RNA–Protein interactions for RNA: ENST00000640483.1

CACNA1D-230, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5

Gene CACNA1D, Length 5,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-230ENST00000640483 USP33Q8TEY7 942 aa9.8□□□□□ -0.84
CACNA1D-230ENST00000640483 CPA5Q8WXQ8 436 aa9.8□□□□□ -0.84
CACNA1D-230ENST00000640483 KRT35Q92764 455 aa9.8□□□□□ -0.84
CACNA1D-230ENST00000640483 A0A087WZ62 844 aa9.8□□□□□ -0.84
CACNA1D-230ENST00000640483 KRT14P02533 472 aa9.8□□□□□ -0.84
CACNA1D-230ENST00000640483 GPS1Q13098 491 aa9.8□□□□□ -0.84
CACNA1D-230ENST00000640483 MMS22LQ6ZRQ5 1243 aa9.8□□□□□ -0.84
CACNA1D-230ENST00000640483 ZC3H18Q86VM9 953 aaKnown RBP9.8□□□□□ -0.84
CACNA1D-230ENST00000640483 MYRIPQ8NFW9 859 aa9.8□□□□□ -0.84
CACNA1D-230ENST00000640483 WNK4Q96J92 1243 aa9.8□□□□□ -0.84
CACNA1D-230ENST00000640483 KIF2CQ99661 725 aa9.8□□□□□ -0.84
CACNA1D-230ENST00000640483 FDXACB1Q9BRP7 624 aaPredicted RBP9.8□□□□□ -0.84
CACNA1D-230ENST00000640483 DNAJC17Q9NVM6 304 aaKnown RBP9.8□□□□□ -0.84
CACNA1D-230ENST00000640483 RHOBTB3O94955 611 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 GARTP22102 1010 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 ZNF410Q86VK4 478 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 RIOX2Q8IUF8 465 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 PDZD8Q8NEN9 1154 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 SPATA18Q8TC71 538 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 MCEEQ96PE7 176 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 TINF2Q9BSI4 451 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 PDE11AQ9HCR9 933 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 MED4Q9NPJ6 270 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 GTSE1Q9NYZ3 720 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 UVRAGQ9P2Y5 699 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 STK38LQ9Y2H1 464 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 POMCP01189 267 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 SERPIND1P05546 499 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 SLCO1A2P46721 670 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 CREMQ03060 361 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 ADCY2Q08462 1091 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 MAP2K5Q13163 448 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 ART3Q13508 389 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 CAPS2Q9BXY5 557 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 Q9H521 79 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 CHST12Q9NRB3 414 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 GGT7Q9UJ14 662 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 KCNN4O15554 427 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 NCF2P19878 526 aaPredicted RBP9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 LAMTOR4Q0VGL1 99 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 APOBEC3HQ6NTF7 200 aaKnown RBP9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 GPAT2Q6NUI2 795 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 PRR23CQ6ZRP0 262 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 REPS2Q8NFH8 660 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 GPR63Q9BZJ6 419 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 C6orf203Q9P0P8 240 aaPredicted RBP9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 FBXO10Q9UK96 956 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 PCDHB2Q9Y5E7 798 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 SPTLC1O15269 473 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 ACSL3O95573 720 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 ASS1P00966 412 aaKnown RBP9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 ERVK-10P10266 1014 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 CHRNA3P32297 505 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 PDK1Q15118 436 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 AMHR2Q16671 573 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 C6orf118Q5T5N4 469 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 CARNMT1Q8N4J0 409 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 HASPINQ8TF76 798 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 MRIQ9BWK5 157 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 KCNQ5Q9NR82 932 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 KIAA1257Q9ULG3 409 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 TTC7AQ9ULT0 858 aaPredicted RBP9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 SPACA6W5XKT8 324 aa9.79□□□□□ -0.84
CACNA1D-230ENST00000640483 COL14A1Q05707 1796 aaKnown RBP9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 FAM47DPA6NHR8 397 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 CASTOR2A6NHX0 329 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 NDUFS3O75489 264 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 BRD2P25440 801 aaKnown RBP9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 ADCYAP1R1P41586 468 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 NAA25Q14CX7 972 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 ZNF697Q5TEC3 545 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 CATSPERGQ6ZRH7 1159 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 C4orf19Q8IY42 314 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 HPS3Q969F9 1004 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 RNPC3Q96LT9 517 aaKnown RBP9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 EFHD1Q9BUP0 239 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 FAM129AQ9BZQ8 928 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 TRIM15Q9C019 465 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 UXTQ9UBK9 157 aaPredicted RBP9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 SYNPO2Q9UMS6 1093 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 SUPT3HB4E1H0 165 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 LZTS3O60299 673 aaPredicted RBP9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 GTF2H1P32780 548 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 TBC1D1Q86TI0 1168 aaPredicted RBP9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 CRLF3Q8IUI8 442 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 CCDC124Q96CT7 223 aaKnown RBP9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 RPRD1AQ96P16 312 aaPredicted RBP9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 CNOT10Q9H9A5 744 aaKnown RBP9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 CASS4Q9NQ75 786 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 AIPL1Q9NZN9 384 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 PLA2G4CQ9UP65 541 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 PKP3Q9Y446 797 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 PCDHB5Q9Y5E4 795 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 CTNNB1P35222 781 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 ETFBP38117 255 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 PDAP1Q13442 181 aaKnown RBP9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 TRAPPC11Q7Z392 1133 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 HDDC3Q8N4P3 179 aa9.78□□□□□ -0.84
CACNA1D-230ENST00000640483 DDI1Q8WTU0 396 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms