RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 HIP1RO75146 1068 aa18.85■□□□□ 0.61
RETREG3-210ENST00000590541 SOAT2O75908 522 aa18.85■□□□□ 0.61
RETREG3-210ENST00000590541 LRPAP1P30533 357 aa18.85■□□□□ 0.61
RETREG3-210ENST00000590541 DMP1Q13316 513 aaPredicted RBP18.85■□□□□ 0.61
RETREG3-210ENST00000590541 ZNF174Q15697 407 aa18.85■□□□□ 0.61
RETREG3-210ENST00000590541 PLK5Q496M5 336 aa18.85■□□□□ 0.61
RETREG3-210ENST00000590541 TMEM196Q5HYL7 178 aa18.85■□□□□ 0.61
RETREG3-210ENST00000590541 KDF1Q8NAX2 398 aaPredicted RBP18.85■□□□□ 0.61
RETREG3-210ENST00000590541 TMEM121BQ9BXQ6 578 aaPredicted RBP18.85■□□□□ 0.61
RETREG3-210ENST00000590541 KMT5AQ9NQR1 393 aa18.85■□□□□ 0.61
RETREG3-210ENST00000590541 SLC8A2Q9UPR5 921 aa18.85■□□□□ 0.61
RETREG3-210ENST00000590541 KIAA1024Q9UPX6 916 aa18.85■□□□□ 0.61
RETREG3-210ENST00000590541 WASF3Q9UPY6 502 aa18.85■□□□□ 0.61
RETREG3-210ENST00000590541 ASPMQ8IZT6 3477 aa18.84■□□□□ 0.61
RETREG3-210ENST00000590541 ATG13O75143 517 aa18.84■□□□□ 0.61
RETREG3-210ENST00000590541 FGF19O95750 216 aa18.84■□□□□ 0.61
RETREG3-210ENST00000590541 NOVA1P51513 510 aaKnown RBP18.84■□□□□ 0.61
RETREG3-210ENST00000590541 CYP4F8P98187 520 aa18.84■□□□□ 0.61
RETREG3-210ENST00000590541 SPAG1Q07617 926 aa18.84■□□□□ 0.61
RETREG3-210ENST00000590541 MAPK7Q13164 816 aa18.84■□□□□ 0.61
RETREG3-210ENST00000590541 ARHGAP15Q53QZ3 475 aa18.84■□□□□ 0.61
RETREG3-210ENST00000590541 SMG9Q9H0W8 520 aaKnown RBP18.84■□□□□ 0.61
RETREG3-210ENST00000590541 DUSP15Q9H1R2 295 aaPredicted RBP18.84■□□□□ 0.61
RETREG3-210ENST00000590541 TASP1Q9H6P5 420 aa18.84■□□□□ 0.61
RETREG3-210ENST00000590541 DDX19AQ9NUU7 478 aaKnown RBP18.84■□□□□ 0.61
RETREG3-210ENST00000590541 RBM19Q9Y4C8 960 aaKnown RBP18.84■□□□□ 0.61
RETREG3-210ENST00000590541 OTOL1A6NHN0 477 aaPredicted RBP18.83■□□□□ 0.6
RETREG3-210ENST00000590541 LAD1O00515 517 aa18.83■□□□□ 0.6
RETREG3-210ENST00000590541 TRDMT1O14717 391 aaKnown RBP18.83■□□□□ 0.6
RETREG3-210ENST00000590541 CXCL8P10145 99 aa18.83■□□□□ 0.6
RETREG3-210ENST00000590541 MYBPC2Q14324 1141 aa18.83■□□□□ 0.6
RETREG3-210ENST00000590541 PDIA5Q14554 519 aa18.83■□□□□ 0.6
RETREG3-210ENST00000590541 NOLC1Q14978 699 aaKnown RBP eCLIP18.83■□□□□ 0.6
RETREG3-210ENST00000590541 ZBTB6Q15916 424 aa18.83■□□□□ 0.6
RETREG3-210ENST00000590541 USP37Q86T82 979 aa18.83■□□□□ 0.6
RETREG3-210ENST00000590541 CAMKK1Q8N5S9 505 aa18.83■□□□□ 0.6
RETREG3-210ENST00000590541 LPIN3Q9BQK8 851 aa18.83■□□□□ 0.6
RETREG3-210ENST00000590541 FAM83CQ9BQN1 747 aa18.83■□□□□ 0.6
RETREG3-210ENST00000590541 EDEM2Q9BV94 578 aa18.83■□□□□ 0.6
RETREG3-210ENST00000590541 RAB34Q9BZG1 259 aa18.83■□□□□ 0.6
RETREG3-210ENST00000590541 IL21Q9HBE4 155 aa18.83■□□□□ 0.6
RETREG3-210ENST00000590541 HPS4Q9NQG7 708 aa18.83■□□□□ 0.6
RETREG3-210ENST00000590541 GKN1Q9NS71 199 aa18.83■□□□□ 0.6
RETREG3-210ENST00000590541 ANKFY1Q9P2R3 1169 aa18.83■□□□□ 0.6
RETREG3-210ENST00000590541 ATRXP46100 2492 aa18.83■□□□□ 0.6
RETREG3-210ENST00000590541 SPEGQ15772 3267 aa18.83■□□□□ 0.6
RETREG3-210ENST00000590541 C4orf47A7E2U8 309 aa18.82■□□□□ 0.6
RETREG3-210ENST00000590541 E9PMD0 336 aa18.82■□□□□ 0.6
RETREG3-210ENST00000590541 SLC16A4O15374 487 aa18.82■□□□□ 0.6
RETREG3-210ENST00000590541 RNF40O75150 1001 aa18.82■□□□□ 0.6
RETREG3-210ENST00000590541 TOM1L1O75674 476 aa18.82■□□□□ 0.6
RETREG3-210ENST00000590541 SPINK2P20155 84 aa18.82■□□□□ 0.6
RETREG3-210ENST00000590541 FXR2P51116 673 aaKnown RBP eCLIP18.82■□□□□ 0.6
RETREG3-210ENST00000590541 GRSF1Q12849 480 aaKnown RBP eCLIP18.82■□□□□ 0.6
RETREG3-210ENST00000590541 FOXC1Q12948 553 aa18.82■□□□□ 0.6
RETREG3-210ENST00000590541 RUNX3Q13761 415 aa18.82■□□□□ 0.6
RETREG3-210ENST00000590541 PTPAQ15257 358 aa18.82■□□□□ 0.6
RETREG3-210ENST00000590541 OVOS1Q6IE37 1185 aa18.82■□□□□ 0.6
RETREG3-210ENST00000590541 ITIH5Q86UX2 942 aa18.82■□□□□ 0.6
RETREG3-210ENST00000590541 TMX3Q96JJ7 454 aa18.82■□□□□ 0.6
RETREG3-210ENST00000590541 RUSC1Q9BVN2 902 aa18.82■□□□□ 0.6
RETREG3-210ENST00000590541 SLC46A2Q9BY10 475 aa18.82■□□□□ 0.6
RETREG3-210ENST00000590541 HAPLN2Q9GZV7 340 aa18.82■□□□□ 0.6
RETREG3-210ENST00000590541 THG1LQ9NWX6 298 aaKnown RBP18.82■□□□□ 0.6
RETREG3-210ENST00000590541 LAMA1P25391 3075 aa18.82■□□□□ 0.6
RETREG3-210ENST00000590541 TTC26A0AVF1 554 aa18.81■□□□□ 0.6
RETREG3-210ENST00000590541 SFI1A8K8P3 1242 aa18.81■□□□□ 0.6
RETREG3-210ENST00000590541 DCLK1O15075 740 aa18.81■□□□□ 0.6
RETREG3-210ENST00000590541 ZZEF1O43149 2961 aa18.81■□□□□ 0.6
RETREG3-210ENST00000590541 EGFP01133 1207 aa18.81■□□□□ 0.6
RETREG3-210ENST00000590541 TYMPP19971 482 aa18.81■□□□□ 0.6
RETREG3-210ENST00000590541 CYP3A5P20815 502 aa18.81■□□□□ 0.6
RETREG3-210ENST00000590541 GUCY2FP51841 1108 aa18.81■□□□□ 0.6
RETREG3-210ENST00000590541 ZNF252P-AS1Q0IIN9 211 aa18.81■□□□□ 0.6
RETREG3-210ENST00000590541 TRIM68Q6AZZ1 485 aa18.81■□□□□ 0.6
RETREG3-210ENST00000590541 DSTYKQ6XUX3 929 aa18.81■□□□□ 0.6
RETREG3-210ENST00000590541 C4orf32Q8N8J7 132 aa18.81■□□□□ 0.6
RETREG3-210ENST00000590541 KIF12Q96FN5 646 aa18.81■□□□□ 0.6
RETREG3-210ENST00000590541 DRC1Q96MC2 740 aa18.81■□□□□ 0.6
RETREG3-210ENST00000590541 HHIPQ96QV1 700 aa18.81■□□□□ 0.6
RETREG3-210ENST00000590541 NTPCRQ9BSD7 190 aaKnown RBP18.81■□□□□ 0.6
RETREG3-210ENST00000590541 PLEKHA5Q9HAU0 1116 aa18.81■□□□□ 0.6
RETREG3-210ENST00000590541 FBRSL1Q9HCM7 1045 aaKnown RBP18.81■□□□□ 0.6
RETREG3-210ENST00000590541 HSFX1Q9UBD0 423 aa18.81■□□□□ 0.6
RETREG3-210ENST00000590541 LRWD1Q9UFC0 647 aa18.81■□□□□ 0.6
RETREG3-210ENST00000590541 UBQLN1Q9UMX0 589 aaKnown RBP18.81■□□□□ 0.6
RETREG3-210ENST00000590541 BCLAF3A2AJT9 711 aaKnown RBP18.8■□□□□ 0.6
RETREG3-210ENST00000590541 PPEF2O14830 753 aa18.8■□□□□ 0.6
RETREG3-210ENST00000590541 TOP3BO95985 862 aaKnown RBP18.8■□□□□ 0.6
RETREG3-210ENST00000590541 ATF6P18850 670 aa18.8■□□□□ 0.6
RETREG3-210ENST00000590541 CDC25CP30307 473 aa18.8■□□□□ 0.6
RETREG3-210ENST00000590541 CREB5Q02930 508 aa18.8■□□□□ 0.6
RETREG3-210ENST00000590541 MCL1Q07820 350 aa18.8■□□□□ 0.6
RETREG3-210ENST00000590541 RINT1Q6NUQ1 792 aa18.8■□□□□ 0.6
RETREG3-210ENST00000590541 C1orf186Q6ZWK4 172 aa18.8■□□□□ 0.6
RETREG3-210ENST00000590541 CMTM8Q8IZV2 173 aa18.8■□□□□ 0.6
RETREG3-210ENST00000590541 EBF3Q9H4W6 596 aa18.8■□□□□ 0.6
RETREG3-210ENST00000590541 C17orf75Q9HAS0 396 aa18.8■□□□□ 0.6
RETREG3-210ENST00000590541 CCL26Q9Y258 94 aa18.8■□□□□ 0.6
RETREG3-210ENST00000590541 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms