RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 GYS1P13807 737 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 EP400NLQ6ZTU2 488 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 HEATR4Q86WZ0 1026 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 PCYOX1LQ8NBM8 494 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 OMA1Q96E52 524 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 DIABLOQ9NR28 239 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 MRGBPQ9NV56 204 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 SCN3BQ9NY72 215 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 CHORDC1Q9UHD1 332 aaPredicted RBP12.2□□□□□ -0.46
COL11A1-211ENST00000635193 ITGB1BP2Q9UKP3 347 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 GLI1P08151 1106 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 KRT16P08779 473 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 RALAP11233 206 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 PTPN4P29074 926 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 KCNMA1Q12791 1236 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 WASHC2DQ5SRD0 308 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 TLK2Q86UE8 772 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 ARID3BQ8IVW6 561 aaPredicted RBP12.2□□□□□ -0.46
COL11A1-211ENST00000635193 RFWD2Q8NHY2 731 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 PARD3BQ8TEW8 1205 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 SARS2Q9NP81 518 aaKnown RBP12.2□□□□□ -0.46
COL11A1-211ENST00000635193 NARFQ9UHQ1 456 aa12.2□□□□□ -0.46
COL11A1-211ENST00000635193 RARGP13631 454 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 RBBP7Q16576 425 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 PPIL6Q8IXY8 311 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 CNDP1Q96KN2 507 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 TRAPPC9Q96Q05 1148 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 PACSIN1Q9BY11 444 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 UBAP1Q9NZ09 502 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 PAK5Q9P286 719 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 GRID1Q9ULK0 1009 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 PCDHB2Q9Y5E7 798 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 E5RI56 91 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 LZTS3O60299 673 aaPredicted RBP12.19□□□□□ -0.46
COL11A1-211ENST00000635193 KCNA2P16389 499 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 MTM1Q13496 603 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 PRUNE1Q86TP1 453 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 FUKQ8N0W3 1084 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 A8MXQ7 604 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 P4HA2O15460 535 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 RASSF9O75901 435 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 ALBP02768 609 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 CALB2P22676 271 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 TOB1P50616 345 aaPredicted RBP12.19□□□□□ -0.46
COL11A1-211ENST00000635193 TJAP1Q5JTD0 557 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 IRGCQ6NXR0 463 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 TTI2Q6NXR4 508 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 IFNEQ86WN2 208 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 FAM192AQ9GZU8 254 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 CDYLQ9Y232 598 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 F8W8V4 182 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 UBE2Q2LH0YL09 131 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 ZSCAN9O15535 394 aaPredicted RBP12.19□□□□□ -0.46
COL11A1-211ENST00000635193 PDGFRAP16234 1089 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 ADARP55265 1226 aaKnown RBP12.19□□□□□ -0.46
COL11A1-211ENST00000635193 DPY19L2Q6NUT2 758 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 NDUFAF2Q8N183 169 aa12.19□□□□□ -0.46
COL11A1-211ENST00000635193 FKBP6O75344 327 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 MYL2P10916 166 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 ACOT2P49753 483 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 IYDQ6PHW0 289 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 PATL1Q86TB9 770 aaKnown RBP12.18□□□□□ -0.46
COL11A1-211ENST00000635193 LUZP2Q86TE4 346 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 NR1H4Q96RI1 486 aaPredicted RBP12.18□□□□□ -0.46
COL11A1-211ENST00000635193 BBS2Q9BXC9 721 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 TASP1Q9H6P5 420 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 EXOSC4Q9NPD3 245 aaKnown RBP12.18□□□□□ -0.46
COL11A1-211ENST00000635193 ZMYND8Q9ULU4 1186 aaPredicted RBP12.18□□□□□ -0.46
COL11A1-211ENST00000635193 ADGRA3Q8IWK6 1321 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 DGKIO75912 1065 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 CSF1RP07333 972 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 PON1P27169 355 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 PPIDQ08752 370 aaKnown RBP12.18□□□□□ -0.46
COL11A1-211ENST00000635193 ATP1A4Q13733 1029 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 INAQ16352 499 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 WDR72Q3MJ13 1102 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 MEI1Q5TIA1 1274 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 SNX30Q5VWJ9 437 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 SPATA18Q8TC71 538 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 ZNF668Q96K58 619 aaPredicted RBP12.18□□□□□ -0.46
COL11A1-211ENST00000635193 AGAP3Q96P47 875 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 SH2D3AQ9BRG2 576 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 CDY2AQ9Y6F7 541 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 CDY1Q9Y6F8 540 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 UBA6A0AVT1 1052 aaPredicted RBP12.18□□□□□ -0.46
COL11A1-211ENST00000635193 CST8O60676 142 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 LCP1P13796 627 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 HMOX2P30519 316 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 TBL3Q12788 808 aaKnown RBP12.18□□□□□ -0.46
COL11A1-211ENST00000635193 LBRQ14739 615 aaKnown RBP12.18□□□□□ -0.46
COL11A1-211ENST00000635193 C16orf72Q14CZ0 275 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 PPP2R3CQ969Q6 453 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 FAM111AQ96PZ2 611 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 TMEM8AQ9HCN3 771 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 GTF3C4Q9UKN8 822 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 AHCYL1O43865 530 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 RFC5P40937 340 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 USP10Q14694 798 aaKnown RBP12.18□□□□□ -0.46
COL11A1-211ENST00000635193 LPCAT2Q7L5N7 544 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 LDHDQ86WU2 507 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms