033 374 aaPredicted RBP1.76□□□□□ -2.13
NUP170YBL079W MGR3Q04472 501 aa1.76□□□□□ -2.13
NUP170YBL079W SYM1Q06563 197 aa1.76□□□□□ -2.13
NUP170YBL079W RPL16BP26785 198 aaKnown RBP1.76□□□□□ -2.13
NUP170YBL079W YPS1P32329 569 aa1.76□□□□□ -2.13
NUP170YBL079W MIT1P40002 666 aa1.76□□□□□ -2.13
NUP170YBL079W TIM44Q01852 431 aa1.76□□□□□ -2.13
NUP170YBL079W EST3Q03096 181 aa1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms