RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 TAC1P20366 129 aa11.31□□□□□ -0.6
PSPC1-207ENST00000635251 BACE1P56817 501 aa11.31□□□□□ -0.6
PSPC1-207ENST00000635251 ZNF268Q14587 947 aaPredicted RBP11.31□□□□□ -0.6
PSPC1-207ENST00000635251 ZNF394Q53GI3 561 aa11.31□□□□□ -0.6
PSPC1-207ENST00000635251 CGB2Q6NT52 195 aa11.31□□□□□ -0.6
PSPC1-207ENST00000635251 SPOCD1Q6ZMY3 1216 aa11.31□□□□□ -0.6
PSPC1-207ENST00000635251 ZBED8Q8IZ13 594 aa11.31□□□□□ -0.6
PSPC1-207ENST00000635251 ALLCQ8N6M5 410 aa11.31□□□□□ -0.6
PSPC1-207ENST00000635251 MAML1Q92585 1016 aa11.31□□□□□ -0.6
PSPC1-207ENST00000635251 N4BP2L2Q92802 583 aaPredicted RBP11.31□□□□□ -0.6
PSPC1-207ENST00000635251 ACSF2Q96CM8 615 aaPredicted RBP11.31□□□□□ -0.6
PSPC1-207ENST00000635251 THOC1Q96FV9 657 aaKnown RBP11.31□□□□□ -0.6
PSPC1-207ENST00000635251 SMC6Q96SB8 1091 aa11.31□□□□□ -0.6
PSPC1-207ENST00000635251 PORCNQ9H237 461 aa11.31□□□□□ -0.6
PSPC1-207ENST00000635251 TRABDQ9H4I3 376 aa11.31□□□□□ -0.6
PSPC1-207ENST00000635251 AS3MTQ9HBK9 375 aa11.31□□□□□ -0.6
PSPC1-207ENST00000635251 LRRD1A4D1F6 860 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 SPATA31C2B4DYI2 1134 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 F8VP50 259 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 EGFRP00533 1210 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 MMP8P22894 467 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 FOXN2P32314 431 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 GBP2P32456 591 aaPredicted RBP11.3□□□□□ -0.6
PSPC1-207ENST00000635251 ELF1P32519 619 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 HMGCS2P54868 508 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 MCL1Q07820 350 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 SPARCL1Q14515 664 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 RNF43Q68DV7 783 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 CENPUQ71F23 418 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 TRABD2AQ86V40 505 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 C4orf33Q8N1A6 199 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 FBF1Q8TES7 1133 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 TCHPQ9BT92 498 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 VPS33BQ9H267 617 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 ACAD9Q9H845 621 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 UBN1Q9NPG3 1134 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 EURLQ9NYK6 297 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 CYP39A1Q9NYL5 469 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 CNTN6Q9UQ52 1028 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 A0A0B4J269 797 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 LOC102724159A0A0B4J2E5 919 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 A0A1B0GUA9 196 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 STAM2O75886 525 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 PIGRP01833 764 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 WDR4P57081 412 aaKnown RBP11.3□□□□□ -0.6
PSPC1-207ENST00000635251 PDIA2Q13087 525 aaKnown RBP11.3□□□□□ -0.6
PSPC1-207ENST00000635251 DNAJC3Q13217 504 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 FASTKD3Q14CZ7 662 aaKnown RBP11.3□□□□□ -0.6
PSPC1-207ENST00000635251 SETDB1Q15047 1291 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 PWP2Q15269 919 aaKnown RBP11.3□□□□□ -0.6
PSPC1-207ENST00000635251 PKN2Q16513 984 aaKnown RBP11.3□□□□□ -0.6
PSPC1-207ENST00000635251 TMEM63BQ5T3F8 832 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 DRICH1Q6PGQ1 229 aaPredicted RBP11.3□□□□□ -0.6
PSPC1-207ENST00000635251 ZBTB33Q86T24 672 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 ECHDC2Q86YB7 292 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 TMEM35BQ8NCS4 154 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 JDP2Q8WYK2 163 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 TMEM121Q9BTD3 319 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 PICK1Q9NRD5 415 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 PHTF1Q9UMS5 762 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 TRIM33Q9UPN9 1127 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 AGTPBP1Q9UPW5 1226 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 CNTNAP2Q9UHC6 1331 aa11.3□□□□□ -0.6
PSPC1-207ENST00000635251 GOLGA8SH3BPF8 625 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 GOLGA8MH3BSY2 632 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 KRT16P08779 473 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 RPSAP08865 295 aaKnown RBP11.29□□□□□ -0.6
PSPC1-207ENST00000635251 CHRM1P11229 460 aaPredicted RBP11.29□□□□□ -0.6
PSPC1-207ENST00000635251 ATP4AP20648 1035 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 CA4P22748 312 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 GCAP28676 217 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 OAZ1P54368 228 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 VCPP55072 806 aaKnown RBP11.29□□□□□ -0.6
PSPC1-207ENST00000635251 SP2Q02086 613 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 MGAT5Q09328 741 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 ACVR2BQ13705 512 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 TMEM132BQ14DG7 1078 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 MORF4L2Q15014 288 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 TFDP3Q5H9I0 405 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 NBPF12Q5TAG4 269 aaPredicted RBP11.29□□□□□ -0.6
PSPC1-207ENST00000635251 ZNF280CQ8ND82 737 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 REPS2Q8NFH8 660 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 AGAP11Q8TF27 550 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 PRCCQ92733 491 aaPredicted RBP11.29□□□□□ -0.6
PSPC1-207ENST00000635251 STAMBPL1Q96FJ0 436 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 DHX33Q9H6R0 707 aaKnown RBP11.29□□□□□ -0.6
PSPC1-207ENST00000635251 KIF9Q9HAQ2 790 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 DDX56Q9NY93 547 aaKnown RBP11.29□□□□□ -0.6
PSPC1-207ENST00000635251 ZNF214Q9UL59 606 aaPredicted RBP11.29□□□□□ -0.6
PSPC1-207ENST00000635251 DRG1Q9Y295 367 aaKnown RBP11.29□□□□□ -0.6
PSPC1-207ENST00000635251 L3MBTL1Q9Y468 752 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 hCG_1818297A0A087WSY0 165 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 NDC80O14777 642 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 ASMTLO95671 621 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 CST3P01034 146 aaPredicted RBP11.29□□□□□ -0.6
PSPC1-207ENST00000635251 ARL2P36404 184 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 TNFSF9P41273 254 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 MSH2P43246 934 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 TGFB2P61812 414 aa11.29□□□□□ -0.6
PSPC1-207ENST00000635251 DYNLT1P63172 113 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms