RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 ECE1P42892 770 aa23.58■■□□□ 1.37
SHANK2-220ENST00000608988 VCPP55072 806 aaKnown RBP23.58■■□□□ 1.37
SHANK2-220ENST00000608988 NOMO3P69849 1222 aa23.58■■□□□ 1.37
SHANK2-220ENST00000608988 GHRHRQ02643 423 aa23.58■■□□□ 1.37
SHANK2-220ENST00000608988 LDHDQ86WU2 507 aa23.58■■□□□ 1.37
SHANK2-220ENST00000608988 ABRAQ8N0Z2 381 aa23.58■■□□□ 1.37
SHANK2-220ENST00000608988 ATP11CQ8NB49 1132 aa23.58■■□□□ 1.37
SHANK2-220ENST00000608988 TTC8Q8TAM2 541 aa23.58■■□□□ 1.37
SHANK2-220ENST00000608988 FEZF2Q8TBJ5 459 aa23.58■■□□□ 1.37
SHANK2-220ENST00000608988 PTCD3Q96EY7 689 aaKnown RBP23.58■■□□□ 1.37
SHANK2-220ENST00000608988 NSL1Q96IY1 281 aa23.58■■□□□ 1.37
SHANK2-220ENST00000608988 SENP7Q9BQF6 1050 aa23.58■■□□□ 1.37
SHANK2-220ENST00000608988 TRIM55Q9BYV6 548 aa23.58■■□□□ 1.37
SHANK2-220ENST00000608988 TOPORSQ9NS56 1045 aaPredicted RBP23.58■■□□□ 1.37
SHANK2-220ENST00000608988 FEM1BQ9UK73 627 aa23.58■■□□□ 1.37
SHANK2-220ENST00000608988 ASTN2O75129 1339 aaPredicted RBP23.58■■□□□ 1.36
SHANK2-220ENST00000608988 CD58P19256 250 aa23.58■■□□□ 1.36
SHANK2-220ENST00000608988 SFNP31947 248 aa23.58■■□□□ 1.36
SHANK2-220ENST00000608988 NPTX2P47972 431 aa23.58■■□□□ 1.36
SHANK2-220ENST00000608988 CCDC6Q16204 474 aa23.58■■□□□ 1.36
SHANK2-220ENST00000608988 TKFCQ3LXA3 575 aa23.58■■□□□ 1.36
SHANK2-220ENST00000608988 DACT2Q5SW24 774 aa23.58■■□□□ 1.36
SHANK2-220ENST00000608988 FAM102BQ5T8I3 360 aa23.58■■□□□ 1.36
SHANK2-220ENST00000608988 ADGRD1Q6QNK2 874 aa23.58■■□□□ 1.36
SHANK2-220ENST00000608988 SPDYE1Q8NFV5 336 aaPredicted RBP23.58■■□□□ 1.36
SHANK2-220ENST00000608988 MAK16Q9BXY0 300 aaKnown RBP23.58■■□□□ 1.36
SHANK2-220ENST00000608988 DNPEPQ9ULA0 475 aa23.58■■□□□ 1.36
SHANK2-220ENST00000608988 ENTPD5O75356 428 aa23.57■■□□□ 1.36
SHANK2-220ENST00000608988 MTDHQ86UE4 582 aaKnown RBP23.57■■□□□ 1.36
SHANK2-220ENST00000608988 ZBED8Q8IZ13 594 aa23.57■■□□□ 1.36
SHANK2-220ENST00000608988 ARHGAP24Q8N264 748 aa23.57■■□□□ 1.36
SHANK2-220ENST00000608988 SAMD3Q8N6K7 520 aa23.57■■□□□ 1.36
SHANK2-220ENST00000608988 POMGNT1Q8WZA1 660 aa23.57■■□□□ 1.36
SHANK2-220ENST00000608988 CADM1Q9BY67 442 aaKnown RBP23.57■■□□□ 1.36
SHANK2-220ENST00000608988 FHDC1Q9C0D6 1143 aaPredicted RBP23.57■■□□□ 1.36
SHANK2-220ENST00000608988 NPHS2Q9NP85 383 aa23.57■■□□□ 1.36
SHANK2-220ENST00000608988 KMT5AQ9NQR1 393 aa23.57■■□□□ 1.36
SHANK2-220ENST00000608988 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.57■■□□□ 1.362e-8■■■□□ 18.7
SHANK2-220ENST00000608988 DDX56Q9NY93 547 aaKnown RBP23.57■■□□□ 1.36
SHANK2-220ENST00000608988 SMCHD1A6NHR9 2005 aa23.57■■□□□ 1.36
SHANK2-220ENST00000608988 ANKRD31Q8N7Z5 1873 aa23.56■■□□□ 1.36
SHANK2-220ENST00000608988 DENND3A2RUS2 1198 aa23.56■■□□□ 1.36
SHANK2-220ENST00000608988 SIGLEC16A6NMB1 481 aa23.56■■□□□ 1.36
SHANK2-220ENST00000608988 H0YCG3 227 aa23.56■■□□□ 1.36
SHANK2-220ENST00000608988 TLR3O15455 904 aaKnown RBP23.56■■□□□ 1.36
SHANK2-220ENST00000608988 SNUPNO95149 360 aaKnown RBP23.56■■□□□ 1.36
SHANK2-220ENST00000608988 KRT4P19013 534 aa23.56■■□□□ 1.36
SHANK2-220ENST00000608988 ROR2Q01974 943 aaKnown RBP23.56■■□□□ 1.36
SHANK2-220ENST00000608988 OASLQ15646 514 aaKnown RBP23.56■■□□□ 1.36
SHANK2-220ENST00000608988 SMYD5Q6GMV2 418 aa23.56■■□□□ 1.36
SHANK2-220ENST00000608988 CHSY1Q86X52 802 aa23.56■■□□□ 1.36
SHANK2-220ENST00000608988 SUPT20HQ8NEM7 779 aa23.56■■□□□ 1.36
SHANK2-220ENST00000608988 RDM1Q8NG50 284 aa23.56■■□□□ 1.36
SHANK2-220ENST00000608988 TRAPPC9Q96Q05 1148 aa23.56■■□□□ 1.36
SHANK2-220ENST00000608988 NMRK1Q9NWW6 199 aa23.56■■□□□ 1.36
SHANK2-220ENST00000608988 RABGEF1Q9UJ41 708 aa23.56■■□□□ 1.36
SHANK2-220ENST00000608988 SLC34A1Q06495 639 aa23.56■■□□□ 1.36
SHANK2-220ENST00000608988 MAPK6Q16659 721 aa23.56■■□□□ 1.36
SHANK2-220ENST00000608988 HIF1AQ16665 826 aa23.56■■□□□ 1.36
SHANK2-220ENST00000608988 BRDTQ58F21 947 aaPredicted RBP23.56■■□□□ 1.36
SHANK2-220ENST00000608988 TMEM154Q6P9G4 183 aa23.56■■□□□ 1.36
SHANK2-220ENST00000608988 DHX37Q8IY37 1157 aaKnown RBP23.56■■□□□ 1.36
SHANK2-220ENST00000608988 MIPEPQ99797 713 aa23.56■■□□□ 1.36
SHANK2-220ENST00000608988 C11orf70Q9BRQ4 267 aa23.56■■□□□ 1.36
SHANK2-220ENST00000608988 SYNCQ9H7C4 482 aa23.56■■□□□ 1.36
SHANK2-220ENST00000608988 CNTN6Q9UQ52 1028 aa23.56■■□□□ 1.36
SHANK2-220ENST00000608988 ZNF646O15015 1829 aaPredicted RBP23.55■■□□□ 1.36
SHANK2-220ENST00000608988 A0A1W2PPM1 405 aa23.55■■□□□ 1.36
SHANK2-220ENST00000608988 ANKRD33BA6NCL7 494 aa23.55■■□□□ 1.36
SHANK2-220ENST00000608988 A8MXQ7 604 aa23.55■■□□□ 1.36
SHANK2-220ENST00000608988 GSC2O15499 205 aa23.55■■□□□ 1.36
SHANK2-220ENST00000608988 SMIM24O75264 130 aa23.55■■□□□ 1.36
SHANK2-220ENST00000608988 KRT1P04264 644 aa23.55■■□□□ 1.36
SHANK2-220ENST00000608988 SP100P23497 879 aaPredicted RBP23.55■■□□□ 1.36
SHANK2-220ENST00000608988 SSR1P43307 286 aaKnown RBP23.55■■□□□ 1.36
SHANK2-220ENST00000608988 PAPOLAP51003 745 aaKnown RBP23.55■■□□□ 1.36
SHANK2-220ENST00000608988 ARL4CP56559 192 aa23.55■■□□□ 1.36
SHANK2-220ENST00000608988 RTP1P59025 263 aa23.55■■□□□ 1.36
SHANK2-220ENST00000608988 PDIA2Q13087 525 aaKnown RBP23.55■■□□□ 1.36
SHANK2-220ENST00000608988 FASTKD3Q14CZ7 662 aaKnown RBP23.55■■□□□ 1.36
SHANK2-220ENST00000608988 PSMD6Q15008 389 aa23.55■■□□□ 1.36
SHANK2-220ENST00000608988 NBPF20Q3BBV1 942 aa23.55■■□□□ 1.36
SHANK2-220ENST00000608988 XKR9Q5GH70 373 aa23.55■■□□□ 1.36
SHANK2-220ENST00000608988 SLC39A4Q6P5W5 647 aa23.55■■□□□ 1.36
SHANK2-220ENST00000608988 SPOCD1Q6ZMY3 1216 aa23.55■■□□□ 1.36
SHANK2-220ENST00000608988 MCF2L2Q86YR7 1114 aa23.55■■□□□ 1.36
SHANK2-220ENST00000608988 ZNF276Q8N554 614 aa23.55■■□□□ 1.36
SHANK2-220ENST00000608988 ACSS3Q9H6R3 686 aa23.55■■□□□ 1.36
SHANK2-220ENST00000608988 GPRC5CQ9NQ84 441 aa23.55■■□□□ 1.36
SHANK2-220ENST00000608988 MAP3K20Q9NYL2 800 aaKnown RBP23.55■■□□□ 1.36
SHANK2-220ENST00000608988 SCOCQ9UIL1 159 aa23.55■■□□□ 1.36
SHANK2-220ENST00000608988 EFR3BQ9Y2G0 817 aa23.55■■□□□ 1.36
SHANK2-220ENST00000608988 ENO4A6NNW6 628 aa23.54■■□□□ 1.36
SHANK2-220ENST00000608988 ACO1P21399 889 aaKnown RBP23.54■■□□□ 1.36
SHANK2-220ENST00000608988 TAP1Q03518 808 aa23.54■■□□□ 1.36
SHANK2-220ENST00000608988 KHDC1Q4VXA5 237 aaKnown RBP23.54■■□□□ 1.36
SHANK2-220ENST00000608988 CWF19L1Q69YN2 538 aaKnown RBP23.54■■□□□ 1.36
SHANK2-220ENST00000608988 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.54■■□□□ 1.36
SHANK2-220ENST00000608988 BANPQ8N9N5 519 aa23.54■■□□□ 1.36
SHANK2-220ENST00000608988 PPFIBP2Q8ND30 876 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms