RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 C2CD6Q53TS8 623 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 ZNF667Q5HYK9 610 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 WDR78Q5VTH9 848 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 C9orf131Q5VYM1 1079 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 MFSD5Q6N075 450 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 GPAT2Q6NUI2 795 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 DRICH1Q6PGQ1 229 aaPredicted RBP12.84□□□□□ -0.35
CLN8-212ENST00000637083 RHBDF2Q6PJF5 856 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 NIPA2Q8N8Q9 360 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 SERPINB12Q96P63 405 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 CCDC77Q9BR77 488 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 LHX5Q9H2C1 402 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 FAM124BQ9H5Z6 455 aaPredicted RBP12.84□□□□□ -0.35
CLN8-212ENST00000637083 TTLL13PA6NNM8 815 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 MCF2P10911 925 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 FGFR4P22455 802 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 TMOD1P28289 359 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 MMP13P45452 471 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 DPY19L2Q6NUT2 758 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 GSTA5Q7RTV2 222 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 TRIM50Q86XT4 487 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 FBXO16Q8IX29 292 aaPredicted RBP12.83□□□□□ -0.36
CLN8-212ENST00000637083 TTC39CQ8N584 583 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 IPO4Q8TEX9 1081 aaKnown RBP12.83□□□□□ -0.36
CLN8-212ENST00000637083 OPTNQ96CV9 577 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 FGD4Q96M96 766 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 HEMGNQ9BXL5 484 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 CDC42EP4Q9H3Q1 356 aaKnown RBP12.83□□□□□ -0.36
CLN8-212ENST00000637083 RABEP2Q9H5N1 569 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 COL1A2P08123 1366 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 MEFVO15553 781 aaPredicted RBP12.83□□□□□ -0.36
CLN8-212ENST00000637083 KRT1P04264 644 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 BRD2P25440 801 aaKnown RBP12.83□□□□□ -0.36
CLN8-212ENST00000637083 IVDP26440 423 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 RDXP35241 583 aaKnown RBP12.83□□□□□ -0.36
CLN8-212ENST00000637083 ITGA8P53708 1063 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 SEC24CP53992 1094 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 MBTD1Q05BQ5 628 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 LLGL2Q6P1M3 1020 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 POLNQ7Z5Q5 900 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 OTUD6BQ8N6M0 293 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 ATG4AQ8WYN0 398 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 RAPGEF5Q92565 580 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 MCEEQ96PE7 176 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 FRMD8P1Q9BZ68 369 aaPredicted RBP12.83□□□□□ -0.36
CLN8-212ENST00000637083 ASB7Q9H672 318 aa12.83□□□□□ -0.36
CLN8-212ENST00000637083 DRG1Q9Y295 367 aaKnown RBP12.83□□□□□ -0.36
CLN8-212ENST00000637083 TTC4O95801 387 aa12.82□□□□□ -0.36
CLN8-212ENST00000637083 GH1P01241 217 aa12.82□□□□□ -0.36
CLN8-212ENST00000637083 KRT19P08727 400 aa12.82□□□□□ -0.36
CLN8-212ENST00000637083 YBX3P16989 372 aaKnown RBP eCLIP12.82□□□□□ -0.36
CLN8-212ENST00000637083 GJC1P36383 396 aa12.82□□□□□ -0.36
CLN8-212ENST00000637083 ASPAP45381 313 aa12.82□□□□□ -0.36
CLN8-212ENST00000637083 SNAPC2Q13487 334 aa12.82□□□□□ -0.36
CLN8-212ENST00000637083 HADHQ16836 314 aaKnown RBP12.82□□□□□ -0.36
CLN8-212ENST00000637083 ERMARDQ5T6L9 678 aa12.82□□□□□ -0.36
CLN8-212ENST00000637083 IFNLR1Q8IU57 520 aaPredicted RBP12.82□□□□□ -0.36
CLN8-212ENST00000637083 RELL1Q8IUW5 271 aa12.82□□□□□ -0.36
CLN8-212ENST00000637083 SLITRK1Q96PX8 696 aa12.82□□□□□ -0.36
CLN8-212ENST00000637083 XPO6Q96QU8 1125 aaKnown RBP12.82□□□□□ -0.36
CLN8-212ENST00000637083 SELENOSQ9BQE4 189 aa12.82□□□□□ -0.36
CLN8-212ENST00000637083 XYLT2Q9H1B5 865 aa12.82□□□□□ -0.36
CLN8-212ENST00000637083 CDT1Q9H211 546 aa12.82□□□□□ -0.36
CLN8-212ENST00000637083 CYP3A43Q9HB55 503 aa12.82□□□□□ -0.36
CLN8-212ENST00000637083 VTA1Q9NP79 307 aa12.82□□□□□ -0.36
CLN8-212ENST00000637083 EFR3BQ9Y2G0 817 aa12.82□□□□□ -0.36
CLN8-212ENST00000637083 TCRBV5S1A1TA0A578 114 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 TCEA3O75764 348 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 KRT7P08729 469 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 WEE2P0C1S8 567 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 CD19P15391 556 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 SSTR3P32745 418 aaPredicted RBP12.81□□□□□ -0.36
CLN8-212ENST00000637083 GSCP56915 257 aaPredicted RBP12.81□□□□□ -0.36
CLN8-212ENST00000637083 RPL7AP62424 266 aaKnown RBP12.81□□□□□ -0.36
CLN8-212ENST00000637083 IRX5P78411 483 aaPredicted RBP12.81□□□□□ -0.36
CLN8-212ENST00000637083 LLGL1Q15334 1064 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 ZNF394Q53GI3 561 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 TNFAIP8L3Q5GJ75 292 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 PPP1R15BQ5SWA1 713 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 GKAP1Q5VSY0 366 aaPredicted RBP12.81□□□□□ -0.36
CLN8-212ENST00000637083 SPOCD1Q6ZMY3 1216 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 CPLX4Q7Z7G2 160 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 TADA2BQ86TJ2 420 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 NT5DC4Q86YG4 428 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 TTC13Q8NBP0 860 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 FNIP1Q8TF40 1166 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 CHMP6Q96FZ7 201 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 SYT17Q9BSW7 474 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 BCO2Q9BYV7 579 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 MIS12Q9H081 205 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 NEU2Q9Y3R4 380 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 C5orf60A6NFR6 353 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 UNCXA6NJT0 531 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 SIGLEC16A6NMB1 481 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 C22orf31O95567 290 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 AUHQ13825 339 aaKnown RBP12.81□□□□□ -0.36
CLN8-212ENST00000637083 ACAP1Q15027 740 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 EAPPQ56P03 285 aaPredicted RBP12.81□□□□□ -0.36
CLN8-212ENST00000637083 TFDP3Q5H9I0 405 aa12.81□□□□□ -0.36
CLN8-212ENST00000637083 IZUMO3Q5VZ72 239 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms