RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 SLC5A5Q92911 643 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 GJA10Q969M2 543 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 JAKMIP1Q96N16 626 aaKnown RBP7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 AGXT2Q9BYV1 514 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TRIM6Q9C030 488 aaPredicted RBP7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 GKN1Q9NS71 199 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 APOBEC2Q9Y235 224 aaKnown RBP7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PCDHB9Q9Y5E1 797 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SLC12A7Q9Y666 1083 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CYP46A1Q9Y6A2 500 aa7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ATXN2Q99700 1313 aaKnown RBP7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 MUC22E2RYF6 1773 aaPredicted RBP7.92□□□□□ -1.14
PTCHD3P1-201ENST00000612350 DOPEY2Q9Y3R5 2298 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TEP1Q99973 2627 aaKnown RBP7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TEX51A0A1B0GUA7 166 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 A0A1B0GUA9 196 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 B8ZZF3 427 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 I3L4J1 428 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 B4GALT5O43286 388 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 GAS7O60861 476 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PSMD10O75832 226 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 B3GAT3O94766 335 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PRAMEF12O95522 483 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CFIP05156 583 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PRKCBP05771 671 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SERPINF2P08697 491 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ITPKAP23677 461 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 WEE1P30291 646 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 HOXD12P35452 270 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 P2RY2P41231 377 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 DPP6P42658 865 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 BRCC3P46736 316 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 MBTD1Q05BQ5 628 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 GFPT1Q06210 699 aaPredicted RBP7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 RUNX3Q13761 415 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 MRPL58Q14197 206 aaKnown RBP7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ANKRD1Q15327 319 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 DUOXA1Q1HG43 343 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 COLEC12Q5KU26 742 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TPGS2Q68CL5 300 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SLC27A1Q6PCB7 646 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 NFXL1Q6ZNB6 911 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 MIER3Q7Z3K6 550 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 FANCBQ8NB91 859 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 C3orf58Q8NDZ4 430 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 MDGA1Q8NFP4 955 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 RLN3Q8WXF3 142 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SLC7A3Q8WY07 619 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TATDN2Q93075 761 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ACDQ96AP0 544 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 FCRL3Q96P31 734 aaPredicted RBP7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 POLR3CQ9BUI4 534 aaPredicted RBP7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 GLT8D2Q9H1C3 349 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 DNAJC25Q9H1X3 360 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TOR4AQ9NXH8 423 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TPCN1Q9ULQ1 816 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TBX20Q9UMR3 447 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CNTNAP5Q8WYK1 1306 aa7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 COL5A1P20908 1838 aaPredicted RBP7.91□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PIEZO2Q9H5I5 2752 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TRIP11Q15643 1979 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PLXND1Q9Y4D7 1925 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TSC2P49815 1807 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CCDC196A0A1B0GTZ2 297 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 INO80B-WBP1J3KQ70 363 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SMAPO00193 183 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 U2AF2P26368 475 aaKnown RBP eCLIP7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 EIF2S3P41091 472 aaKnown RBP7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 MCM2P49736 904 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CLCNKBP51801 687 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ARPP19P56211 112 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 EVCP57679 992 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 POU5F1BQ06416 359 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 NCBP1Q09161 790 aaKnown RBP7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 FUT2Q10981 343 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 UPP1Q16831 310 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SPDYCQ5MJ68 293 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 LRCH2Q5VUJ6 765 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 LYSMD4Q5XG99 296 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ANO7Q6IWH7 933 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 GAREM2Q75VX8 874 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 GPR155Q7Z3F1 870 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 RAB11FIP4Q86YS3 637 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 NAXDQ8IW45 347 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CEP76Q8TAP6 659 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 P2RY13Q9BPV8 354 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TEKT3Q9BXF9 490 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 BACH2Q9BYV9 841 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 C22orf23Q9BZE7 217 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SEMA4CQ9C0C4 833 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 EBF3Q9H4W6 596 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 RBM28Q9NW13 759 aaKnown RBP7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 BARHL2Q9NY43 387 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 AFF4Q9UHB7 1163 aaKnown RBP7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 FBXL5Q9UKA1 691 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 MAFFQ9ULX9 164 aa7.9□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ARID2Q68CP9 1835 aa7.89□□□□□ -1.15
PTCHD3P1-201ENST00000612350 ANTXRLA6NF34 631 aa7.89□□□□□ -1.15
PTCHD3P1-201ENST00000612350 hCG_1984214I3L0E3 225 aa7.89□□□□□ -1.15
PTCHD3P1-201ENST00000612350 TRAPPC3O43617 180 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms