RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 DDX21Q9NR30 783 aaKnown RBP eCLIP3.37□□□□□ -1.87
PSPC1-208ENST00000635562 BLOC1S4Q9NUP1 217 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 TMEM51Q9NW97 253 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 COMMD8Q9NX08 183 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 ING3Q9NXR8 418 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 STAP2Q9UGK3 403 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 SAP30BPQ9UHR5 308 aaKnown RBP3.37□□□□□ -1.87
PSPC1-208ENST00000635562 PA2G4Q9UQ80 394 aaKnown RBP3.37□□□□□ -1.87
PSPC1-208ENST00000635562 TMX2Q9Y320 296 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 PCDHB1Q9Y5F3 818 aa3.37□□□□□ -1.87
PSPC1-208ENST00000635562 CFAP20Q9Y6A4 193 aaKnown RBP3.37□□□□□ -1.87
PSPC1-208ENST00000635562 WNT10BO00744 389 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 DAPK3O43293 454 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 HTATSF1O43719 755 aaKnown RBP3.36□□□□□ -1.87
PSPC1-208ENST00000635562 KIF1CO43896 1103 aaKnown RBP3.36□□□□□ -1.87
PSPC1-208ENST00000635562 AKR1B10O60218 316 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 KIF5CO60282 957 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 TPPPO94811 219 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 UBXN7O94888 489 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 ENDOD1O94919 500 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 INMTO95050 263 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 HRGP04196 525 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 VSIG10L2P0DP72 767 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 HIBADHP31937 336 aaKnown RBP3.36□□□□□ -1.87
PSPC1-208ENST00000635562 GUCY1A2P33402 732 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 CRHR1P34998 444 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 USP14P54578 494 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 RRADP55042 308 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 NAP1L1P55209 391 aaKnown RBP3.36□□□□□ -1.87
PSPC1-208ENST00000635562 ATP8B2P98198 1209 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 DUSP8Q13202 625 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 TMED1Q13445 227 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 TRIM29Q14134 588 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 NOMO1Q15155 1222 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 PKN2Q16513 984 aaKnown RBP3.36□□□□□ -1.87
PSPC1-208ENST00000635562 TTC31Q49AM3 519 aaPredicted RBP3.36□□□□□ -1.87
PSPC1-208ENST00000635562 INTS11Q5TA45 600 aaKnown RBP3.36□□□□□ -1.87
PSPC1-208ENST00000635562 SPATA1Q5VX52 437 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 LDHAL6AQ6ZMR3 332 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 RTL10Q7L3V2 364 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 MRGPRGQ86SM5 289 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 ERC1Q8IUD2 1116 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 KIAA0319LQ8IZA0 1049 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 LSMEM1Q8N8F7 131 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 OR7D4Q8NG98 312 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 IL17DQ8TAD2 202 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 NUP133Q8WUM0 1156 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 ZNF480Q8WV37 535 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 IPCEF1Q8WWN9 437 aaPredicted RBP3.36□□□□□ -1.87
PSPC1-208ENST00000635562 KAT5Q92993 513 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 LRGUKQ96M69 825 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 FAM193BQ96PV7 902 aaPredicted RBP3.36□□□□□ -1.87
PSPC1-208ENST00000635562 DPYSL5Q9BPU6 564 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 PAIP2Q9BPZ3 127 aaKnown RBP3.36□□□□□ -1.87
PSPC1-208ENST00000635562 LRFN3Q9BTN0 628 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 TMEM60Q9H2L4 133 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 YY1AP1Q9H869 796 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 PRKRIP1Q9H875 184 aaPredicted RBP3.36□□□□□ -1.87
PSPC1-208ENST00000635562 DBNDD1Q9H9R9 158 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 TLR9Q9NR96 1032 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 TBC1D22BQ9NU19 505 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 PDRG1Q9NUG6 133 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 RBM28Q9NW13 759 aaKnown RBP3.36□□□□□ -1.87
PSPC1-208ENST00000635562 PARPBPQ9NWS1 579 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 HOXC10Q9NYD6 342 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 GPRC5DQ9NZD1 345 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.36□□□□□ -1.87
PSPC1-208ENST00000635562 SUN2Q9UH99 717 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 TBK1Q9UHD2 729 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 TPCN1Q9ULQ1 816 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 AFG3L2Q9Y4W6 797 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 PCDHGB3Q9Y5G1 929 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 MAGED1Q9Y5V3 778 aaPredicted RBP3.36□□□□□ -1.87
PSPC1-208ENST00000635562 ATRNL1Q5VV63 1379 aa3.36□□□□□ -1.87
PSPC1-208ENST00000635562 SLC16A6O15403 523 aa3.35□□□□□ -1.87
PSPC1-208ENST00000635562 B3GALT2O43825 422 aa3.35□□□□□ -1.87
PSPC1-208ENST00000635562 CTNND1O60716 968 aaKnown RBP3.35□□□□□ -1.87
PSPC1-208ENST00000635562 PRAMEF4O60810 478 aa3.35□□□□□ -1.87
PSPC1-208ENST00000635562 DTNBO60941 627 aa3.35□□□□□ -1.87
PSPC1-208ENST00000635562 TOX4O94842 621 aa3.35□□□□□ -1.87
PSPC1-208ENST00000635562 BAG2O95816 211 aa3.35□□□□□ -1.87
PSPC1-208ENST00000635562 GASTP01350 101 aa3.35□□□□□ -1.87
PSPC1-208ENST00000635562 AMY1AP04745 511 aa3.35□□□□□ -1.87
PSPC1-208ENST00000635562 ALDH2P05091 517 aa3.35□□□□□ -1.87
PSPC1-208ENST00000635562 JUNP05412 331 aaKnown RBP3.35□□□□□ -1.87
PSPC1-208ENST00000635562 C1SP09871 688 aa3.35□□□□□ -1.87
PSPC1-208ENST00000635562 HSD3B1P14060 373 aa3.35□□□□□ -1.87
PSPC1-208ENST00000635562 RPS6KB1P23443 525 aa3.35□□□□□ -1.87
PSPC1-208ENST00000635562 ADSLP30566 484 aaPredicted RBP3.35□□□□□ -1.87
PSPC1-208ENST00000635562 GALNSP34059 522 aa3.35□□□□□ -1.87
PSPC1-208ENST00000635562 HOXD12P35452 270 aa3.35□□□□□ -1.87
PSPC1-208ENST00000635562 MAP2K6P52564 334 aa3.35□□□□□ -1.87
PSPC1-208ENST00000635562 AGFG1P52594 562 aaKnown RBP3.35□□□□□ -1.87
PSPC1-208ENST00000635562 NANOS3P60323 173 aaKnown RBP3.35□□□□□ -1.87
PSPC1-208ENST00000635562 ATP2C1P98194 919 aaPredicted RBP3.35□□□□□ -1.87
PSPC1-208ENST00000635562 CDC42EP1Q00587 391 aa3.35□□□□□ -1.87
PSPC1-208ENST00000635562 SATB1Q01826 763 aa3.35□□□□□ -1.87
PSPC1-208ENST00000635562 TARDBPQ13148 414 aaKnown RBP eCLIP3.35□□□□□ -1.875e-7■■■■■ 35.8
PSPC1-208ENST00000635562 PPP2R5BQ15173 497 aa3.35□□□□□ -1.87
PSPC1-208ENST00000635562 ARHGAP29Q52LW3 1261 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms