RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 ZCWPW1Q9H0M4 648 aa24.74■■□□□ 1.55
CCDC61-207ENST00000599044 PCIF1Q9H4Z3 704 aa24.74■■□□□ 1.55
CCDC61-207ENST00000599044 TSC2P49815 1807 aa24.74■■□□□ 1.55
CCDC61-207ENST00000599044 SCN1AP35498 2009 aa24.73■■□□□ 1.55
CCDC61-207ENST00000599044 IL18RAPO95256 599 aa24.73■■□□□ 1.55
CCDC61-207ENST00000599044 PAX3P23760 479 aa24.73■■□□□ 1.55
CCDC61-207ENST00000599044 ALDH1A3P47895 512 aa24.73■■□□□ 1.55
CCDC61-207ENST00000599044 EPHB3P54753 998 aa24.73■■□□□ 1.55
CCDC61-207ENST00000599044 DNAJB7Q7Z6W7 309 aaPredicted RBP24.73■■□□□ 1.55
CCDC61-207ENST00000599044 SYCP3Q8IZU3 236 aa24.73■■□□□ 1.55
CCDC61-207ENST00000599044 LEMD2Q8NC56 503 aa24.73■■□□□ 1.55
CCDC61-207ENST00000599044 NKD2Q969F2 451 aaPredicted RBP24.73■■□□□ 1.55
CCDC61-207ENST00000599044 LTB4R2Q9NPC1 389 aa24.73■■□□□ 1.55
CCDC61-207ENST00000599044 R4GN57 208 aa24.73■■□□□ 1.55
CCDC61-207ENST00000599044 PATJQ8NI35 1801 aa24.72■■□□□ 1.55
CCDC61-207ENST00000599044 TFAMQ00059 246 aaKnown RBP24.72■■□□□ 1.55
CCDC61-207ENST00000599044 FOXD4L6Q3SYB3 417 aaPredicted RBP24.72■■□□□ 1.55
CCDC61-207ENST00000599044 SHC4Q6S5L8 630 aa24.72■■□□□ 1.55
CCDC61-207ENST00000599044 FOXD4L3Q6VB84 417 aaPredicted RBP24.72■■□□□ 1.55
CCDC61-207ENST00000599044 BRSK2Q8IWQ3 736 aa24.72■■□□□ 1.55
CCDC61-207ENST00000599044 CXorf38Q8TB03 319 aa24.72■■□□□ 1.55
CCDC61-207ENST00000599044 LPIN3Q9BQK8 851 aa24.72■■□□□ 1.55
CCDC61-207ENST00000599044 TRMT61BQ9BVS5 477 aaKnown RBP24.72■■□□□ 1.55
CCDC61-207ENST00000599044 OTOGLQ3ZCN5 2332 aa24.71■■□□□ 1.55
CCDC61-207ENST00000599044 KPNA7A9QM74 516 aa24.71■■□□□ 1.55
CCDC61-207ENST00000599044 PPP6R2O75170 966 aa24.71■■□□□ 1.55
CCDC61-207ENST00000599044 SP9P0CG40 484 aa24.71■■□□□ 1.55
CCDC61-207ENST00000599044 GARTP22102 1010 aa24.71■■□□□ 1.55
CCDC61-207ENST00000599044 TARSP26639 723 aaKnown RBP24.71■■□□□ 1.55
CCDC61-207ENST00000599044 HOXD13P35453 343 aa24.71■■□□□ 1.55
CCDC61-207ENST00000599044 PLD1Q13393 1074 aa24.71■■□□□ 1.55
CCDC61-207ENST00000599044 FZD5Q13467 585 aa24.71■■□□□ 1.55
CCDC61-207ENST00000599044 GAREM2Q75VX8 874 aa24.71■■□□□ 1.55
CCDC61-207ENST00000599044 C1orf127Q8N9H9 656 aa24.71■■□□□ 1.55
CCDC61-207ENST00000599044 MKNK1Q9BUB5 465 aa24.71■■□□□ 1.55
CCDC61-207ENST00000599044 BRD9Q9H8M2 597 aa24.71■■□□□ 1.55
CCDC61-207ENST00000599044 TRPV4Q9HBA0 871 aa24.71■■□□□ 1.55
CCDC61-207ENST00000599044 KBTBD4Q9NVX7 518 aa24.71■■□□□ 1.55
CCDC61-207ENST00000599044 RBAKQ9NYW8 714 aaPredicted RBP24.71■■□□□ 1.55
CCDC61-207ENST00000599044 DSEQ9UL01 958 aa24.71■■□□□ 1.55
CCDC61-207ENST00000599044 ITGB3P05106 788 aa24.7■■□□□ 1.54
CCDC61-207ENST00000599044 ATF6P18850 670 aa24.7■■□□□ 1.54
CCDC61-207ENST00000599044 POLR2BP30876 1174 aaKnown RBP24.7■■□□□ 1.54
CCDC61-207ENST00000599044 GDI1P31150 447 aa24.7■■□□□ 1.54
CCDC61-207ENST00000599044 METTL23Q86XA0 190 aa24.7■■□□□ 1.54
CCDC61-207ENST00000599044 NT5DC4Q86YG4 428 aa24.7■■□□□ 1.54
CCDC61-207ENST00000599044 NOC3LQ8WTT2 800 aaKnown RBP24.7■■□□□ 1.54
CCDC61-207ENST00000599044 PSMG2Q969U7 264 aa24.7■■□□□ 1.54
CCDC61-207ENST00000599044 DHX58Q96C10 678 aa24.7■■□□□ 1.54
CCDC61-207ENST00000599044 ZNF396Q96N95 335 aaPredicted RBP24.7■■□□□ 1.54
CCDC61-207ENST00000599044 SEPT5Q99719 369 aaPredicted RBP24.7■■□□□ 1.54
CCDC61-207ENST00000599044 PDE11AQ9HCR9 933 aa24.7■■□□□ 1.54
CCDC61-207ENST00000599044 TMLHEQ9NVH6 421 aa24.7■■□□□ 1.54
CCDC61-207ENST00000599044 AGAP1Q9UPQ3 857 aa24.7■■□□□ 1.54
CCDC61-207ENST00000599044 HEPACAM2A8MVW5 462 aa24.69■■□□□ 1.54
CCDC61-207ENST00000599044 EXTL3O43909 919 aa24.69■■□□□ 1.54
CCDC61-207ENST00000599044 PSMC3P17980 439 aa24.69■■□□□ 1.54
CCDC61-207ENST00000599044 ALCAMQ13740 583 aa24.69■■□□□ 1.54
CCDC61-207ENST00000599044 SV2CQ496J9 727 aa24.69■■□□□ 1.54
CCDC61-207ENST00000599044 CCDC65Q8IXS2 484 aa24.69■■□□□ 1.54
CCDC61-207ENST00000599044 ZNF687Q8N1G0 1237 aa24.69■■□□□ 1.54
CCDC61-207ENST00000599044 DNASE1L2Q92874 299 aa24.69■■□□□ 1.54
CCDC61-207ENST00000599044 LRRC3BQ96PB8 259 aa24.69■■□□□ 1.54
CCDC61-207ENST00000599044 OSBPL6Q9BZF3 934 aa24.69■■□□□ 1.54
CCDC61-207ENST00000599044 TRIM9Q9C026 710 aa24.69■■□□□ 1.54
CCDC61-207ENST00000599044 TNMDQ9H2S6 317 aa24.69■■□□□ 1.54
CCDC61-207ENST00000599044 SLITRK6Q9H5Y7 841 aa24.69■■□□□ 1.54
CCDC61-207ENST00000599044 DCHS1Q96JQ0 3298 aa24.69■■□□□ 1.54
CCDC61-207ENST00000599044 CACNA1AO00555 2505 aa24.68■■□□□ 1.54
CCDC61-207ENST00000599044 YEATS4O95619 227 aa24.68■■□□□ 1.54
CCDC61-207ENST00000599044 LDHAP00338 332 aaKnown RBP24.68■■□□□ 1.54
CCDC61-207ENST00000599044 PKP1Q13835 747 aa24.68■■□□□ 1.54
CCDC61-207ENST00000599044 MGAT5BQ3V5L5 792 aa24.68■■□□□ 1.54
CCDC61-207ENST00000599044 ZNF852Q6ZMS4 543 aa24.68■■□□□ 1.54
CCDC61-207ENST00000599044 MFSD6LQ8IWD5 586 aa24.68■■□□□ 1.54
CCDC61-207ENST00000599044 THEM5Q8N1Q8 247 aa24.68■■□□□ 1.54
CCDC61-207ENST00000599044 GIPC2Q8TF65 315 aa24.68■■□□□ 1.54
CCDC61-207ENST00000599044 CLDN23Q96B33 292 aa24.68■■□□□ 1.54
CCDC61-207ENST00000599044 BCO2Q9BYV7 579 aa24.68■■□□□ 1.54
CCDC61-207ENST00000599044 TMEM206Q9H813 350 aa24.68■■□□□ 1.54
CCDC61-207ENST00000599044 SPATA6Q9NWH7 488 aaPredicted RBP24.68■■□□□ 1.54
CCDC61-207ENST00000599044 HSFX1Q9UBD0 423 aa24.68■■□□□ 1.54
CCDC61-207ENST00000599044 SIX4Q9UIU6 781 aa24.68■■□□□ 1.54
CCDC61-207ENST00000599044 ASB3Q9Y575 518 aa24.68■■□□□ 1.54
CCDC61-207ENST00000599044 PTPRJQ12913 1337 aa24.67■■□□□ 1.54
CCDC61-207ENST00000599044 COL4A2P08572 1712 aa24.67■■□□□ 1.54
CCDC61-207ENST00000599044 ARNTLO00327 626 aa24.67■■□□□ 1.54
CCDC61-207ENST00000599044 CUTAO60888 179 aa24.67■■□□□ 1.54
CCDC61-207ENST00000599044 GABRR2P28476 465 aa24.67■■□□□ 1.54
CCDC61-207ENST00000599044 CASP1P29466 404 aa24.67■■□□□ 1.54
CCDC61-207ENST00000599044 LMBRD2Q68DH5 695 aaPredicted RBP24.67■■□□□ 1.54
CCDC61-207ENST00000599044 ARID3BQ8IVW6 561 aaPredicted RBP24.67■■□□□ 1.54
CCDC61-207ENST00000599044 ADSSL1Q8N142 457 aa24.67■■□□□ 1.54
CCDC61-207ENST00000599044 PDCL2Q8N4E4 241 aa24.67■■□□□ 1.54
CCDC61-207ENST00000599044 CSGALNACT2Q8N6G5 542 aa24.67■■□□□ 1.54
CCDC61-207ENST00000599044 GPR88Q9GZN0 384 aa24.67■■□□□ 1.54
CCDC61-207ENST00000599044 ATXN3LQ9H3M9 355 aa24.67■■□□□ 1.54
CCDC61-207ENST00000599044 IL21Q9HBE4 155 aa24.67■■□□□ 1.54
CCDC61-207ENST00000599044 L1RE1Q9UN81 338 aa24.67■■□□□ 1.54
CCDC61-207ENST00000599044 FRYLO94915 3013 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms