RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 NR3C2P08235 984 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 YWHABP31946 246 aaKnown RBP15.1■□□□□ 0.01
EPHB4-210ENST00000616502 SNRNP35Q16560 246 aaKnown RBP15.1■□□□□ 0.01
EPHB4-210ENST00000616502 HIF1AQ16665 826 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 GRAMD1BQ3KR37 738 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 RBBP8NLQ8NC74 664 aaPredicted RBP15.1■□□□□ 0.01
EPHB4-210ENST00000616502 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.1■□□□□ 0.013e-7■■■■□ 22.6
EPHB4-210ENST00000616502 DCLK3Q9C098 648 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 ANGPTL2Q9UKU9 493 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 AHDC1Q5TGY3 1603 aaPredicted RBP15.1■□□□□ 0.01
EPHB4-210ENST00000616502 RFX1P22670 979 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 RNF43Q68DV7 783 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 CASC4Q6P4E1 433 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 TRIM50Q86XT4 487 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 THNSL1Q8IYQ7 743 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 PDIK1LQ8N165 341 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 TAS1R2Q8TE23 839 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 CAMKK2Q96RR4 588 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 VCX3BQ9H321 246 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 MRPL47Q9HD33 250 aaKnown RBP15.1■□□□□ 0.01
EPHB4-210ENST00000616502 VCX3AQ9NNX9 186 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 CHKBQ9Y259 395 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 A0A1W2PPM1 405 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 TJP3O95049 919 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 SSTR1P30872 391 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 QARSP47897 775 aaKnown RBP15.1■□□□□ 0.01
EPHB4-210ENST00000616502 ALDH18A1P54886 795 aaKnown RBP15.1■□□□□ 0.01
EPHB4-210ENST00000616502 MFSD5Q6N075 450 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 SDCCAG8Q86SQ7 713 aaPredicted RBP15.1■□□□□ 0.01
EPHB4-210ENST00000616502 FAM160B2Q86V87 743 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 PPM1NQ8N819 430 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 UCMAQ8WVF2 138 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 ABTB1Q969K4 478 aaPredicted RBP15.1■□□□□ 0.01
EPHB4-210ENST00000616502 NSL1Q96IY1 281 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 FAM111AQ96PZ2 611 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 IWS1Q96ST2 819 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 NDE1Q9NXR1 346 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 TELO2Q9Y4R8 837 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 SHANK3Q9BYB0 1731 aa15.1■□□□□ 0.01
EPHB4-210ENST00000616502 INO80B-WBP1J3KQ70 363 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 TBX3O15119 743 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 TOM1L1O75674 476 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 PECAM1P16284 738 aaPredicted RBP15.09■□□□□ 0.01
EPHB4-210ENST00000616502 ATP6V1C1P21283 382 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 SERPINB3P29508 390 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 SREBF1P36956 1147 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 LAMB3Q13751 1172 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 ATP13A4Q4VNC1 1196 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 RGS9BPQ6ZS82 235 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 MCF2L2Q86YR7 1114 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 LRRC71Q8N4P6 559 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 TTC25Q96NG3 672 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 INO80BQ9C086 356 aaPredicted RBP15.09■□□□□ 0.01
EPHB4-210ENST00000616502 ETAA1Q9NY74 926 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 PSMC3IPQ9P2W1 217 aaPredicted RBP15.09■□□□□ 0.01
EPHB4-210ENST00000616502 C2orf71A6NGG8 1288 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 FAM182AQ5T1J6 154 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 ACAD10Q6JQN1 1059 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 OTOP1Q7RTM1 612 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 LRRC6Q86X45 466 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 DEPTORQ8TB45 409 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 ZNF75CPQ92670 426 aaPredicted RBP15.09■□□□□ 0.01
EPHB4-210ENST00000616502 TMEM121Q9BTD3 319 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 POLR3CQ9BUI4 534 aaPredicted RBP15.09■□□□□ 0.01
EPHB4-210ENST00000616502 APOL6Q9BWW8 343 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 MOV10L1Q9BXT6 1211 aaKnown RBP15.09■□□□□ 0.01
EPHB4-210ENST00000616502 MANSC1Q9H8J5 431 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 FBXO6Q9NRD1 293 aaPredicted RBP15.09■□□□□ 0.01
EPHB4-210ENST00000616502 PCSK1NQ9UHG2 260 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 CHMP2BQ9UQN3 213 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 SMCHD1A6NHR9 2005 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 KIF22Q14807 665 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 GJC2Q5T442 439 aaPredicted RBP15.09■□□□□ 0.01
EPHB4-210ENST00000616502 DNAJC24Q6P3W2 148 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 ZNF280CQ8ND82 737 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 SLC26A7Q8TE54 656 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 TUFT1Q9NNX1 390 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 NMRK1Q9NWW6 199 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 WRAP73Q9P2S5 460 aaPredicted RBP15.09■□□□□ 0.01
EPHB4-210ENST00000616502 LTBP4Q8N2S1 1624 aa15.09■□□□□ 0.01
EPHB4-210ENST00000616502 COPEO14579 308 aa15.08■□□□□ 0.01
EPHB4-210ENST00000616502 TPBGLP0DKB5 382 aa15.08■□□□□ 0.01
EPHB4-210ENST00000616502 SNHG28P0DPA3 235 aa15.08■□□□□ 0.01
EPHB4-210ENST00000616502 ARL4CP56559 192 aa15.08■□□□□ 0.01
EPHB4-210ENST00000616502 WDR4P57081 412 aaKnown RBP15.08■□□□□ 0.01
EPHB4-210ENST00000616502 SMTNL2Q2TAL5 461 aa15.08■□□□□ 0.01
EPHB4-210ENST00000616502 KHDC1Q4VXA5 237 aaKnown RBP15.08■□□□□ 0.01
EPHB4-210ENST00000616502 FOXR2Q6PJQ5 311 aa15.08■□□□□ 0.01
EPHB4-210ENST00000616502 RFX6Q8HWS3 928 aa15.08■□□□□ 0.01
EPHB4-210ENST00000616502 VIL1P09327 827 aaKnown RBP15.08■□□□□ 0
EPHB4-210ENST00000616502 GZMAP12544 262 aa15.08■□□□□ 0
EPHB4-210ENST00000616502 MAP7Q14244 749 aa15.08■□□□□ 0
EPHB4-210ENST00000616502 HYIQ5T013 277 aa15.08■□□□□ 0
EPHB4-210ENST00000616502 RFWD3Q6PCD5 774 aa15.08■□□□□ 0
EPHB4-210ENST00000616502 RASSF3Q86WH2 238 aa15.08■□□□□ 0
EPHB4-210ENST00000616502 ZDHHC14Q8IZN3 488 aa15.08■□□□□ 0
EPHB4-210ENST00000616502 SEC14L1Q92503 715 aa15.08■□□□□ 0
EPHB4-210ENST00000616502 MXRA8Q9BRK3 442 aa15.08■□□□□ 0
EPHB4-210ENST00000616502 PIDD1Q9HB75 910 aa15.08■□□□□ 0
EPHB4-210ENST00000616502 KIAA1586Q9HCI6 787 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms