RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 PER1O15534 1290 aaPredicted RBP9.28□□□□□ -0.92
CHRNA7-219ENST00000636709 HBP1O60381 514 aa9.28□□□□□ -0.92
CHRNA7-219ENST00000636709 SKIP12755 728 aa9.28□□□□□ -0.92
CHRNA7-219ENST00000636709 PLEKHF1Q96S99 279 aa9.28□□□□□ -0.92
CHRNA7-219ENST00000636709 TMEM117Q9H0C3 514 aa9.28□□□□□ -0.92
CHRNA7-219ENST00000636709 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.28□□□□□ -0.92
CHRNA7-219ENST00000636709 TUBE1Q9UJT0 475 aa9.28□□□□□ -0.92
CHRNA7-219ENST00000636709 HECW2Q9P2P5 1572 aa9.28□□□□□ -0.92
CHRNA7-219ENST00000636709 ATP1A3P13637 1013 aa9.28□□□□□ -0.92
CHRNA7-219ENST00000636709 ITGB6P18564 788 aa9.28□□□□□ -0.92
CHRNA7-219ENST00000636709 TCN1P20061 433 aaPredicted RBP9.28□□□□□ -0.92
CHRNA7-219ENST00000636709 AP3M2P53677 418 aa9.28□□□□□ -0.92
CHRNA7-219ENST00000636709 AMPD2Q01433 879 aa9.28□□□□□ -0.92
CHRNA7-219ENST00000636709 EPHA7Q15375 998 aa9.28□□□□□ -0.92
CHRNA7-219ENST00000636709 SNRNP35Q16560 246 aaKnown RBP9.28□□□□□ -0.92
CHRNA7-219ENST00000636709 TKFCQ3LXA3 575 aa9.28□□□□□ -0.92
CHRNA7-219ENST00000636709 CCDC137Q6PK04 289 aaKnown RBP9.28□□□□□ -0.92
CHRNA7-219ENST00000636709 PALB2Q86YC2 1186 aa9.28□□□□□ -0.92
CHRNA7-219ENST00000636709 EMILIN2Q9BXX0 1053 aa9.28□□□□□ -0.92
CHRNA7-219ENST00000636709 SHCBP1LQ9BZQ2 653 aa9.28□□□□□ -0.92
CHRNA7-219ENST00000636709 RASSF9O75901 435 aa9.27□□□□□ -0.92
CHRNA7-219ENST00000636709 ALDH2P05091 517 aa9.27□□□□□ -0.92
CHRNA7-219ENST00000636709 MARSP56192 900 aaKnown RBP9.27□□□□□ -0.92
CHRNA7-219ENST00000636709 RPS7P62081 194 aaKnown RBP9.27□□□□□ -0.92
CHRNA7-219ENST00000636709 ZBTB17Q13105 803 aa9.27□□□□□ -0.92
CHRNA7-219ENST00000636709 DHX40Q8IX18 779 aaKnown RBP9.27□□□□□ -0.92
CHRNA7-219ENST00000636709 INPP5DQ92835 1189 aa9.27□□□□□ -0.92
CHRNA7-219ENST00000636709 SNF8Q96H20 258 aa9.27□□□□□ -0.92
CHRNA7-219ENST00000636709 MOV10L1Q9BXT6 1211 aaKnown RBP9.27□□□□□ -0.92
CHRNA7-219ENST00000636709 GLIS2Q9BZE0 524 aaPredicted RBP9.27□□□□□ -0.92
CHRNA7-219ENST00000636709 TUFT1Q9NNX1 390 aa9.27□□□□□ -0.92
CHRNA7-219ENST00000636709 KDM6AO15550 1401 aaPredicted RBP9.27□□□□□ -0.92
CHRNA7-219ENST00000636709 ARHGEF12Q9NZN5 1544 aa9.27□□□□□ -0.92
CHRNA7-219ENST00000636709 CBX4O00257 560 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 CYB561D2O14569 222 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 DGAT1O75907 488 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 LUC7L3O95232 432 aaKnown RBP9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 NFICP08651 508 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 SLC8A1P32418 973 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 PTGISQ16647 500 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 NFRKBQ6P4R8 1299 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 CLYBLQ8N0X4 340 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 ZC3H15Q8WU90 426 aaKnown RBP9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 TIMM13Q9Y5L4 95 aaPredicted RBP9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 SNX8Q9Y5X2 465 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 ATMINO43313 823 aaPredicted RBP9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 CTSEP14091 401 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 NR1D1P20393 614 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 ACO1P21399 889 aaKnown RBP9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 TAF6P49848 677 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 SGSM1Q2NKQ1 1148 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 PGS1Q32NB8 556 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 FUT11Q495W5 492 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 PPM1LQ5SGD2 360 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 TEX9Q8N6V9 391 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 CRAMP1Q96RY5 1269 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 PRR36Q9H6K5 1346 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 M0QYT0 321 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 PTPN7P35236 360 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 ALDH9A1P49189 494 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 CLCN3P51790 818 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 NCKAP1LP55160 1127 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 EPC2Q52LR7 807 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 TUBB6Q9BUF5 446 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 DBR1Q9UK59 544 aaKnown RBP9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 NCKAP1Q9Y2A7 1128 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 SPATA31A6Q5VVP1 1343 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 IL18RAPO95256 599 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 ACOX1Q15067 660 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 STYK1Q6J9G0 422 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 C16orf62Q7Z3J2 963 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 CLIP3Q96DZ5 547 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 PDGFDQ9GZP0 370 aaPredicted RBP9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 ADM5C9JUS6 153 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 PMS2P54278 862 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 TAP1Q03518 808 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 CES5AQ6NT32 575 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 TRIM72Q6ZMU5 477 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 RBBP8NLQ8NC74 664 aaPredicted RBP9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 KCNV2Q8TDN2 545 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 SKA1Q96BD8 255 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 DDIT4Q9NX09 232 aa9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 MARCOQ9UEW3 520 aaPredicted RBP9.27□□□□□ -0.93
CHRNA7-219ENST00000636709 SHROOM2Q13796 1616 aa9.26□□□□□ -0.93
CHRNA7-219ENST00000636709 DGKIO75912 1065 aa9.26□□□□□ -0.93
CHRNA7-219ENST00000636709 GTF2H1P32780 548 aa9.26□□□□□ -0.93
CHRNA7-219ENST00000636709 GRK3P35626 688 aa9.26□□□□□ -0.93
CHRNA7-219ENST00000636709 USP11P51784 963 aa9.26□□□□□ -0.93
CHRNA7-219ENST00000636709 APBA1Q02410 837 aa9.26□□□□□ -0.93
CHRNA7-219ENST00000636709 CLEC16AQ2KHT3 1053 aa9.26□□□□□ -0.93
CHRNA7-219ENST00000636709 GALNTL6Q49A17 601 aa9.26□□□□□ -0.93
CHRNA7-219ENST00000636709 KIAA1324Q6UXG2 1013 aaKnown RBP9.26□□□□□ -0.93
CHRNA7-219ENST00000636709 SOHLH2Q9NX45 425 aa9.26□□□□□ -0.93
CHRNA7-219ENST00000636709 PRR23D1E9PI22 279 aaPredicted RBP9.26□□□□□ -0.93
CHRNA7-219ENST00000636709 FYNP06241 537 aa9.26□□□□□ -0.93
CHRNA7-219ENST00000636709 PRR23D2P0DMB1 279 aaPredicted RBP9.26□□□□□ -0.93
CHRNA7-219ENST00000636709 YWHAZP63104 245 aaKnown RBP9.26□□□□□ -0.93
CHRNA7-219ENST00000636709 ZNF284Q2VY69 593 aa9.26□□□□□ -0.93
CHRNA7-219ENST00000636709 TRMT11Q7Z4G4 463 aaKnown RBP9.26□□□□□ -0.93
CHRNA7-219ENST00000636709 SERAC1Q96JX3 654 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms