RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 TMEM161BQ8NDZ6 487 aa21.3■■□□□ 1
CACNA1A-243ENST00000637616 AVENQ9NQS1 362 aaPredicted RBP21.3■■□□□ 1
CACNA1A-243ENST00000637616 C1orf112Q9NSG2 853 aa21.3■■□□□ 1
CACNA1A-243ENST00000637616 IVNS1ABPQ9Y6Y0 642 aa21.3■■□□□ 1
CACNA1A-243ENST00000637616 TBX10O75333 385 aa21.3■■□□□ 1
CACNA1A-243ENST00000637616 FESP07332 822 aa21.3■■□□□ 1
CACNA1A-243ENST00000637616 CETN2P41208 172 aa21.3■■□□□ 1
CACNA1A-243ENST00000637616 ZBTB16Q05516 673 aa21.3■■□□□ 1
CACNA1A-243ENST00000637616 WDR72Q3MJ13 1102 aa21.3■■□□□ 1
CACNA1A-243ENST00000637616 KATNAL2Q8IYT4 538 aa21.3■■□□□ 1
CACNA1A-243ENST00000637616 ANKRD27Q96NW4 1050 aa21.3■■□□□ 1
CACNA1A-243ENST00000637616 HOMER2Q9NSB8 354 aa21.3■■□□□ 1
CACNA1A-243ENST00000637616 PSMC3IPQ9P2W1 217 aaPredicted RBP21.3■■□□□ 1
CACNA1A-243ENST00000637616 GSC2O15499 205 aa21.29■■□□□ 1
CACNA1A-243ENST00000637616 ATP9AO75110 1047 aa21.29■■□□□ 1
CACNA1A-243ENST00000637616 KRT1P04264 644 aa21.29■■□□□ 1
CACNA1A-243ENST00000637616 CYP24A1Q07973 514 aa21.29■■□□□ 1
CACNA1A-243ENST00000637616 NGLY1Q96IV0 654 aa21.29■■□□□ 1
CACNA1A-243ENST00000637616 RIT2Q99578 217 aa21.29■■□□□ 1
CACNA1A-243ENST00000637616 DDX50Q9BQ39 737 aaKnown RBP21.29■■□□□ 1
CACNA1A-243ENST00000637616 ANKFY1Q9P2R3 1169 aa21.29■■□□□ 1
CACNA1A-243ENST00000637616 SIPA1L1O43166 1804 aa21.29■■□□□ 1
CACNA1A-243ENST00000637616 TRAFD1O14545 582 aaPredicted RBP21.29■■□□□ 1
CACNA1A-243ENST00000637616 POLE2P56282 527 aa21.29■■□□□ 1
CACNA1A-243ENST00000637616 ALCAMQ13740 583 aa21.29■■□□□ 1
CACNA1A-243ENST00000637616 ANKRD22Q5VYY1 191 aa21.29■■□□□ 1
CACNA1A-243ENST00000637616 TMEM270Q6UE05 265 aa21.29■■□□□ 1
CACNA1A-243ENST00000637616 FBXO41Q8TF61 875 aa21.29■■□□□ 1
CACNA1A-243ENST00000637616 FAM136AQ96C01 138 aa21.29■■□□□ 1
CACNA1A-243ENST00000637616 STOML1Q9UBI4 398 aa21.29■■□□□ 1
CACNA1A-243ENST00000637616 PCDHB2Q9Y5E7 798 aa21.29■■□□□ 1
CACNA1A-243ENST00000637616 F8VP50 259 aa21.28■■□□□ 1
CACNA1A-243ENST00000637616 NFIBO00712 420 aa21.28■■□□□ 1
CACNA1A-243ENST00000637616 PSTPIP1O43586 416 aa21.28■■□□□ 1
CACNA1A-243ENST00000637616 LGR5O75473 907 aa21.28■■□□□ 1
CACNA1A-243ENST00000637616 HAUS5O94927 633 aa21.28■■□□□ 1
CACNA1A-243ENST00000637616 PPP1R15BQ5SWA1 713 aa21.28■■□□□ 1
CACNA1A-243ENST00000637616 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.28■■□□□ 1
CACNA1A-243ENST00000637616 VPS52Q8N1B4 723 aa21.28■■□□□ 1
CACNA1A-243ENST00000637616 OGFOD1Q8N543 542 aa21.28■■□□□ 1
CACNA1A-243ENST00000637616 EXD1Q8NHP7 514 aa21.28■■□□□ 1
CACNA1A-243ENST00000637616 BTBD10Q9BSF8 475 aa21.28■■□□□ 1
CACNA1A-243ENST00000637616 IDI2Q9BXS1 227 aa21.28■■□□□ 1
CACNA1A-243ENST00000637616 WASF2Q9Y6W5 498 aa21.28■■□□□ 1
CACNA1A-243ENST00000637616 SIGLEC16A6NMB1 481 aa21.28■■□□□ 1
CACNA1A-243ENST00000637616 TROVE2P10155 538 aaKnown RBP eCLIP21.28■■□□□ 1
CACNA1A-243ENST00000637616 VHLP40337 213 aa21.28■■□□□ 1
CACNA1A-243ENST00000637616 MDH1BQ5I0G3 518 aa21.28■■□□□ 1
CACNA1A-243ENST00000637616 FNBP1LQ5T0N5 605 aa21.28■■□□□ 1
CACNA1A-243ENST00000637616 TDRPQ86YL5 185 aa21.28■■□□□ 1
CACNA1A-243ENST00000637616 MCUR1Q96AQ8 359 aa21.28■■□□□ 1
CACNA1A-243ENST00000637616 MRPL11Q9Y3B7 192 aaKnown RBP21.28■■□□□ 1
CACNA1A-243ENST00000637616 CLUHO75153 1309 aa21.28■■□□□ 1
CACNA1A-243ENST00000637616 AHCYL1O43865 530 aa21.27■■□□□ 1
CACNA1A-243ENST00000637616 SNUPNO95149 360 aaKnown RBP21.27■■□□□ 1
CACNA1A-243ENST00000637616 NCKAP1LP55160 1127 aa21.27■■□□□ 1
CACNA1A-243ENST00000637616 C3orf62Q6ZUJ4 267 aa21.27■■□□□ 1
CACNA1A-243ENST00000637616 ZNF276Q8N554 614 aa21.27■■□□□ 1
CACNA1A-243ENST00000637616 ALLCQ8N6M5 410 aa21.27■■□□□ 1
CACNA1A-243ENST00000637616 FAM81BQ96LP2 452 aa21.27■■□□□ 1
CACNA1A-243ENST00000637616 GLIS2Q9BZE0 524 aaPredicted RBP21.27■■□□□ 1
CACNA1A-243ENST00000637616 MANSC1Q9H8J5 431 aa21.27■■□□□ 1
CACNA1A-243ENST00000637616 KMT5AQ9NQR1 393 aa21.27■■□□□ 1
CACNA1A-243ENST00000637616 RABGEF1Q9UJ41 708 aa21.27■■□□□ 1
CACNA1A-243ENST00000637616 ASTN2O75129 1339 aaPredicted RBP21.27■■□□□ 1
CACNA1A-243ENST00000637616 HNRNPDLO14979 420 aaKnown RBP21.27■■□□□ 1
CACNA1A-243ENST00000637616 ALOX15BO15296 676 aa21.27■■□□□ 1
CACNA1A-243ENST00000637616 PMM2O15305 246 aa21.27■■□□□ 1
CACNA1A-243ENST00000637616 CCDC22O60826 627 aa21.27■■□□□ 1
CACNA1A-243ENST00000637616 MAPTP10636 758 aaKnown RBP21.27■■□□□ 1
CACNA1A-243ENST00000637616 TNNI1P19237 187 aa21.27■■□□□ 1
CACNA1A-243ENST00000637616 GLRA2P23416 452 aa21.27■■□□□ 1
CACNA1A-243ENST00000637616 NRLP54845 237 aa21.27■■□□□ 1
CACNA1A-243ENST00000637616 GEMIN4P57678 1058 aaKnown RBP21.27■■□□□ 1
CACNA1A-243ENST00000637616 RNASEH2BQ5TBB1 312 aaKnown RBP21.27■■□□□ 1
CACNA1A-243ENST00000637616 LIN9Q5TKA1 542 aa21.27■■□□□ 1
CACNA1A-243ENST00000637616 CENPUQ71F23 418 aa21.27■■□□□ 1
CACNA1A-243ENST00000637616 BICD1Q96G01 975 aa21.27■■□□□ 1
CACNA1A-243ENST00000637616 TTC25Q96NG3 672 aa21.27■■□□□ 1
CACNA1A-243ENST00000637616 SLITRK1Q96PX8 696 aa21.27■■□□□ 1
CACNA1A-243ENST00000637616 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.27■■□□□ 1
CACNA1A-243ENST00000637616 CYP1A1P04798 512 aaPredicted RBP21.27■□□□□ 0.99
CACNA1A-243ENST00000637616 FOXB2Q5VYV0 432 aa21.27■□□□□ 0.99
CACNA1A-243ENST00000637616 CPXCR1Q8N123 301 aa21.27■□□□□ 0.99
CACNA1A-243ENST00000637616 RNF217Q8TC41 542 aa21.27■□□□□ 0.99
CACNA1A-243ENST00000637616 TLE6Q9H808 572 aa21.27■□□□□ 0.99
CACNA1A-243ENST00000637616 EHMT1Q9H9B1 1298 aa21.27■□□□□ 0.99
CACNA1A-243ENST00000637616 PCDHB4Q9Y5E5 795 aa21.27■□□□□ 0.99
CACNA1A-243ENST00000637616 RBBP6Q7Z6E9 1792 aaKnown RBP21.26■□□□□ 0.99
CACNA1A-243ENST00000637616 TCP10L2B9ZVM9 353 aa21.26■□□□□ 0.99
CACNA1A-243ENST00000637616 GDF10P55107 478 aa21.26■□□□□ 0.99
CACNA1A-243ENST00000637616 EAPPQ56P03 285 aaPredicted RBP21.26■□□□□ 0.99
CACNA1A-243ENST00000637616 RHPN2Q8IUC4 686 aa21.26■□□□□ 0.99
CACNA1A-243ENST00000637616 TTC17Q96AE7 1141 aa21.26■□□□□ 0.99
CACNA1A-243ENST00000637616 MFSD14AQ96MC6 490 aa21.26■□□□□ 0.99
CACNA1A-243ENST00000637616 PAFAH2Q99487 392 aa21.26■□□□□ 0.99
CACNA1A-243ENST00000637616 TAS2R1Q9NYW7 299 aa21.26■□□□□ 0.99
CACNA1A-243ENST00000637616 LNPEPQ9UIQ6 1025 aa21.26■□□□□ 0.99
CACNA1A-243ENST00000637616 ACOT2P49753 483 aa21.26■□□□□ 0.99
CACNA1A-243ENST00000637616 ARFIP2P53365 341 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms