RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 CTGFP29279 349 aa13□□□□□ -0.33
PAX6-261ENST00000639943 RAP1GAPP47736 663 aa13□□□□□ -0.33
PAX6-261ENST00000639943 CARSP49589 748 aaKnown RBP13□□□□□ -0.33
PAX6-261ENST00000639943 CUL1Q13616 776 aa13□□□□□ -0.33
PAX6-261ENST00000639943 MFSD14CQ5VZR4 134 aa13□□□□□ -0.33
PAX6-261ENST00000639943 SND1Q7KZF4 910 aaKnown RBP eCLIP13□□□□□ -0.33
PAX6-261ENST00000639943 C7orf31Q8N865 590 aa13□□□□□ -0.33
PAX6-261ENST00000639943 C1orf131Q8NDD1 294 aaKnown RBP13□□□□□ -0.33
PAX6-261ENST00000639943 FEZF2Q8TBJ5 459 aa13□□□□□ -0.33
PAX6-261ENST00000639943 PPP1R13LQ8WUF5 828 aa13□□□□□ -0.33
PAX6-261ENST00000639943 CASKIN2Q8WXE0 1202 aa13□□□□□ -0.33
PAX6-261ENST00000639943 IFT81Q8WYA0 676 aa13□□□□□ -0.33
PAX6-261ENST00000639943 MFRPQ9BY79 579 aa13□□□□□ -0.33
PAX6-261ENST00000639943 SDCBP2Q9H190 292 aa13□□□□□ -0.33
PAX6-261ENST00000639943 LHX5Q9H2C1 402 aa13□□□□□ -0.33
PAX6-261ENST00000639943 SNTG2Q9NY99 539 aa13□□□□□ -0.33
PAX6-261ENST00000639943 HPCAL4Q9UM19 191 aa13□□□□□ -0.33
PAX6-261ENST00000639943 PYGMP11217 842 aa12.99□□□□□ -0.33
PAX6-261ENST00000639943 CD19P15391 556 aa12.99□□□□□ -0.33
PAX6-261ENST00000639943 RAD23BP54727 409 aa12.99□□□□□ -0.33
PAX6-261ENST00000639943 CDH8P55286 799 aa12.99□□□□□ -0.33
PAX6-261ENST00000639943 LLGL2Q6P1M3 1020 aa12.99□□□□□ -0.33
PAX6-261ENST00000639943 CPNE8Q86YQ8 564 aa12.99□□□□□ -0.33
PAX6-261ENST00000639943 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.99□□□□□ -0.33
PAX6-261ENST00000639943 TRIM7Q9C029 511 aa12.99□□□□□ -0.33
PAX6-261ENST00000639943 TRIM6Q9C030 488 aaPredicted RBP12.99□□□□□ -0.33
PAX6-261ENST00000639943 SMYD3Q9H7B4 428 aa12.99□□□□□ -0.33
PAX6-261ENST00000639943 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.99□□□□□ -0.33
PAX6-261ENST00000639943 AMACRQ9UHK6 382 aa12.99□□□□□ -0.33
PAX6-261ENST00000639943 ZSCAN5CA6NGD5 496 aaPredicted RBP12.99□□□□□ -0.33
PAX6-261ENST00000639943 BHMG1C9JSJ3 638 aaPredicted RBP12.99□□□□□ -0.33
PAX6-261ENST00000639943 CILPO75339 1184 aa12.99□□□□□ -0.33
PAX6-261ENST00000639943 ALDH1A1P00352 501 aa12.99□□□□□ -0.33
PAX6-261ENST00000639943 HOXC8P31273 242 aa12.99□□□□□ -0.33
PAX6-261ENST00000639943 PSMC4P43686 418 aa12.99□□□□□ -0.33
PAX6-261ENST00000639943 CRYBB1P53674 252 aaPredicted RBP12.99□□□□□ -0.33
PAX6-261ENST00000639943 MYO1EQ12965 1108 aa12.99□□□□□ -0.33
PAX6-261ENST00000639943 SNX17Q15036 470 aa12.99□□□□□ -0.33
PAX6-261ENST00000639943 NBPF20Q3BBV1 942 aa12.99□□□□□ -0.33
PAX6-261ENST00000639943 ERICH1Q86X53 443 aa12.99□□□□□ -0.33
PAX6-261ENST00000639943 SNX27Q96L92 541 aa12.99□□□□□ -0.33
PAX6-261ENST00000639943 EIF2AQ9BY44 585 aaKnown RBP12.99□□□□□ -0.33
PAX6-261ENST00000639943 PLEKHA4Q9H4M7 779 aa12.99□□□□□ -0.33
PAX6-261ENST00000639943 MTUS1Q9ULD2 1270 aa12.99□□□□□ -0.33
PAX6-261ENST00000639943 NFU1Q9UMS0 254 aa12.99□□□□□ -0.33
PAX6-261ENST00000639943 ESYT3A0FGR9 886 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 TLR3O15455 904 aaKnown RBP12.98□□□□□ -0.33
PAX6-261ENST00000639943 C6orf222P0C671 652 aaPredicted RBP12.98□□□□□ -0.33
PAX6-261ENST00000639943 OAS2P29728 719 aaKnown RBP12.98□□□□□ -0.33
PAX6-261ENST00000639943 MAN1A1P33908 653 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 GUCY2FP51841 1108 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 GJA9P57773 515 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 ZNF200P98182 395 aaPredicted RBP12.98□□□□□ -0.33
PAX6-261ENST00000639943 TAP1Q03518 808 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 DHX34Q14147 1143 aaKnown RBP12.98□□□□□ -0.33
PAX6-261ENST00000639943 AADACL2Q6P093 401 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 ADAT2Q7Z6V5 191 aaKnown RBP12.98□□□□□ -0.33
PAX6-261ENST00000639943 SLC13A5Q86YT5 568 aaPredicted RBP12.98□□□□□ -0.33
PAX6-261ENST00000639943 SLC4A11Q8NBS3 891 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 TRPV1Q8NER1 839 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 TMEM176AQ96HP8 235 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 GDAP1L1Q96MZ0 367 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 IP6K2Q9UHH9 426 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 STRIP2Q9ULQ0 834 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 UTP11Q9Y3A2 253 aaKnown RBP12.98□□□□□ -0.33
PAX6-261ENST00000639943 NR2E1Q9Y466 385 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 PSTPIP1O43586 416 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 PHF2O75151 1096 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 CYBAP13498 195 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 CHRNA3P32297 505 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 PTPN11Q06124 597 aaPredicted RBP12.98□□□□□ -0.33
PAX6-261ENST00000639943 HSP90B2PQ58FF3 399 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 TAF2Q6P1X5 1199 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 DNAJC24Q6P3W2 148 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 TMEM130Q8N3G9 435 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 WDTC1Q8N5D0 677 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 BEST2Q8NFU1 509 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 WHAMMQ8TF30 809 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 RUNDC3BQ96NL0 473 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 ZIC5Q96T25 663 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 MTG1Q9BT17 334 aaPredicted RBP12.98□□□□□ -0.33
PAX6-261ENST00000639943 SPC25Q9HBM1 224 aa12.98□□□□□ -0.33
PAX6-261ENST00000639943 BARX2Q9UMQ3 279 aaPredicted RBP12.98□□□□□ -0.33
PAX6-261ENST00000639943 PDCD11Q14690 1871 aaKnown RBP12.98□□□□□ -0.33
PAX6-261ENST00000639943 FAM187AA6NFU0 413 aa12.97□□□□□ -0.33
PAX6-261ENST00000639943 TMEM88BA6NKF7 163 aa12.97□□□□□ -0.33
PAX6-261ENST00000639943 AARSP49588 968 aaKnown RBP eCLIP12.97□□□□□ -0.33
PAX6-261ENST00000639943 GABPB1Q06547 395 aaPredicted RBP12.97□□□□□ -0.33
PAX6-261ENST00000639943 INCA1Q0VD86 236 aa12.97□□□□□ -0.33
PAX6-261ENST00000639943 DENND1BQ6P3S1 775 aa12.97□□□□□ -0.33
PAX6-261ENST00000639943 MAIP1Q8WWC4 291 aa12.97□□□□□ -0.33
PAX6-261ENST00000639943 TSPAN18Q96SJ8 248 aa12.97□□□□□ -0.33
PAX6-261ENST00000639943 ELOVL4Q9GZR5 314 aa12.97□□□□□ -0.33
PAX6-261ENST00000639943 RAB17Q9H0T7 212 aa12.97□□□□□ -0.33
PAX6-261ENST00000639943 ERVK-5Q9HDB9 667 aa12.97□□□□□ -0.33
PAX6-261ENST00000639943 MED4Q9NPJ6 270 aa12.97□□□□□ -0.33
PAX6-261ENST00000639943 PIN4Q9Y237 131 aaKnown RBP12.97□□□□□ -0.33
PAX6-261ENST00000639943 SCN10AQ9Y5Y9 1956 aa12.97□□□□□ -0.33
PAX6-261ENST00000639943 TCRBV5S1A1TA0A578 114 aa12.97□□□□□ -0.33
PAX6-261ENST00000639943 TMEM191CA6NGB0 347 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms