RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 LEMD2Q8NC56 503 aa20.67■□□□□ 0.9
SRSF4-206ENST00000605204 OR5B17Q8NGF7 314 aa20.67■□□□□ 0.9
SRSF4-206ENST00000605204 SMARCE1Q969G3 411 aa20.67■□□□□ 0.9
SRSF4-206ENST00000605204 CCDC127Q96BQ5 260 aa20.67■□□□□ 0.9
SRSF4-206ENST00000605204 AVENQ9NQS1 362 aaPredicted RBP20.67■□□□□ 0.9
SRSF4-206ENST00000605204 SIX4Q9UIU6 781 aa20.67■□□□□ 0.9
SRSF4-206ENST00000605204 CFAP54Q96N23 3096 aa20.66■□□□□ 0.9
SRSF4-206ENST00000605204 CCL16O15467 120 aa20.66■□□□□ 0.9
SRSF4-206ENST00000605204 FSHRP23945 695 aa20.66■□□□□ 0.9
SRSF4-206ENST00000605204 PPP1R2P41236 205 aa20.66■□□□□ 0.9
SRSF4-206ENST00000605204 VCPP55072 806 aaKnown RBP20.66■□□□□ 0.9
SRSF4-206ENST00000605204 CLDN10P78369 228 aa20.66■□□□□ 0.9
SRSF4-206ENST00000605204 BFSP1Q12934 665 aa20.66■□□□□ 0.9
SRSF4-206ENST00000605204 PNOCQ13519 176 aa20.66■□□□□ 0.9
SRSF4-206ENST00000605204 MTMR3Q13615 1198 aa20.66■□□□□ 0.9
SRSF4-206ENST00000605204 EDRF1Q3B7T1 1238 aa20.66■□□□□ 0.9
SRSF4-206ENST00000605204 ZNF658Q5TYW1 1059 aaPredicted RBP20.66■□□□□ 0.9
SRSF4-206ENST00000605204 TRAPPC11Q7Z392 1133 aa20.66■□□□□ 0.9
SRSF4-206ENST00000605204 BMP8AQ7Z5Y6 402 aa20.66■□□□□ 0.9
SRSF4-206ENST00000605204 GRASPQ7Z6J2 395 aaPredicted RBP20.66■□□□□ 0.9
SRSF4-206ENST00000605204 ASIC4Q96FT7 647 aa20.66■□□□□ 0.9
SRSF4-206ENST00000605204 HPDLQ96IR7 371 aa20.66■□□□□ 0.9
SRSF4-206ENST00000605204 IGSF9Q9P2J2 1179 aa20.66■□□□□ 0.9
SRSF4-206ENST00000605204 POLIQ9UNA4 740 aa20.66■□□□□ 0.9
SRSF4-206ENST00000605204 SORCS3Q9UPU3 1222 aa20.66■□□□□ 0.9
SRSF4-206ENST00000605204 CACNA1HO95180 2353 aa20.66■□□□□ 0.9
SRSF4-206ENST00000605204 PTPRJQ12913 1337 aa20.66■□□□□ 0.9
SRSF4-206ENST00000605204 STAU1O95793 577 aaKnown RBP20.65■□□□□ 0.9
SRSF4-206ENST00000605204 GBP2P32456 591 aaPredicted RBP20.65■□□□□ 0.9
SRSF4-206ENST00000605204 LHX1P48742 406 aa20.65■□□□□ 0.9
SRSF4-206ENST00000605204 UBE2HP62256 183 aa20.65■□□□□ 0.9
SRSF4-206ENST00000605204 TSPY1Q01534 308 aa20.65■□□□□ 0.9
SRSF4-206ENST00000605204 PABPC1LQ4VXU2 614 aaKnown RBP20.65■□□□□ 0.9
SRSF4-206ENST00000605204 WSCD1Q658N2 575 aa20.65■□□□□ 0.9
SRSF4-206ENST00000605204 IQCEQ6IPM2 695 aa20.65■□□□□ 0.9
SRSF4-206ENST00000605204 RNF19BQ6ZMZ0 732 aa20.65■□□□□ 0.9
SRSF4-206ENST00000605204 DCP1BQ8IZD4 617 aaKnown RBP20.65■□□□□ 0.9
SRSF4-206ENST00000605204 TMC2Q8TDI7 906 aa20.65■□□□□ 0.9
SRSF4-206ENST00000605204 PBXIP1Q96AQ6 731 aa20.65■□□□□ 0.9
SRSF4-206ENST00000605204 ZCWPW1Q9H0M4 648 aa20.65■□□□□ 0.9
SRSF4-206ENST00000605204 SNX9Q9Y5X1 595 aa20.65■□□□□ 0.9
SRSF4-206ENST00000605204 FAM163BP0C2L3 166 aa20.64■□□□□ 0.89
SRSF4-206ENST00000605204 PTPN2P17706 415 aa20.64■□□□□ 0.89
SRSF4-206ENST00000605204 NR2F2P24468 414 aa20.64■□□□□ 0.89
SRSF4-206ENST00000605204 PCSK1P29120 753 aa20.64■□□□□ 0.89
SRSF4-206ENST00000605204 ATICP31939 592 aa20.64■□□□□ 0.89
SRSF4-206ENST00000605204 MYL7Q01449 175 aa20.64■□□□□ 0.89
SRSF4-206ENST00000605204 TCF15Q12870 199 aa20.64■□□□□ 0.89
SRSF4-206ENST00000605204 LMBRD2Q68DH5 695 aaPredicted RBP20.64■□□□□ 0.89
SRSF4-206ENST00000605204 GET4Q7L5D6 327 aaPredicted RBP20.64■□□□□ 0.89
SRSF4-206ENST00000605204 PDCL2Q8N4E4 241 aa20.64■□□□□ 0.89
SRSF4-206ENST00000605204 PARD3BQ8TEW8 1205 aa20.64■□□□□ 0.89
SRSF4-206ENST00000605204 SYAP1Q96A49 352 aaPredicted RBP20.64■□□□□ 0.89
SRSF4-206ENST00000605204 ACBD6Q9BR61 282 aa20.64■□□□□ 0.89
SRSF4-206ENST00000605204 CDH7Q9ULB5 785 aa20.64■□□□□ 0.89
SRSF4-206ENST00000605204 MTCL1Q9Y4B5 1905 aaKnown RBP20.64■□□□□ 0.89
SRSF4-206ENST00000605204 MTMR11A4FU01 709 aa20.63■□□□□ 0.89
SRSF4-206ENST00000605204 ZNF197O14709 1029 aa20.63■□□□□ 0.89
SRSF4-206ENST00000605204 IKBKBO14920 756 aa20.63■□□□□ 0.89
SRSF4-206ENST00000605204 MICAL2O94851 1124 aa20.63■□□□□ 0.89
SRSF4-206ENST00000605204 SEC24AO95486 1093 aa20.63■□□□□ 0.89
SRSF4-206ENST00000605204 ALDH1A3P47895 512 aa20.63■□□□□ 0.89
SRSF4-206ENST00000605204 TUFMP49411 452 aaKnown RBP20.63■□□□□ 0.89
SRSF4-206ENST00000605204 TRPC3Q13507 836 aa20.63■□□□□ 0.89
SRSF4-206ENST00000605204 STIM1Q13586 685 aa20.63■□□□□ 0.89
SRSF4-206ENST00000605204 NFE2Q16621 373 aaPredicted RBP20.63■□□□□ 0.89
SRSF4-206ENST00000605204 ZCWPW2Q504Y3 356 aa20.63■□□□□ 0.89
SRSF4-206ENST00000605204 CEP135Q66GS9 1140 aa20.63■□□□□ 0.89
SRSF4-206ENST00000605204 CENPPQ6IPU0 288 aa20.63■□□□□ 0.89
SRSF4-206ENST00000605204 INTS8Q75QN2 995 aaKnown RBP20.63■□□□□ 0.89
SRSF4-206ENST00000605204 ADGRF2Q8IZF7 708 aa20.63■□□□□ 0.89
SRSF4-206ENST00000605204 OR10T2Q8NGX3 314 aa20.63■□□□□ 0.89
SRSF4-206ENST00000605204 FEZF2Q8TBJ5 459 aa20.63■□□□□ 0.89
SRSF4-206ENST00000605204 SPPL2BQ8TCT7 592 aa20.63■□□□□ 0.89
SRSF4-206ENST00000605204 ZNF512Q96ME7 567 aaPredicted RBP20.63■□□□□ 0.89
SRSF4-206ENST00000605204 L1RE1Q9UN81 338 aa20.63■□□□□ 0.89
SRSF4-206ENST00000605204 YIPF1Q9Y548 306 aa20.63■□□□□ 0.89
SRSF4-206ENST00000605204 ASB3Q9Y575 518 aa20.63■□□□□ 0.89
SRSF4-206ENST00000605204 PCDHA5Q9Y5H7 936 aa20.63■□□□□ 0.89
SRSF4-206ENST00000605204 VPS13AQ96RL7 3174 aa20.63■□□□□ 0.89
SRSF4-206ENST00000605204 PDGFBP01127 241 aaPredicted RBP20.62■□□□□ 0.89
SRSF4-206ENST00000605204 EPHB3P54753 998 aa20.62■□□□□ 0.89
SRSF4-206ENST00000605204 SIGLEC14Q08ET2 396 aa20.62■□□□□ 0.89
SRSF4-206ENST00000605204 LIMS2Q7Z4I7 341 aa20.62■□□□□ 0.89
SRSF4-206ENST00000605204 FBXL6Q8N531 539 aa20.62■□□□□ 0.89
SRSF4-206ENST00000605204 TSG101Q99816 390 aa20.62■□□□□ 0.89
SRSF4-206ENST00000605204 MKNK1Q9BUB5 465 aa20.62■□□□□ 0.89
SRSF4-206ENST00000605204 VRTNQ9H8Y1 702 aa20.62■□□□□ 0.89
SRSF4-206ENST00000605204 LIMD1Q9UGP4 676 aa20.62■□□□□ 0.89
SRSF4-206ENST00000605204 MAPK8IP1Q9UQF2 711 aa20.62■□□□□ 0.89
SRSF4-206ENST00000605204 GABRDO14764 452 aa20.61■□□□□ 0.89
SRSF4-206ENST00000605204 PHACTR2O75167 634 aa20.61■□□□□ 0.89
SRSF4-206ENST00000605204 RHOP08100 348 aa20.61■□□□□ 0.89
SRSF4-206ENST00000605204 OR4Q2P0C623 313 aa20.61■□□□□ 0.89
SRSF4-206ENST00000605204 LAMP2P13473 410 aa20.61■□□□□ 0.89
SRSF4-206ENST00000605204 KRT13P13646 458 aa20.61■□□□□ 0.89
SRSF4-206ENST00000605204 PSMC2P35998 433 aaKnown RBP20.61■□□□□ 0.89
SRSF4-206ENST00000605204 TWF1Q12792 350 aa20.61■□□□□ 0.89
SRSF4-206ENST00000605204 DUSP4Q13115 394 aa20.61■□□□□ 0.89
SRSF4-206ENST00000605204 SLC39A12Q504Y0 691 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms