RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-205	ENST00000595081	MSLNL	Q96KJ4	702 aa		24.56	■■□□□ 1.52
PNKP-205	ENST00000595081	TMEM209	Q96SK2	561 aa		24.56	■■□□□ 1.52
PNKP-205	ENST00000595081	APOL5	Q9BWW9	433 aa		24.56	■■□□□ 1.52
PNKP-205	ENST00000595081	VRTN	Q9H8Y1	702 aa		24.56	■■□□□ 1.52
PNKP-205	ENST00000595081	WDR27	A2RRH5	827 aa		24.55	■■□□□ 1.52
PNKP-205	ENST00000595081	OR6C75	A6NL08	312 aa		24.55	■■□□□ 1.52
PNKP-205	ENST00000595081	ASS1	P00966	412 aa	Known RBP	24.55	■■□□□ 1.52
PNKP-205	ENST00000595081	CPB1	P15086	417 aa		24.55	■■□□□ 1.52
PNKP-205	ENST00000595081	ZNF667	Q5HYK9	610 aa		24.55	■■□□□ 1.52
PNKP-205	ENST00000595081	SCARA5	Q6ZMJ2	495 aa		24.55	■■□□□ 1.52
PNKP-205	ENST00000595081	LIMS2	Q7Z4I7	341 aa		24.55	■■□□□ 1.52
PNKP-205	ENST00000595081	C12orf76	Q8N812	135 aa	Predicted RBP	24.55	■■□□□ 1.52
PNKP-205	ENST00000595081	KBTBD7	Q8WVZ9	684 aa		24.55	■■□□□ 1.52
PNKP-205	ENST00000595081	THAP9	Q9H5L6	903 aa		24.55	■■□□□ 1.52
PNKP-205	ENST00000595081	HCRT	O43612	131 aa		24.54	■■□□□ 1.52
PNKP-205	ENST00000595081	LETM1	O95202	739 aa	Predicted RBP	24.54	■■□□□ 1.52
PNKP-205	ENST00000595081	FMO5	P49326	533 aa		24.54	■■□□□ 1.52
PNKP-205	ENST00000595081	ANO6	Q4KMQ2	910 aa		24.54	■■□□□ 1.52
PNKP-205	ENST00000595081	SYCE2	Q6PIF2	218 aa		24.54	■■□□□ 1.52
PNKP-205	ENST00000595081	THEM5	Q8N1Q8	247 aa		24.54	■■□□□ 1.52
PNKP-205	ENST00000595081	TMEM86A	Q8N2M4	240 aa		24.54	■■□□□ 1.52
PNKP-205	ENST00000595081	KREMEN2	Q8NCW0	462 aa		24.54	■■□□□ 1.52
PNKP-205	ENST00000595081	FBXL13	Q8NEE6	735 aa		24.54	■■□□□ 1.52
PNKP-205	ENST00000595081	ENOX1	Q8TC92	643 aa	Known RBP	24.54	■■□□□ 1.52
PNKP-205	ENST00000595081	MRPL45	Q9BRJ2	306 aa	Known RBP	24.54	■■□□□ 1.52
PNKP-205	ENST00000595081	SMYD3	Q9H7B4	428 aa		24.54	■■□□□ 1.52
PNKP-205	ENST00000595081	SAMSN1	Q9NSI8	373 aa	Known RBP	24.54	■■□□□ 1.52
PNKP-205	ENST00000595081	DZANK1	Q9NVP4	752 aa		24.54	■■□□□ 1.52
PNKP-205	ENST00000595081	DDX43	Q9NXZ2	648 aa	Known RBP	24.54	■■□□□ 1.52
PNKP-205	ENST00000595081	FBXW11	Q9UKB1	542 aa		24.54	■■□□□ 1.52
PNKP-205	ENST00000595081	NFE2L3	Q9Y4A8	694 aa		24.54	■■□□□ 1.52
PNKP-205	ENST00000595081	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	24.54	■■□□□ 1.52
PNKP-205	ENST00000595081	SPDYE4	A6NLX3	237 aa		24.53	■■□□□ 1.52
PNKP-205	ENST00000595081	RAP1GAP	P47736	663 aa		24.53	■■□□□ 1.52
PNKP-205	ENST00000595081	CDR1	P51861	262 aa		24.53	■■□□□ 1.52
PNKP-205	ENST00000595081	MYL7	Q01449	175 aa		24.53	■■□□□ 1.52
PNKP-205	ENST00000595081	DPH6	Q7L8W6	267 aa		24.53	■■□□□ 1.52
PNKP-205	ENST00000595081	ZNF461	Q8TAF7	563 aa		24.53	■■□□□ 1.52
PNKP-205	ENST00000595081	FEZF2	Q8TBJ5	459 aa		24.53	■■□□□ 1.52
PNKP-205	ENST00000595081	TAF4B	Q92750	862 aa		24.53	■■□□□ 1.52
PNKP-205	ENST00000595081	FUCA2	Q9BTY2	467 aa		24.53	■■□□□ 1.52
PNKP-205	ENST00000595081	OXCT2	Q9BYC2	517 aa	Predicted RBP	24.53	■■□□□ 1.52
PNKP-205	ENST00000595081	IMPG2	Q9BZV3	1241 aa		24.53	■■□□□ 1.52
PNKP-205	ENST00000595081	APOBEC3G	Q9HC16	384 aa	Known RBP	24.53	■■□□□ 1.52
PNKP-205	ENST00000595081	RAB20	Q9NX57	234 aa		24.53	■■□□□ 1.52
PNKP-205	ENST00000595081	CD207	Q9UJ71	328 aa		24.53	■■□□□ 1.52
PNKP-205	ENST00000595081	UNC80	Q8N2C7	3258 aa		24.52	■■□□□ 1.52
PNKP-205	ENST00000595081	GABRD	O14764	452 aa		24.52	■■□□□ 1.52
PNKP-205	ENST00000595081	ABLIM3	O94929	683 aa		24.52	■■□□□ 1.52
PNKP-205	ENST00000595081	C1R	P00736	705 aa		24.52	■■□□□ 1.52
PNKP-205	ENST00000595081	ACAT1	P24752	427 aa	Known RBP	24.52	■■□□□ 1.52
PNKP-205	ENST00000595081	NOP14	P78316	857 aa	Known RBP	24.52	■■□□□ 1.52
PNKP-205	ENST00000595081	KCNH2	Q12809	1159 aa		24.52	■■□□□ 1.52
PNKP-205	ENST00000595081	ZSCAN23	Q3MJ62	389 aa		24.52	■■□□□ 1.52
PNKP-205	ENST00000595081	RNF19B	Q6ZMZ0	732 aa		24.52	■■□□□ 1.52
PNKP-205	ENST00000595081	PGLYRP2	Q96PD5	576 aa		24.52	■■□□□ 1.52
PNKP-205	ENST00000595081	SDCBP2	Q9H190	292 aa		24.52	■■□□□ 1.52
PNKP-205	ENST00000595081	RFPL2	O75678	378 aa		24.51	■■□□□ 1.51
PNKP-205	ENST00000595081	AFP	P02771	609 aa	Known RBP	24.51	■■□□□ 1.51
PNKP-205	ENST00000595081	HOXB8	P17481	243 aa	Predicted RBP	24.51	■■□□□ 1.51
PNKP-205	ENST00000595081	WARS	P23381	471 aa	Known RBP	24.51	■■□□□ 1.51
PNKP-205	ENST00000595081	MTIF2	P46199	727 aa	Known RBP	24.51	■■□□□ 1.51
PNKP-205	ENST00000595081	LHX1	P48742	406 aa		24.51	■■□□□ 1.51
PNKP-205	ENST00000595081	CDH8	P55286	799 aa		24.51	■■□□□ 1.51
PNKP-205	ENST00000595081	LEXM	Q3ZCV2	418 aa		24.51	■■□□□ 1.51
PNKP-205	ENST00000595081	RARS2	Q5T160	578 aa	Known RBP	24.51	■■□□□ 1.51
PNKP-205	ENST00000595081	FAM114A1	Q8IWE2	563 aa		24.51	■■□□□ 1.51
PNKP-205	ENST00000595081	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	24.51	■■□□□ 1.51
PNKP-205	ENST00000595081	SPATA18	Q8TC71	538 aa		24.51	■■□□□ 1.51
PNKP-205	ENST00000595081	ZCWPW1	Q9H0M4	648 aa		24.51	■■□□□ 1.51
PNKP-205	ENST00000595081	PLEKHA4	Q9H4M7	779 aa		24.51	■■□□□ 1.51
PNKP-205	ENST00000595081	MAGEC2	Q9UBF1	373 aa	Predicted RBP	24.51	■■□□□ 1.51
PNKP-205	ENST00000595081	CDH22	Q9UJ99	828 aa		24.51	■■□□□ 1.51
PNKP-205	ENST00000595081	COQ4	Q9Y3A0	265 aa		24.51	■■□□□ 1.51
PNKP-205	ENST00000595081	NME7	Q9Y5B8	376 aa		24.51	■■□□□ 1.51
PNKP-205	ENST00000595081	N4BP1	O75113	896 aa	Known RBP	24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	TACC1	O75410	805 aa		24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	VNN2	O95498	520 aa		24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	P4HA1	P13674	534 aa		24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	LMO2	P25791	158 aa		24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	ASPA	P45381	313 aa		24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	KCNQ1	P51787	676 aa		24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	ADCY1	Q08828	1119 aa		24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	GPR17	Q13304	367 aa		24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	CCDC142	Q17RM4	750 aa		24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	SLC39A12	Q504Y0	691 aa		24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	LIN9	Q5TKA1	542 aa		24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	TPGS2	Q68CL5	300 aa		24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	TMC5	Q6UXY8	1006 aa		24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	LRRTM3	Q86VH5	581 aa		24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	SMRP1	Q8NCR6	262 aa		24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	CCDC150	Q8NCX0	1101 aa		24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	SLC7A14	Q8TBB6	771 aa		24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	HDAC7	Q8WUI4	952 aa		24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	S1PR5	Q9H228	398 aa		24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	SNX25	Q9H3E2	840 aa		24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	SFXN1	Q9H9B4	322 aa		24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	AFF4	Q9UHB7	1163 aa	Known RBP	24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	DPP7	Q9UHL4	492 aa		24.5	■■□□□ 1.51
PNKP-205	ENST00000595081	KCNJ18	B7U540	433 aa		24.49	■■□□□ 1.51

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms