RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 VIMP08670 466 aaKnown RBP8.54□□□□□ -1.04
GPC3-204ENST00000631057 ABHD2P08910 425 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 CD58P19256 250 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 UBA1P22314 1058 aaKnown RBP8.54□□□□□ -1.04
GPC3-204ENST00000631057 PTPN7P35236 360 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 GJC1P36383 396 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 YWHAEP62258 255 aaKnown RBP8.54□□□□□ -1.04
GPC3-204ENST00000631057 NFX1Q12986 1120 aaKnown RBP8.54□□□□□ -1.04
GPC3-204ENST00000631057 CAPSQ13938 189 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 NEDD9Q14511 834 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 STAT4Q14765 748 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 TRIP13Q15645 432 aaPredicted RBP8.54□□□□□ -1.04
GPC3-204ENST00000631057 KYNUQ16719 465 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 C2CD6Q53TS8 623 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 ZBTB41Q5SVQ8 909 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 ANGEL2Q5VTE6 544 aaKnown RBP8.54□□□□□ -1.04
GPC3-204ENST00000631057 IER5Q5VY09 327 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 LLGL2Q6P1M3 1020 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 DNAJC24Q6P3W2 148 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 DRICH1Q6PGQ1 229 aaPredicted RBP8.54□□□□□ -1.04
GPC3-204ENST00000631057 GSTA5Q7RTV2 222 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 EXOC3L1Q86VI1 746 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 EXOC8Q8IYI6 725 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 RIBC1Q8N443 379 aaPredicted RBP8.54□□□□□ -1.04
GPC3-204ENST00000631057 ZCCHC9Q8N567 271 aaKnown RBP8.54□□□□□ -1.04
GPC3-204ENST00000631057 TMEM35BQ8NCS4 154 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 OR5B17Q8NGF7 314 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 ZNF526Q8TF50 670 aaPredicted RBP8.54□□□□□ -1.04
GPC3-204ENST00000631057 TCP11Q8WWU5 503 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 ZNF606Q8WXB4 792 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 PRMT1Q99873 361 aaKnown RBP8.54□□□□□ -1.04
GPC3-204ENST00000631057 ZNF518BQ9C0D4 1074 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 DDX56Q9NY93 547 aaKnown RBP8.54□□□□□ -1.04
GPC3-204ENST00000631057 AFG3L2Q9Y4W6 797 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 CEP83Q9Y592 693 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 ZSWIM8A7E2V4 1837 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 OTOFQ9HC10 1997 aa8.54□□□□□ -1.04
GPC3-204ENST00000631057 TMEM120BA0PK00 339 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 TMEM191CA6NGB0 347 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 CITO14578 2027 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 OGTO15294 1046 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 CDH16O75309 829 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 TOM1L1O75674 476 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 DNAJC8O75937 253 aaPredicted RBP8.53□□□□□ -1.04
GPC3-204ENST00000631057 FARP2O94887 1054 aaPredicted RBP8.53□□□□□ -1.04
GPC3-204ENST00000631057 KRT1P04264 644 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 TMEM191BP0C7N4 346 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 HARSP12081 509 aaKnown RBP8.53□□□□□ -1.04
GPC3-204ENST00000631057 KLRC2P26717 231 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 SCTRP47872 440 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 IFNAR2P48551 515 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 VPS41P49754 854 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 STAT5BP51692 787 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 CNTN2Q02246 1040 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 PIGHQ14442 188 aaPredicted RBP8.53□□□□□ -1.04
GPC3-204ENST00000631057 SGSM1Q2NKQ1 1148 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 CCDC38Q502W7 563 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 EAPPQ56P03 285 aaPredicted RBP8.53□□□□□ -1.04
GPC3-204ENST00000631057 ZFYVE27Q5T4F4 411 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 DCUN1D2Q6PH85 259 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 KCNV1Q6PIU1 500 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 RIOX2Q8IUF8 465 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 ZBTB8OSQ8IWT0 167 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 SEPT1Q8WYJ6 367 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 TTC25Q96NG3 672 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 SLITRK1Q96PX8 696 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 PCYT2Q99447 389 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 JPH2Q9BR39 696 aaPredicted RBP8.53□□□□□ -1.04
GPC3-204ENST00000631057 PLCD4Q9BRC7 762 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 NIF3L1Q9GZT8 377 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 C2orf40Q9H1Z8 148 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 SLC40A1Q9NP59 571 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 DRG1Q9Y295 367 aaKnown RBP8.53□□□□□ -1.04
GPC3-204ENST00000631057 ACTL7BQ9Y614 415 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 GOLGB1Q14789 3259 aaKnown RBP8.53□□□□□ -1.04
GPC3-204ENST00000631057 KAT6AQ92794 2004 aa8.53□□□□□ -1.04
GPC3-204ENST00000631057 PAPPA2Q9BXP8 1791 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 O00370 1275 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 DNM1LO00429 736 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 DNALI1O14645 258 aaPredicted RBP8.52□□□□□ -1.04
GPC3-204ENST00000631057 LIASO43766 372 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 RASSF9O75901 435 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 EDN1P05305 212 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 PRKCBP05771 671 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 TGFB3P10600 412 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 EDNRBP24530 442 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 ABL2P42684 1182 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 MAGEA4P43358 317 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 NR1H3Q13133 447 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 XRCC4Q13426 336 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 TRPC3Q13507 836 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 MXD4Q14582 209 aaPredicted RBP8.52□□□□□ -1.04
GPC3-204ENST00000631057 DUOXA2Q1HG44 320 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 PRAMEF18Q5VWM3 479 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 DAB2IPQ5VWQ8 1189 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 CDCA2Q69YH5 1023 aaPredicted RBP8.52□□□□□ -1.04
GPC3-204ENST00000631057 HIBCHQ6NVY1 386 aaPredicted RBP8.52□□□□□ -1.04
GPC3-204ENST00000631057 VSTM1Q6UX27 236 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 METTL7BQ6UX53 244 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 SPOCD1Q6ZMY3 1216 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms