RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 CDH5P33151 784 aaPredicted RBP22.8■■□□□ 1.24
CLN6-224ENST00000638076 MDH1P40925 334 aaKnown RBP22.8■■□□□ 1.24
CLN6-224ENST00000638076 ZNF252P-AS1Q0IIN9 211 aa22.8■■□□□ 1.24
CLN6-224ENST00000638076 SLC29A2Q14542 456 aa22.8■■□□□ 1.24
CLN6-224ENST00000638076 ZNF667Q5HYK9 610 aa22.8■■□□□ 1.24
CLN6-224ENST00000638076 JADE1Q6IE81 842 aa22.8■■□□□ 1.24
CLN6-224ENST00000638076 DCUN1D2Q6PH85 259 aa22.8■■□□□ 1.24
CLN6-224ENST00000638076 GRK7Q8WTQ7 553 aa22.8■■□□□ 1.24
CLN6-224ENST00000638076 CCDC114Q96M63 670 aa22.8■■□□□ 1.24
CLN6-224ENST00000638076 FAM129AQ9BZQ8 928 aa22.8■■□□□ 1.24
CLN6-224ENST00000638076 PDZD7Q9H5P4 517 aa22.8■■□□□ 1.24
CLN6-224ENST00000638076 KLHL11Q9NVR0 708 aa22.8■■□□□ 1.24
CLN6-224ENST00000638076 MGAMO43451 1857 aa22.79■■□□□ 1.24
CLN6-224ENST00000638076 CCL15-CCL14A0A0B4J2E2 113 aa22.79■■□□□ 1.24
CLN6-224ENST00000638076 RBM47A0AV96 593 aaKnown RBP22.79■■□□□ 1.24
CLN6-224ENST00000638076 MEFVO15553 781 aaPredicted RBP22.79■■□□□ 1.24
CLN6-224ENST00000638076 MCF2P10911 925 aa22.79■■□□□ 1.24
CLN6-224ENST00000638076 CD19P15391 556 aa22.79■■□□□ 1.24
CLN6-224ENST00000638076 TCF4P15884 667 aa22.79■■□□□ 1.24
CLN6-224ENST00000638076 FGFR4P22455 802 aa22.79■■□□□ 1.24
CLN6-224ENST00000638076 TNFAIP2Q03169 654 aa22.79■■□□□ 1.24
CLN6-224ENST00000638076 SLMAPQ14BN4 828 aa22.79■■□□□ 1.24
CLN6-224ENST00000638076 CCL15Q16663 113 aa22.79■■□□□ 1.24
CLN6-224ENST00000638076 ATP13A4Q4VNC1 1196 aa22.79■■□□□ 1.24
CLN6-224ENST00000638076 CYP4A22Q5TCH4 519 aa22.79■■□□□ 1.24
CLN6-224ENST00000638076 ERICH1Q86X53 443 aa22.79■■□□□ 1.24
CLN6-224ENST00000638076 IFNLR1Q8IU57 520 aaPredicted RBP22.79■■□□□ 1.24
CLN6-224ENST00000638076 EMID1Q96A84 441 aaPredicted RBP22.79■■□□□ 1.24
CLN6-224ENST00000638076 C16orf70Q9BSU1 422 aa22.79■■□□□ 1.24
CLN6-224ENST00000638076 KATNBL1Q9H079 304 aa22.79■■□□□ 1.24
CLN6-224ENST00000638076 WHRNQ9P202 907 aa22.79■■□□□ 1.24
CLN6-224ENST00000638076 CLEC11AQ9Y240 323 aa22.79■■□□□ 1.24
CLN6-224ENST00000638076 PLXNA1Q9UIW2 1896 aa22.79■■□□□ 1.24
CLN6-224ENST00000638076 LSP1P33241 339 aa22.79■■□□□ 1.24
CLN6-224ENST00000638076 CDH8P55286 799 aa22.79■■□□□ 1.24
CLN6-224ENST00000638076 TRIP13Q15645 432 aaPredicted RBP22.79■■□□□ 1.24
CLN6-224ENST00000638076 UBAP2Q5T6F2 1119 aaKnown RBP22.79■■□□□ 1.24
CLN6-224ENST00000638076 ATL2Q8NHH9 583 aa22.79■■□□□ 1.24
CLN6-224ENST00000638076 FAM118BQ9BPY3 351 aa22.79■■□□□ 1.24
CLN6-224ENST00000638076 BCO2Q9BYV7 579 aa22.79■■□□□ 1.24
CLN6-224ENST00000638076 FEZ2Q9UHY8 353 aaPredicted RBP22.79■■□□□ 1.24
CLN6-224ENST00000638076 IQCA1LA6NCM1 817 aa22.78■■□□□ 1.24
CLN6-224ENST00000638076 DCDC2CA8MYV0 355 aa22.78■■□□□ 1.24
CLN6-224ENST00000638076 F8VP50 259 aa22.78■■□□□ 1.24
CLN6-224ENST00000638076 TP73O15350 636 aa22.78■■□□□ 1.24
CLN6-224ENST00000638076 STRNO43815 780 aa22.78■■□□□ 1.24
CLN6-224ENST00000638076 SNAI1O95863 264 aaPredicted RBP22.78■■□□□ 1.24
CLN6-224ENST00000638076 GAS8O95995 478 aa22.78■■□□□ 1.24
CLN6-224ENST00000638076 ITGB3P05106 788 aa22.78■■□□□ 1.24
CLN6-224ENST00000638076 RARGP13631 454 aa22.78■■□□□ 1.24
CLN6-224ENST00000638076 MAGOHP61326 146 aaKnown RBP22.78■■□□□ 1.24
CLN6-224ENST00000638076 OGDHQ02218 1023 aa22.78■■□□□ 1.24
CLN6-224ENST00000638076 PTK6Q13882 451 aa22.78■■□□□ 1.24
CLN6-224ENST00000638076 ZFYVE27Q5T4F4 411 aa22.78■■□□□ 1.24
CLN6-224ENST00000638076 DENND1BQ6P3S1 775 aa22.78■■□□□ 1.24
CLN6-224ENST00000638076 SYDE1Q6ZW31 735 aaPredicted RBP22.78■■□□□ 1.24
CLN6-224ENST00000638076 HOOK3Q86VS8 718 aa22.78■■□□□ 1.24
CLN6-224ENST00000638076 HOMER3Q9NSC5 361 aa22.78■■□□□ 1.24
CLN6-224ENST00000638076 PLXNB2O15031 1838 aa22.78■■□□□ 1.24
CLN6-224ENST00000638076 H3BRB1 525 aa22.77■■□□□ 1.24
CLN6-224ENST00000638076 ARF4P18085 180 aaPredicted RBP22.77■■□□□ 1.24
CLN6-224ENST00000638076 GTF2A2P52657 109 aa22.77■■□□□ 1.24
CLN6-224ENST00000638076 PPARDQ03181 441 aa22.77■■□□□ 1.24
CLN6-224ENST00000638076 CCNG2Q16589 344 aa22.77■■□□□ 1.24
CLN6-224ENST00000638076 PPP1R15BQ5SWA1 713 aa22.77■■□□□ 1.24
CLN6-224ENST00000638076 MTHFD1LQ6UB35 978 aa22.77■■□□□ 1.24
CLN6-224ENST00000638076 CCDC25Q86WR0 208 aa22.77■■□□□ 1.24
CLN6-224ENST00000638076 TUT1Q9H6E5 874 aaKnown RBP22.77■■□□□ 1.24
CLN6-224ENST00000638076 SLC45A1Q9Y2W3 748 aa22.77■■□□□ 1.24
CLN6-224ENST00000638076 PI4K2BG5E9Z4 385 aa22.77■■□□□ 1.24
CLN6-224ENST00000638076 CAND2O75155 1236 aa22.77■■□□□ 1.24
CLN6-224ENST00000638076 CCT5P48643 541 aa22.77■■□□□ 1.24
CLN6-224ENST00000638076 NFX1Q12986 1120 aaKnown RBP22.77■■□□□ 1.24
CLN6-224ENST00000638076 MAP1SQ66K74 1059 aaPredicted RBP22.77■■□□□ 1.24
CLN6-224ENST00000638076 C3orf20Q8ND61 904 aa22.77■■□□□ 1.24
CLN6-224ENST00000638076 NLRP7Q8WX94 980 aa22.77■■□□□ 1.24
CLN6-224ENST00000638076 BRI3BPQ8WY22 251 aa22.77■■□□□ 1.24
CLN6-224ENST00000638076 SNF8Q96H20 258 aa22.77■■□□□ 1.24
CLN6-224ENST00000638076 SDCBP2Q9H190 292 aa22.77■■□□□ 1.24
CLN6-224ENST00000638076 RIPK2O43353 540 aa22.76■■□□□ 1.23
CLN6-224ENST00000638076 ITIH2P19823 946 aa22.76■■□□□ 1.23
CLN6-224ENST00000638076 IVDP26440 423 aa22.76■■□□□ 1.23
CLN6-224ENST00000638076 PPP2R2AP63151 447 aa22.76■■□□□ 1.23
CLN6-224ENST00000638076 ORC1Q13415 861 aa22.76■■□□□ 1.23
CLN6-224ENST00000638076 ZNF467Q7Z7K2 595 aaPredicted RBP22.76■■□□□ 1.23
CLN6-224ENST00000638076 DPP9Q86TI2 863 aa22.76■■□□□ 1.23
CLN6-224ENST00000638076 PNMA8AQ86V59 439 aaPredicted RBP22.76■■□□□ 1.23
CLN6-224ENST00000638076 SMYD3Q9H7B4 428 aa22.76■■□□□ 1.23
CLN6-224ENST00000638076 SLC12A6Q9UHW9 1150 aa22.76■■□□□ 1.23
CLN6-224ENST00000638076 COL1A2P08123 1366 aa22.76■■□□□ 1.23
CLN6-224ENST00000638076 MED7O43513 233 aa22.76■■□□□ 1.23
CLN6-224ENST00000638076 CETN2P41208 172 aa22.76■■□□□ 1.23
CLN6-224ENST00000638076 RAD23BP54727 409 aa22.76■■□□□ 1.23
CLN6-224ENST00000638076 TAP1Q03518 808 aa22.76■■□□□ 1.23
CLN6-224ENST00000638076 SLC10A6Q3KNW5 377 aa22.76■■□□□ 1.23
CLN6-224ENST00000638076 RCOR2Q8IZ40 523 aa22.76■■□□□ 1.23
CLN6-224ENST00000638076 LCMT1Q9UIC8 334 aa22.76■■□□□ 1.23
CLN6-224ENST00000638076 GCLCP48506 637 aaPredicted RBP22.75■■□□□ 1.23
CLN6-224ENST00000638076 PTPN20Q4JDL3 420 aa22.75■■□□□ 1.23
CLN6-224ENST00000638076 KAZNQ674X7 775 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms