RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 KPNB1Q14974 876 aaKnown RBP15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 KLHL38Q2WGJ6 581 aa15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 PLEKHG4Q58EX7 1191 aa15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 CCDC62Q6P9F0 684 aa15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 PTF1AQ7RTS3 328 aa15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 FHDC1Q9C0D6 1143 aaPredicted RBP15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 PDP2Q9P2J9 529 aa15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 HEY2Q9UBP5 337 aa15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 DCTN4Q9UJW0 460 aa15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 DNPEPQ9ULA0 475 aa15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 LTBP1Q14766 1721 aa15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 CFAP69A5D8W1 941 aa15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 PPEF1O14829 653 aaPredicted RBP15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 MAP3K7O43318 606 aa15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 ATP9AO75110 1047 aa15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 RTN3O95197 1032 aaPredicted RBP15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 FGFR1P11362 822 aa15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 SSR1P43307 286 aaKnown RBP15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 QARSP47897 775 aaKnown RBP15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 ARFIP2P53365 341 aa15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 ZBTB16Q05516 673 aa15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 PDIA2Q13087 525 aaKnown RBP15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 FASTKD3Q14CZ7 662 aaKnown RBP15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 ACSBG2Q5FVE4 666 aa15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 RNASEH2BQ5TBB1 312 aaKnown RBP15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 MAP4K3Q8IVH8 894 aa15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 FBXL18Q96ME1 805 aa15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 TBX20Q9UMR3 447 aa15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 SIPA1L1O43166 1804 aa15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 ZNFX1Q9P2E3 1918 aaKnown RBP15.61■□□□□ 0.09
CACNA1A-220ENST00000635988 AP1G2O75843 785 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 ADRA1DP25100 572 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 CDK16Q00536 496 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 PDCD2Q16342 344 aaPredicted RBP15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 TMEM132AQ24JP5 1023 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 PLEKHA7Q6IQ23 1121 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 ADGRD1Q6QNK2 874 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 SESTD1Q86VW0 696 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 ATP11CQ8NB49 1132 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 TRIM4Q9C037 500 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 PCDH9Q9HC56 1237 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 ARL8BQ9NVJ2 186 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 KANSL3Q9P2N6 904 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 FAM198AQ9UFP1 575 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 IP6K2Q9UHH9 426 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 A0A0G2JND7 137 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 G3V3G9 751 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 DDX39AO00148 427 aaKnown RBP15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 CYP24A1Q07973 514 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 MAMLD1Q13495 774 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 HIF1AQ16665 826 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 FAM98CQ17RN3 349 aaKnown RBP15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 DCAF8Q5TAQ9 597 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 FAM91A1Q658Y4 838 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 SH3BP5LQ7L8J4 393 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 RFWD2Q8NHY2 731 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 UCMAQ8WVF2 138 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 BICD1Q96G01 975 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 NR1H4Q96RI1 486 aaPredicted RBP15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 CCDC28BQ9BUN5 200 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 TSSK1BQ9BXA7 367 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 LRRC37AA6NMS7 1700 aa15.6■□□□□ 0.09
CACNA1A-220ENST00000635988 KRT36O76013 467 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 GH2P01242 217 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 ESRRAP11474 423 aaPredicted RBP15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 KCNA3P22001 575 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 GJC1P36383 396 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 DAB2IPQ5VWQ8 1189 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 NIPA1Q7RTP0 329 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 PHLDB2Q86SQ0 1253 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 ZC3H18Q86VM9 953 aaKnown RBP15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 SCYL3Q8IZE3 742 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 ZNF276Q8N554 614 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 NKD2Q969F2 451 aaPredicted RBP15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 SKA1Q96BD8 255 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 FGD4Q96M96 766 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 TOPORSQ9NS56 1045 aaPredicted RBP15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 RABGEF1Q9UJ41 708 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 USTQ9Y2C2 406 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 TLR3O15455 904 aaKnown RBP15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 IL1BP01584 269 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 ITGAVP06756 1048 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 YWHABP31946 246 aaKnown RBP15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 CACNB3P54284 484 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 VCPP55072 806 aaKnown RBP15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 WDR44Q5JSH3 913 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 LRRC38Q5VT99 294 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 RNF220Q5VTB9 566 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 CAPN12Q6ZSI9 719 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 CHSY1Q86X52 802 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 PHF13Q86YI8 300 aaPredicted RBP15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 ARHGAP18Q8N392 663 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 BANPQ8N9N5 519 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 GLIS1Q8NBF1 620 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 TCP10LQ8TDR4 215 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 PYROXD1Q8WU10 500 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 CHURC1Q8WUH1 139 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 NRG4Q8WWG1 115 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 GATA6Q92908 595 aa15.59■□□□□ 0.09
CACNA1A-220ENST00000635988 SLITRK1Q96PX8 696 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms