RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 EFCAB12Q6NXP0 572 aa13.51□□□□□ -0.25
MSH6-215ENST00000622629 LLGL2Q6P1M3 1020 aa13.51□□□□□ -0.25
MSH6-215ENST00000622629 CD302Q8IX05 232 aa13.51□□□□□ -0.25
MSH6-215ENST00000622629 FAM71AQ8IYT1 594 aa13.51□□□□□ -0.25
MSH6-215ENST00000622629 ABRAQ8N0Z2 381 aa13.51□□□□□ -0.25
MSH6-215ENST00000622629 SLC10A4Q96EP9 437 aa13.51□□□□□ -0.25
MSH6-215ENST00000622629 CISHQ9NSE2 258 aa13.51□□□□□ -0.25
MSH6-215ENST00000622629 IGLV3-22A0A075B6J6 115 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 CREB3O43889 395 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 NCF2P19878 526 aaPredicted RBP13.5□□□□□ -0.25
MSH6-215ENST00000622629 TMEM62Q0P6H9 643 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 LVRNQ6Q4G3 990 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 CRLF3Q8IUI8 442 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 CCDC60Q8IWA6 550 aaPredicted RBP13.5□□□□□ -0.25
MSH6-215ENST00000622629 HACE1Q8IYU2 909 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 LRRC57Q8N9N7 239 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 SHC3Q92529 594 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 CTNNAL1Q9UBT7 734 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 SMG5Q9UPR3 1016 aaKnown RBP13.5□□□□□ -0.25
MSH6-215ENST00000622629 OGTO15294 1046 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 PSTPIP1O43586 416 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 KRT4P19013 534 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 FKBP1AP62942 108 aaKnown RBP13.5□□□□□ -0.25
MSH6-215ENST00000622629 CNTN2Q02246 1040 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 GCNT1Q02742 428 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 ITKQ08881 620 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 IER5Q5VY09 327 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 EIF1ADQ8N9N8 165 aaKnown RBP13.5□□□□□ -0.25
MSH6-215ENST00000622629 UBN1Q9NPG3 1134 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 NAALADL1Q9UQQ1 740 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 UBOX5O94941 541 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 ITGB3P05106 788 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 CTCFP49711 727 aaPredicted RBP13.5□□□□□ -0.25
MSH6-215ENST00000622629 TGFB2P61812 414 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 ATG16L1Q676U5 607 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 DUPD1Q68J44 220 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 HEATR6Q6AI08 1181 aaKnown RBP13.5□□□□□ -0.25
MSH6-215ENST00000622629 PWWP2AQ96N64 755 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 PCDHB18PQ96TA0 734 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 DCLK3Q9C098 648 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 MAP3K20Q9NYL2 800 aaKnown RBP13.5□□□□□ -0.25
MSH6-215ENST00000622629 MARCOQ9UEW3 520 aaPredicted RBP13.5□□□□□ -0.25
MSH6-215ENST00000622629 ATP5HO75947 161 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 PGK2P07205 417 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 CCNG2Q16589 344 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 NIPA1Q7RTP0 329 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 PRUNE1Q86TP1 453 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 SEMA4DQ92854 862 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 LENG9Q96B70 501 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 VPS11Q9H270 941 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 SLC5A4Q9NY91 659 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 USH1CQ9Y6N9 552 aa13.5□□□□□ -0.25
MSH6-215ENST00000622629 PLIN4Q96Q06 1357 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 DIAPH2O60879 1101 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 SESN2P58004 480 aaPredicted RBP13.49□□□□□ -0.25
MSH6-215ENST00000622629 OVGP1Q12889 678 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 NUDCD3Q8IVD9 361 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 ACTL9Q8TC94 416 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 KREMEN1Q96MU8 473 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 ACAP3Q96P50 834 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 NUDCD1Q96RS6 583 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 KLHL8Q9P2G9 620 aaPredicted RBP13.49□□□□□ -0.25
MSH6-215ENST00000622629 WDR35Q9P2L0 1181 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 PCDHA2Q9Y5H9 948 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 MYH6P13533 1939 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 PDGFRBP09619 1106 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 LCP1P13796 627 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 OTUD4Q01804 1114 aaKnown RBP13.49□□□□□ -0.25
MSH6-215ENST00000622629 ATP13A4Q4VNC1 1196 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 MFSD7Q6UXD7 560 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 CGRRF1Q99675 332 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 UBIAD1Q9Y5Z9 338 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 NCANO14594 1321 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 ASTN2O75129 1339 aaPredicted RBP13.49□□□□□ -0.25
MSH6-215ENST00000622629 ZSCAN5DPP0CG00 497 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 RAP1GAPP47736 663 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 VSIG10LQ86VR7 867 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 WDR75Q8IWA0 830 aaKnown RBP13.49□□□□□ -0.25
MSH6-215ENST00000622629 EXD1Q8NHP7 514 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 PGM2Q96G03 612 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 SH3GL2Q99962 352 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 FOXP3Q9BZS1 431 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 A1CFQ9NQ94 594 aaKnown RBP13.49□□□□□ -0.25
MSH6-215ENST00000622629 ZC3H7BQ9UGR2 993 aaKnown RBP13.49□□□□□ -0.25
MSH6-215ENST00000622629 COG5Q9UP83 839 aa13.49□□□□□ -0.25
MSH6-215ENST00000622629 DCDC2CA8MYV0 355 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 PPFIA2O75334 1257 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 LUC7L3O95232 432 aaKnown RBP13.48□□□□□ -0.25
MSH6-215ENST00000622629 TFDP3Q5H9I0 405 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 ATXN7L3BQ96GX2 97 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 SMARCAD1Q9H4L7 1026 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.48□□□□□ -0.25
MSH6-215ENST00000622629 TCRBV7S2A1N4TA0A589 114 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 RAD23BP54727 409 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 SPIRE1Q08AE8 756 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 TMEM132DQ14C87 1099 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 ANO5Q75V66 913 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 CCDC33Q8N5R6 958 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 C3orf20Q8ND61 904 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 ZSWIM2Q8NEG5 633 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms