RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 DEPDC1BQ8WUY9 529 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 MSANTD3Q96H12 275 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 CDT1Q9H211 546 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 TRPV5Q9NQA5 729 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 CYLDQ9NQC7 956 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 ASAH2Q9NR71 780 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 KCND2Q9NZV8 630 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 CNTN3Q9P232 1028 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 AFF4Q9UHB7 1163 aaKnown RBP10.28□□□□□ -0.76
BRCA1-226ENST00000591534 GMEB2Q9UKD1 530 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 SMC3Q9UQE7 1217 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 USP20Q9Y2K6 914 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 INSL5Q9Y5Q6 135 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 WDR87Q6ZQQ6 2873 aa10.28□□□□□ -0.76
BRCA1-226ENST00000591534 SPTBN4Q9H254 2564 aa10.27□□□□□ -0.76
BRCA1-226ENST00000591534 TDRD15B5MCY1 1934 aaKnown RBP10.27□□□□□ -0.76
BRCA1-226ENST00000591534 WDR27A2RRH5 827 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 I3L4J1 428 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 CLDN3O15551 220 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 LRRN2O75325 713 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 FGF19O95750 216 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 CPB1P15086 417 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 PSMC3P17980 439 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 PAX3P23760 479 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 PRPHP41219 470 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 MATR3P43243 847 aaKnown RBP eCLIP10.27□□□□□ -0.77
BRCA1-226ENST00000591534 LMNB2Q03252 620 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 TANGO2Q6ICL3 276 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 USP37Q86T82 979 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 YAF2Q8IY57 180 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 MAML2Q8IZL2 1156 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-226ENST00000591534 IGSF22Q8N9C0 903 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 ZBTB44Q8NCP5 570 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 SMARCD2Q92925 531 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 SUSD3Q96L08 255 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 TSPAN18Q96SJ8 248 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 NTPCRQ9BSD7 190 aaKnown RBP10.27□□□□□ -0.77
BRCA1-226ENST00000591534 TARS2Q9BW92 718 aaKnown RBP10.27□□□□□ -0.77
BRCA1-226ENST00000591534 CXCL16Q9H2A7 254 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 EPC1Q9H2F5 836 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 PLEKHA5Q9HAU0 1116 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 GOLGA2P5Q9HBQ8 144 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 PTPRHQ9HD43 1115 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 HEBP1Q9NRV9 189 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 DLL3Q9NYJ7 618 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 ARHGAP28Q9P2N2 729 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 FBXL5Q9UKA1 691 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 MTF2Q9Y483 593 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-226ENST00000591534 GVINP1Q7Z2Y8 2422 aa10.27□□□□□ -0.77
BRCA1-226ENST00000591534 ZNF292O60281 2723 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 ZNF263O14978 683 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 EDN1P05305 212 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 HARSP12081 509 aaKnown RBP10.26□□□□□ -0.77
BRCA1-226ENST00000591534 CEBPBP17676 345 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 CD72P21854 359 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 PROZP22891 400 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 GUCY2CP25092 1073 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 U2AF2P26368 475 aaKnown RBP eCLIP10.26□□□□□ -0.771e-6■■■□□ 19.1
BRCA1-226ENST00000591534 TARSP26639 723 aaKnown RBP10.26□□□□□ -0.77
BRCA1-226ENST00000591534 ABCD1P33897 745 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 ALDH1A3P47895 512 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 CCR3P51677 355 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 EPHB3P54753 998 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 MLLT6P55198 1093 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-226ENST00000591534 SEC13P55735 322 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 YWHAHQ04917 246 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-226ENST00000591534 MRPL58Q14197 206 aaKnown RBP10.26□□□□□ -0.77
BRCA1-226ENST00000591534 NOLC1Q14978 699 aaKnown RBP eCLIP10.26□□□□□ -0.77
BRCA1-226ENST00000591534 SLC5A9Q2M3M2 681 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 FAM78AQ5JUQ0 283 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 PRSS36Q5K4E3 855 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 RINT1Q6NUQ1 792 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 CD300LGQ6UXG3 332 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 ZPBP2Q6X784 338 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 CELF5Q8N6W0 485 aaKnown RBP10.26□□□□□ -0.77
BRCA1-226ENST00000591534 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.26□□□□□ -0.77
BRCA1-226ENST00000591534 C3orf58Q8NDZ4 430 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 CSGALNACT1Q8TDX6 532 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 FAM3CQ92520 227 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 CDK5RAP3Q96JB5 506 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 ASB16Q96NS5 453 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 GBP4Q96PP9 640 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 ANP32EQ9BTT0 268 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 SLITRK6Q9H5Y7 841 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 POLD4Q9HCU8 107 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 LARSQ9P2J5 1176 aaKnown RBP10.26□□□□□ -0.77
BRCA1-226ENST00000591534 ANKFY1Q9P2R3 1169 aa10.26□□□□□ -0.77
BRCA1-226ENST00000591534 SMG5Q9UPR3 1016 aaKnown RBP10.26□□□□□ -0.77
BRCA1-226ENST00000591534 FRYLO94915 3013 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 OR6C75A6NL08 312 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 E9PMD0 336 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 SLC16A4O15374 487 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 FOXD2O60548 495 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-226ENST00000591534 PRMT3O60678 531 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 CLTAP09496 248 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 MYL4P12829 197 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 PLS3P13797 630 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 CYP3A5P20815 502 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 GDI1P31150 447 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 TOB1P50616 345 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms