RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 SPATA16Q9BXB7 569 aa14.79□□□□□ -0.04
UBE3A-220ENST00000630424 TUT1Q9H6E5 874 aaKnown RBP14.79□□□□□ -0.04
UBE3A-220ENST00000630424 WDCPQ9H6R7 721 aa14.79□□□□□ -0.04
UBE3A-220ENST00000630424 METTL5Q9NRN9 209 aaKnown RBP14.79□□□□□ -0.04
UBE3A-220ENST00000630424 DPYDQ12882 1025 aa14.79□□□□□ -0.04
UBE3A-220ENST00000630424 CCDC144BQ3MJ40 725 aa14.79□□□□□ -0.04
UBE3A-220ENST00000630424 MAP3K14Q99558 947 aa14.79□□□□□ -0.04
UBE3A-220ENST00000630424 MKNK1Q9BUB5 465 aa14.79□□□□□ -0.04
UBE3A-220ENST00000630424 ACTR5Q9H9F9 607 aaPredicted RBP14.79□□□□□ -0.04
UBE3A-220ENST00000630424 RSAD1Q9HA92 442 aa14.79□□□□□ -0.04
UBE3A-220ENST00000630424 STX18Q9P2W9 335 aaKnown RBP14.79□□□□□ -0.04
UBE3A-220ENST00000630424 PNPLA6Q8IY17 1366 aa14.79□□□□□ -0.04
UBE3A-220ENST00000630424 MAP3K13O43283 966 aa14.79□□□□□ -0.04
UBE3A-220ENST00000630424 HLA-DPA1P20036 260 aa14.79□□□□□ -0.04
UBE3A-220ENST00000630424 ORC1Q13415 861 aa14.79□□□□□ -0.04
UBE3A-220ENST00000630424 TEDDM1Q5T9Z0 273 aa14.79□□□□□ -0.04
UBE3A-220ENST00000630424 ACOT1Q86TX2 421 aa14.79□□□□□ -0.04
UBE3A-220ENST00000630424 SNX31Q8N9S9 440 aa14.79□□□□□ -0.04
UBE3A-220ENST00000630424 OSMRQ99650 979 aa14.79□□□□□ -0.04
UBE3A-220ENST00000630424 AGPAT5Q9NUQ2 364 aa14.79□□□□□ -0.04
UBE3A-220ENST00000630424 SCOCQ9UIL1 159 aa14.79□□□□□ -0.04
UBE3A-220ENST00000630424 GTPBP10A4D1E9 387 aaKnown RBP14.78□□□□□ -0.04
UBE3A-220ENST00000630424 DDTLA6NHG4 134 aaPredicted RBP14.78□□□□□ -0.04
UBE3A-220ENST00000630424 CYB561D2O14569 222 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 THP07101 528 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 HERVK_113P62684 666 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 TXNRD3Q86VQ6 643 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 SPATA4Q8NEY3 305 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 CALML6Q8TD86 181 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 AKT1S1Q96B36 256 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 SPATC1LQ9H0A9 340 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 RNF208Q9H0X6 261 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 RRP15Q9Y3B9 282 aaKnown RBP14.78□□□□□ -0.04
UBE3A-220ENST00000630424 PCDHB12Q9Y5F1 795 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 ADCY10Q96PN6 1610 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 SLC26A4O43511 780 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 RPL10AP62906 217 aaKnown RBP14.78□□□□□ -0.04
UBE3A-220ENST00000630424 LRRC8EQ6NSJ5 796 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 C1orf131Q8NDD1 294 aaKnown RBP14.78□□□□□ -0.04
UBE3A-220ENST00000630424 DDI1Q8WTU0 396 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 CACNA2D2Q9NY47 1150 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 PSD3Q9NYI0 1048 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 SNX5Q9Y5X3 404 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 CHD1O14646 1710 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 ANGPT2O15123 496 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 KDM1AO60341 852 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 RNASEH1O60930 286 aaKnown RBP14.78□□□□□ -0.04
UBE3A-220ENST00000630424 KRT4P19013 534 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 GGCXP38435 758 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 PRKCQQ04759 706 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 BYSLQ13895 437 aaKnown RBP14.78□□□□□ -0.04
UBE3A-220ENST00000630424 C11orf96Q7Z7L8 435 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 OR9Q1Q8NGQ5 310 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 BRD8Q9H0E9 1235 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 TASP1Q9H6P5 420 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 XPO7Q9UIA9 1087 aaKnown RBP14.78□□□□□ -0.04
UBE3A-220ENST00000630424 GLI2P10070 1586 aa14.78□□□□□ -0.04
UBE3A-220ENST00000630424 TARSL2A2RTX5 802 aaKnown RBP14.77□□□□□ -0.04
UBE3A-220ENST00000630424 HEATR9A2RTY3 570 aa14.77□□□□□ -0.04
UBE3A-220ENST00000630424 MANSC4A6NHS7 340 aaPredicted RBP14.77□□□□□ -0.04
UBE3A-220ENST00000630424 F5H5T6 163 aa14.77□□□□□ -0.04
UBE3A-220ENST00000630424 CSDE1O75534 798 aaKnown RBP14.77□□□□□ -0.04
UBE3A-220ENST00000630424 ARP10275 920 aa14.77□□□□□ -0.04
UBE3A-220ENST00000630424 FXR2P51116 673 aaKnown RBP eCLIP14.77□□□□□ -0.042e-7■■■□□ 16.7
UBE3A-220ENST00000630424 GYS2P54840 703 aa14.77□□□□□ -0.04
UBE3A-220ENST00000630424 FMR1Q06787 632 aaKnown RBP eCLIP14.77□□□□□ -0.044e-6■■■□□ 15.2
UBE3A-220ENST00000630424 TROAPQ12815 778 aa14.77□□□□□ -0.04
UBE3A-220ENST00000630424 STAT4Q14765 748 aa14.77□□□□□ -0.04
UBE3A-220ENST00000630424 KRT72Q14CN4 511 aa14.77□□□□□ -0.04
UBE3A-220ENST00000630424 SGO1Q5FBB7 561 aa14.77□□□□□ -0.04
UBE3A-220ENST00000630424 ZNF513Q8N8E2 541 aaPredicted RBP14.77□□□□□ -0.04
UBE3A-220ENST00000630424 DPF2Q92785 391 aa14.77□□□□□ -0.04
UBE3A-220ENST00000630424 TMEM161AQ9NX61 479 aa14.77□□□□□ -0.04
UBE3A-220ENST00000630424 CHMP2BQ9UQN3 213 aa14.77□□□□□ -0.04
UBE3A-220ENST00000630424 PNMA6AP0CW24 399 aaPredicted RBP14.77□□□□□ -0.04
UBE3A-220ENST00000630424 PTGER2P43116 358 aa14.77□□□□□ -0.04
UBE3A-220ENST00000630424 PPP2R2AP63151 447 aa14.77□□□□□ -0.04
UBE3A-220ENST00000630424 CHST12Q9NRB3 414 aa14.77□□□□□ -0.04
UBE3A-220ENST00000630424 SETD4Q9NVD3 440 aa14.77□□□□□ -0.04
UBE3A-220ENST00000630424 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.77□□□□□ -0.044e-9■■■■□ 20.3
UBE3A-220ENST00000630424 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.77□□□□□ -0.04
UBE3A-220ENST00000630424 SSU72P8A0A1W2PR75 194 aa14.77□□□□□ -0.05
UBE3A-220ENST00000630424 SNRPFP62306 86 aaKnown RBP14.77□□□□□ -0.05
UBE3A-220ENST00000630424 MAPRE2Q15555 327 aa14.77□□□□□ -0.05
UBE3A-220ENST00000630424 ARL8AQ96BM9 186 aa14.77□□□□□ -0.05
UBE3A-220ENST00000630424 MTMR12Q9C0I1 747 aa14.77□□□□□ -0.05
UBE3A-220ENST00000630424 PAK5Q9P286 719 aa14.77□□□□□ -0.05
UBE3A-220ENST00000630424 CHORDC1Q9UHD1 332 aaPredicted RBP14.77□□□□□ -0.05
UBE3A-220ENST00000630424 TMX2Q9Y320 296 aa14.77□□□□□ -0.05
UBE3A-220ENST00000630424 IPPQ9Y573 584 aa14.77□□□□□ -0.05
UBE3A-220ENST00000630424 ITIH6Q6UXX5 1313 aa14.77□□□□□ -0.05
UBE3A-220ENST00000630424 ARHGEF40Q8TER5 1519 aa14.77□□□□□ -0.05
UBE3A-220ENST00000630424 E2F8A0AVK6 867 aa14.77□□□□□ -0.05
UBE3A-220ENST00000630424 SUPT3HB4E1H0 165 aa14.77□□□□□ -0.05
UBE3A-220ENST00000630424 NFIBO00712 420 aa14.77□□□□□ -0.05
UBE3A-220ENST00000630424 MTSS1O43312 755 aa14.77□□□□□ -0.05
UBE3A-220ENST00000630424 ARIH2O95376 493 aa14.77□□□□□ -0.05
UBE3A-220ENST00000630424 ALDH2P05091 517 aa14.77□□□□□ -0.05
UBE3A-220ENST00000630424 CYP2C8P10632 490 aa14.77□□□□□ -0.05
UBE3A-220ENST00000630424 SFSWAPQ12872 951 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms