RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 RIPK2O43353 540 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 CALB1P05937 261 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 IVDP26440 423 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 MAN1A1P33908 653 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 ADCYAP1R1P41586 468 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 PPP2R2AP63151 447 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 CALCOCO2Q13137 446 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 PTK6Q13882 451 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 AMHR2Q16671 573 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 TXNRD3NBQ6F5E7 133 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 JADE1Q6IE81 842 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 PRUNE1Q86TP1 453 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 GPRC5AQ8NFJ5 357 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 TLCD1Q96CP7 247 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 DNAJC17Q9NVM6 304 aaKnown RBP17.98■□□□□ 0.47
PHGDH-229ENST00000641891 AKT3Q9Y243 479 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 PLXNB2O15031 1838 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 A6NNZ2 444 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 NDUFAB1O14561 156 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 ITGBL1O95965 494 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-229ENST00000641891 STAG3L1P0CL83 205 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 KRT10P13645 584 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 CD19P15391 556 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 PHKA2P46019 1235 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 LAMC2Q13753 1193 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 TUBB8Q3ZCM7 444 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 KAZNQ674X7 775 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 PPP1R2P3Q6NXS1 205 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 ARFGAP2Q8N6H7 521 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 EXD1Q8NHP7 514 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 DDX23Q9BUQ8 820 aaKnown RBP17.97■□□□□ 0.47
PHGDH-229ENST00000641891 EPN3Q9H201 632 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 PDZD7Q9H5P4 517 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 SMYD3Q9H7B4 428 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 PRMT7Q9NVM4 692 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-229ENST00000641891 WHRNQ9P202 907 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 HMGXB4Q9UGU5 601 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 CYTH4Q9UIA0 394 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 IVNS1ABPQ9Y6Y0 642 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 PDHXO00330 501 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 ASAP2O43150 1006 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 RARGP13631 454 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 WDR72Q3MJ13 1102 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 ZNF484Q5JVG2 852 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 ZFYVE27Q5T4F4 411 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 RHBDF2Q6PJF5 856 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 HOOK3Q86VS8 718 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 LINC01465Q8N7H1 131 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 EPS8L3Q8TE67 593 aaKnown RBP17.97■□□□□ 0.47
PHGDH-229ENST00000641891 SNF8Q96H20 258 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 PWWP2AQ96N64 755 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 PCDHGC3Q9UN70 934 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 ZSWIM8A7E2V4 1837 aa17.97■□□□□ 0.47
PHGDH-229ENST00000641891 IL18RAPO95256 599 aa17.96■□□□□ 0.47
PHGDH-229ENST00000641891 GH1P01241 217 aa17.96■□□□□ 0.47
PHGDH-229ENST00000641891 KRT1P04264 644 aa17.96■□□□□ 0.47
PHGDH-229ENST00000641891 ITGB3P05106 788 aa17.96■□□□□ 0.47
PHGDH-229ENST00000641891 SLCO1A2P46721 670 aa17.96■□□□□ 0.47
PHGDH-229ENST00000641891 ITGA8P53708 1063 aa17.96■□□□□ 0.47
PHGDH-229ENST00000641891 LACTBP83111 547 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-229ENST00000641891 NFX1Q12986 1120 aaKnown RBP17.96■□□□□ 0.47
PHGDH-229ENST00000641891 SLMAPQ14BN4 828 aa17.96■□□□□ 0.47
PHGDH-229ENST00000641891 PPP1R15BQ5SWA1 713 aa17.96■□□□□ 0.47
PHGDH-229ENST00000641891 DCUN1D2Q6PH85 259 aa17.96■□□□□ 0.47
PHGDH-229ENST00000641891 ERICH1Q86X53 443 aa17.96■□□□□ 0.47
PHGDH-229ENST00000641891 TWNKQ96RR1 684 aa17.96■□□□□ 0.47
PHGDH-229ENST00000641891 PPANQ9NQ55 473 aaKnown RBP17.96■□□□□ 0.47
PHGDH-229ENST00000641891 PNMA3Q9UL41 463 aa17.96■□□□□ 0.47
PHGDH-229ENST00000641891 NEU2Q9Y3R4 380 aa17.96■□□□□ 0.47
PHGDH-229ENST00000641891 GOLGA8SH3BPF8 625 aa17.96■□□□□ 0.46
PHGDH-229ENST00000641891 TRIM66O15016 1216 aa17.96■□□□□ 0.46
PHGDH-229ENST00000641891 CDH5P33151 784 aaPredicted RBP17.96■□□□□ 0.46
PHGDH-229ENST00000641891 PTPN20Q4JDL3 420 aa17.96■□□□□ 0.46
PHGDH-229ENST00000641891 ZNF667Q5HYK9 610 aa17.96■□□□□ 0.46
PHGDH-229ENST00000641891 MFSD7Q6UXD7 560 aa17.96■□□□□ 0.46
PHGDH-229ENST00000641891 ATL2Q8NHH9 583 aa17.96■□□□□ 0.46
PHGDH-229ENST00000641891 GRK7Q8WTQ7 553 aa17.96■□□□□ 0.46
PHGDH-229ENST00000641891 SLITRK1Q96PX8 696 aa17.96■□□□□ 0.46
PHGDH-229ENST00000641891 NFKBIZQ9BYH8 718 aa17.96■□□□□ 0.46
PHGDH-229ENST00000641891 LOC102724159A0A0B4J2E5 919 aa17.95■□□□□ 0.46
PHGDH-229ENST00000641891 BTBD19C9JJ37 291 aa17.95■□□□□ 0.46
PHGDH-229ENST00000641891 MYO1CO00159 1063 aa17.95■□□□□ 0.46
PHGDH-229ENST00000641891 TULP2O00295 520 aa17.95■□□□□ 0.46
PHGDH-229ENST00000641891 GAS8O95995 478 aa17.95■□□□□ 0.46
PHGDH-229ENST00000641891 ATF2P15336 505 aa17.95■□□□□ 0.46
PHGDH-229ENST00000641891 ATF7P17544 494 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-229ENST00000641891 ARF4P18085 180 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-229ENST00000641891 EIF4BP23588 611 aaKnown RBP17.95■□□□□ 0.46
PHGDH-229ENST00000641891 RAD23BP54727 409 aa17.95■□□□□ 0.46
PHGDH-229ENST00000641891 IFI35P80217 286 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-229ENST00000641891 PWP2Q15269 919 aaKnown RBP17.95■□□□□ 0.46
PHGDH-229ENST00000641891 CCNG2Q16589 344 aa17.95■□□□□ 0.46
PHGDH-229ENST00000641891 PPTC7Q8NI37 304 aa17.95■□□□□ 0.46
PHGDH-229ENST00000641891 MDM1Q8TC05 714 aa17.95■□□□□ 0.46
PHGDH-229ENST00000641891 C16orf70Q9BSU1 422 aa17.95■□□□□ 0.46
PHGDH-229ENST00000641891 BCO2Q9BYV7 579 aa17.95■□□□□ 0.46
PHGDH-229ENST00000641891 KATNBL1Q9H079 304 aa17.95■□□□□ 0.46
PHGDH-229ENST00000641891 FAM107BQ9H098 131 aa17.95■□□□□ 0.46
PHGDH-229ENST00000641891 CDC42EP4Q9H3Q1 356 aaKnown RBP17.95■□□□□ 0.46
PHGDH-229ENST00000641891 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms