RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 TRAPPC3O43617 180 aa13.71□□□□□ -0.21
PRKN-210ENST00000612540 SOX5P35711 763 aa13.71□□□□□ -0.21
PRKN-210ENST00000612540 CDH8P55286 799 aa13.71□□□□□ -0.21
PRKN-210ENST00000612540 JAM2P57087 298 aa13.71□□□□□ -0.21
PRKN-210ENST00000612540 TJAP1Q5JTD0 557 aa13.71□□□□□ -0.21
PRKN-210ENST00000612540 TMEM270Q6UE05 265 aa13.71□□□□□ -0.21
PRKN-210ENST00000612540 KCNT2Q6UVM3 1135 aa13.71□□□□□ -0.21
PRKN-210ENST00000612540 METTL23Q86XA0 190 aa13.71□□□□□ -0.21
PRKN-210ENST00000612540 TOP6BLQ8N6T0 577 aa13.71□□□□□ -0.21
PRKN-210ENST00000612540 RBBP8NLQ8NC74 664 aaPredicted RBP13.71□□□□□ -0.21
PRKN-210ENST00000612540 OR8K1Q8NGG5 319 aa13.71□□□□□ -0.21
PRKN-210ENST00000612540 SHC3Q92529 594 aa13.71□□□□□ -0.21
PRKN-210ENST00000612540 SDCBP2Q9H190 292 aa13.71□□□□□ -0.21
PRKN-210ENST00000612540 NUCKS1Q9H1E3 243 aaKnown RBP13.71□□□□□ -0.21
PRKN-210ENST00000612540 SNX25Q9H3E2 840 aa13.71□□□□□ -0.21
PRKN-210ENST00000612540 AAASQ9NRG9 546 aa13.71□□□□□ -0.21
PRKN-210ENST00000612540 CISHQ9NSE2 258 aa13.71□□□□□ -0.21
PRKN-210ENST00000612540 MARCH5Q9NX47 278 aa13.71□□□□□ -0.21
PRKN-210ENST00000612540 GDAP2Q9NXN4 497 aa13.71□□□□□ -0.21
PRKN-210ENST00000612540 L1RE1Q9UN81 338 aa13.71□□□□□ -0.21
PRKN-210ENST00000612540 TIMM13Q9Y5L4 95 aaPredicted RBP13.71□□□□□ -0.21
PRKN-210ENST00000612540 SF3B1O75533 1304 aaKnown RBP eCLIP13.7□□□□□ -0.22
PRKN-210ENST00000612540 REV3LO60673 3130 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 LCHNA4D1U4 455 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 FOXN3O00409 490 aaPredicted RBP13.7□□□□□ -0.22
PRKN-210ENST00000612540 MYOGP15173 224 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 FERP16591 822 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 PAX3P23760 479 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 AARSP49588 968 aaKnown RBP eCLIP13.7□□□□□ -0.22
PRKN-210ENST00000612540 ELAVL2Q12926 359 aaKnown RBP13.7□□□□□ -0.22
PRKN-210ENST00000612540 ARID5BQ14865 1188 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 SOWAHAQ2M3V2 549 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 ZNF394Q53GI3 561 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 TDRD12Q587J7 1177 aaKnown RBP13.7□□□□□ -0.22
PRKN-210ENST00000612540 WSCD1Q658N2 575 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 FUT10Q6P4F1 479 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 CD300LGQ6UXG3 332 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 TMEM173Q86WV6 379 aaPredicted RBP13.7□□□□□ -0.22
PRKN-210ENST00000612540 CEP57Q86XR8 500 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 FMNL3Q8IVF7 1028 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 PDCL2Q8N4E4 241 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 TC2NQ8N9U0 490 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 OR6B3Q8NGW1 331 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 TMEM169Q96HH4 297 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 FAXDC2Q96IV6 333 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 SUSD3Q96L08 255 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 PPP1R9BQ96SB3 815 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 MRPL45Q9BRJ2 306 aaKnown RBP13.7□□□□□ -0.22
PRKN-210ENST00000612540 ABHD10Q9NUJ1 306 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 SPG21Q9NZD8 308 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 PUF60Q9UHX1 559 aaKnown RBP13.7□□□□□ -0.22
PRKN-210ENST00000612540 MYO6Q9UM54 1294 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 PCDHB8Q9UN66 801 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 PCDHB12Q9Y5F1 795 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 PCDHA11Q9Y5I1 949 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 MYH10P35580 1976 aa13.7□□□□□ -0.22
PRKN-210ENST00000612540 CARNS1A5YM72 827 aa13.69□□□□□ -0.22
PRKN-210ENST00000612540 A8MXQ7 604 aa13.69□□□□□ -0.22
PRKN-210ENST00000612540 CYP26A1O43174 497 aa13.69□□□□□ -0.22
PRKN-210ENST00000612540 CCDC172P0C7W6 258 aa13.69□□□□□ -0.22
PRKN-210ENST00000612540 IGFBP4P22692 258 aa13.69□□□□□ -0.22
PRKN-210ENST00000612540 CTNNB1P35222 781 aa13.69□□□□□ -0.22
PRKN-210ENST00000612540 PPM1AP35813 382 aa13.69□□□□□ -0.22
PRKN-210ENST00000612540 NDST1P52848 882 aa13.69□□□□□ -0.22
PRKN-210ENST00000612540 ORC1Q13415 861 aa13.69□□□□□ -0.22
PRKN-210ENST00000612540 CCDC85BQ15834 202 aaPredicted RBP13.69□□□□□ -0.22
PRKN-210ENST00000612540 FAM171A1Q5VUB5 890 aa13.69□□□□□ -0.22
PRKN-210ENST00000612540 E4F1Q66K89 784 aaPredicted RBP13.69□□□□□ -0.22
PRKN-210ENST00000612540 SLC39A11Q8N1S5 342 aa13.69□□□□□ -0.22
PRKN-210ENST00000612540 TMEM86AQ8N2M4 240 aa13.69□□□□□ -0.22
PRKN-210ENST00000612540 TTC39CQ8N584 583 aa13.69□□□□□ -0.22
PRKN-210ENST00000612540 SP7Q8TDD2 431 aaPredicted RBP13.69□□□□□ -0.22
PRKN-210ENST00000612540 BCL7CQ8WUZ0 217 aaPredicted RBP13.69□□□□□ -0.22
PRKN-210ENST00000612540 JAKMIP2Q96AA8 810 aa13.69□□□□□ -0.22
PRKN-210ENST00000612540 IGSF21Q96ID5 467 aa13.69□□□□□ -0.22
PRKN-210ENST00000612540 DNAJC7Q99615 494 aa13.69□□□□□ -0.22
PRKN-210ENST00000612540 GPR88Q9GZN0 384 aa13.69□□□□□ -0.22
PRKN-210ENST00000612540 DNAI2Q9GZS0 605 aa13.69□□□□□ -0.22
PRKN-210ENST00000612540 HMGXB4Q9UGU5 601 aa13.69□□□□□ -0.22
PRKN-210ENST00000612540 DSEQ9UL01 958 aa13.69□□□□□ -0.22
PRKN-210ENST00000612540 BARX2Q9UMQ3 279 aaPredicted RBP13.69□□□□□ -0.22
PRKN-210ENST00000612540 TRANK1O15050 2925 aa13.68□□□□□ -0.22
PRKN-210ENST00000612540 M0QZQ0 153 aa13.68□□□□□ -0.22
PRKN-210ENST00000612540 NRDCO43847 1150 aa13.68□□□□□ -0.22
PRKN-210ENST00000612540 CILPO75339 1184 aa13.68□□□□□ -0.22
PRKN-210ENST00000612540 TACC1O75410 805 aa13.68□□□□□ -0.22
PRKN-210ENST00000612540 PDGFRBP09619 1106 aa13.68□□□□□ -0.22
PRKN-210ENST00000612540 CD19P15391 556 aa13.68□□□□□ -0.22
PRKN-210ENST00000612540 ACO1P21399 889 aaKnown RBP13.68□□□□□ -0.22
PRKN-210ENST00000612540 WARSP23381 471 aaKnown RBP13.68□□□□□ -0.22
PRKN-210ENST00000612540 TKTP29401 623 aaKnown RBP13.68□□□□□ -0.22
PRKN-210ENST00000612540 GNL1P36915 607 aaPredicted RBP13.68□□□□□ -0.22
PRKN-210ENST00000612540 PDE6CP51160 858 aa13.68□□□□□ -0.22
PRKN-210ENST00000612540 KLHL30Q0D2K2 578 aa13.68□□□□□ -0.22
PRKN-210ENST00000612540 PPP2R2DQ66LE6 453 aa13.68□□□□□ -0.22
PRKN-210ENST00000612540 OVOS1Q6IE37 1185 aa13.68□□□□□ -0.22
PRKN-210ENST00000612540 DPH6Q7L8W6 267 aa13.68□□□□□ -0.22
PRKN-210ENST00000612540 OSTM1Q86WC4 334 aa13.68□□□□□ -0.22
PRKN-210ENST00000612540 FAM71AQ8IYT1 594 aa13.68□□□□□ -0.22
PRKN-210ENST00000612540 UBR7Q8N806 425 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms