RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 BHMT2Q9H2M3 363 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 EBF3Q9H4W6 596 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 IL21Q9HBE4 155 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 GKN1Q9NS71 199 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 PDRG1Q9NUG6 133 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 MAFFQ9ULX9 164 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 LHX6Q9UPM6 363 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 KIAA1549LQ6ZVL6 1849 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 TSC2P49815 1807 aa13.93□□□□□ -0.18
PRKCSH-210ENST00000589990 BCLAF3A2AJT9 711 aaKnown RBP13.93□□□□□ -0.18
PRKCSH-210ENST00000589990 CCDC169A6NNP5 214 aa13.93□□□□□ -0.18
PRKCSH-210ENST00000589990 M0QZQ0 153 aa13.93□□□□□ -0.18
PRKCSH-210ENST00000589990 CDX4O14627 284 aaPredicted RBP13.93□□□□□ -0.18
PRKCSH-210ENST00000589990 PFKFB2O60825 505 aa13.93□□□□□ -0.18
PRKCSH-210ENST00000589990 AKAP3O75969 853 aa13.93□□□□□ -0.18
PRKCSH-210ENST00000589990 CDKL5O76039 1030 aa13.93□□□□□ -0.18
PRKCSH-210ENST00000589990 OAZ2O95190 189 aa13.93□□□□□ -0.18
PRKCSH-210ENST00000589990 LARGE1O95461 756 aa13.93□□□□□ -0.18
PRKCSH-210ENST00000589990 RPA1P27694 616 aa13.93□□□□□ -0.18
PRKCSH-210ENST00000589990 MARCKSP29966 332 aaPredicted RBP13.93□□□□□ -0.18
PRKCSH-210ENST00000589990 NPTX2P47972 431 aa13.93□□□□□ -0.18
PRKCSH-210ENST00000589990 PEX3P56589 373 aa13.93□□□□□ -0.18
PRKCSH-210ENST00000589990 GPR17Q13304 367 aa13.93□□□□□ -0.18
PRKCSH-210ENST00000589990 HAUS6Q7Z4H7 955 aa13.93□□□□□ -0.18
PRKCSH-210ENST00000589990 PSMG2Q969U7 264 aa13.93□□□□□ -0.18
PRKCSH-210ENST00000589990 FAM83CQ9BQN1 747 aa13.93□□□□□ -0.18
PRKCSH-210ENST00000589990 OBP2AQ9NY56 170 aa13.93□□□□□ -0.18
PRKCSH-210ENST00000589990 PHLPP2Q6ZVD8 1323 aa13.92□□□□□ -0.18
PRKCSH-210ENST00000589990 CELSR3Q9NYQ7 3312 aa13.92□□□□□ -0.18
PRKCSH-210ENST00000589990 TRDMT1O14717 391 aaKnown RBP13.92□□□□□ -0.18
PRKCSH-210ENST00000589990 HYAL3O43820 417 aaPredicted RBP13.92□□□□□ -0.18
PRKCSH-210ENST00000589990 CXCL8P10145 99 aa13.92□□□□□ -0.18
PRKCSH-210ENST00000589990 MCF2P10911 925 aa13.92□□□□□ -0.18
PRKCSH-210ENST00000589990 ATF6P18850 670 aa13.92□□□□□ -0.18
PRKCSH-210ENST00000589990 NMT1P30419 496 aaKnown RBP13.92□□□□□ -0.18
PRKCSH-210ENST00000589990 ALDH1A3P47895 512 aa13.92□□□□□ -0.18
PRKCSH-210ENST00000589990 MCM2P49736 904 aa13.92□□□□□ -0.18
PRKCSH-210ENST00000589990 DIS3L2Q8IYB7 885 aaKnown RBP13.92□□□□□ -0.18
PRKCSH-210ENST00000589990 NECAB1Q8N987 351 aa13.92□□□□□ -0.18
PRKCSH-210ENST00000589990 STKLD1Q8NE28 680 aa13.92□□□□□ -0.18
PRKCSH-210ENST00000589990 DEFB124Q8NES8 71 aa13.92□□□□□ -0.18
PRKCSH-210ENST00000589990 TCHPQ9BT92 498 aa13.92□□□□□ -0.18
PRKCSH-210ENST00000589990 MRPL4Q9BYD3 311 aaKnown RBP13.92□□□□□ -0.18
PRKCSH-210ENST00000589990 HAPLN2Q9GZV7 340 aa13.92□□□□□ -0.18
PRKCSH-210ENST00000589990 TASP1Q9H6P5 420 aa13.92□□□□□ -0.18
PRKCSH-210ENST00000589990 ARHGAP28Q9P2N2 729 aa13.92□□□□□ -0.18
PRKCSH-210ENST00000589990 THADAQ6YHU6 1953 aa13.92□□□□□ -0.18
PRKCSH-210ENST00000589990 OBSL1O75147 1896 aa13.91□□□□□ -0.18
PRKCSH-210ENST00000589990 TAF4O00268 1085 aa13.91□□□□□ -0.18
PRKCSH-210ENST00000589990 BCKDHBP21953 392 aa13.91□□□□□ -0.18
PRKCSH-210ENST00000589990 AARSP49588 968 aaKnown RBP eCLIP13.91□□□□□ -0.18
PRKCSH-210ENST00000589990 GALK1P51570 392 aa13.91□□□□□ -0.18
PRKCSH-210ENST00000589990 PLCB2Q00722 1185 aa13.91□□□□□ -0.18
PRKCSH-210ENST00000589990 GRSF1Q12849 480 aaKnown RBP eCLIP13.91□□□□□ -0.18
PRKCSH-210ENST00000589990 MAPK7Q13164 816 aa13.91□□□□□ -0.18
PRKCSH-210ENST00000589990 PLD1Q13393 1074 aa13.91□□□□□ -0.18
PRKCSH-210ENST00000589990 RUNX3Q13761 415 aa13.91□□□□□ -0.18
PRKCSH-210ENST00000589990 UAP1L1Q3KQV9 507 aa13.91□□□□□ -0.18
PRKCSH-210ENST00000589990 MPZL3Q6UWV2 235 aa13.91□□□□□ -0.18
PRKCSH-210ENST00000589990 APBB1IPQ7Z5R6 666 aaPredicted RBP13.91□□□□□ -0.18
PRKCSH-210ENST00000589990 TMEM150AQ86TG1 271 aa13.91□□□□□ -0.18
PRKCSH-210ENST00000589990 CAMKK1Q8N5S9 505 aa13.91□□□□□ -0.18
PRKCSH-210ENST00000589990 OR10T2Q8NGX3 314 aa13.91□□□□□ -0.18
PRKCSH-210ENST00000589990 RPLP0P6Q8NHW5 317 aa13.91□□□□□ -0.18
PRKCSH-210ENST00000589990 KIFAP3Q92845 792 aa13.91□□□□□ -0.18
PRKCSH-210ENST00000589990 TM6SF1Q9BZW5 370 aa13.91□□□□□ -0.18
PRKCSH-210ENST00000589990 ANKFY1Q9P2R3 1169 aa13.91□□□□□ -0.18
PRKCSH-210ENST00000589990 KLK13Q9UKR3 277 aa13.91□□□□□ -0.18
PRKCSH-210ENST00000589990 DENND4CQ5VZ89 1909 aa13.91□□□□□ -0.18
PRKCSH-210ENST00000589990 SOBPA7XYQ1 873 aa13.9□□□□□ -0.18
PRKCSH-210ENST00000589990 SFI1A8K8P3 1242 aa13.9□□□□□ -0.18
PRKCSH-210ENST00000589990 JAK2O60674 1132 aa13.9□□□□□ -0.18
PRKCSH-210ENST00000589990 ATG13O75143 517 aa13.9□□□□□ -0.18
PRKCSH-210ENST00000589990 HIP1RO75146 1068 aa13.9□□□□□ -0.18
PRKCSH-210ENST00000589990 CEACAM1P13688 526 aa13.9□□□□□ -0.18
PRKCSH-210ENST00000589990 GBP1P32455 592 aa13.9□□□□□ -0.18
PRKCSH-210ENST00000589990 IRX4P78413 519 aa13.9□□□□□ -0.18
PRKCSH-210ENST00000589990 ZNF174Q15697 407 aa13.9□□□□□ -0.18
PRKCSH-210ENST00000589990 ELF2Q15723 593 aa13.9□□□□□ -0.18
PRKCSH-210ENST00000589990 ARHGAP15Q53QZ3 475 aa13.9□□□□□ -0.18
PRKCSH-210ENST00000589990 DAB2IPQ5VWQ8 1189 aa13.9□□□□□ -0.18
PRKCSH-210ENST00000589990 GIPC2Q8TF65 315 aa13.9□□□□□ -0.18
PRKCSH-210ENST00000589990 USP13Q92995 863 aaPredicted RBP13.9□□□□□ -0.18
PRKCSH-210ENST00000589990 SEPT5Q99719 369 aaPredicted RBP13.9□□□□□ -0.18
PRKCSH-210ENST00000589990 RUSC1Q9BVN2 902 aa13.9□□□□□ -0.18
PRKCSH-210ENST00000589990 TPSD1Q9BZJ3 242 aa13.9□□□□□ -0.18
PRKCSH-210ENST00000589990 TMEM134Q9H6X4 195 aa13.9□□□□□ -0.18
PRKCSH-210ENST00000589990 BRMS1Q9HCU9 246 aa13.9□□□□□ -0.18
PRKCSH-210ENST00000589990 TMEM9BQ9NQ34 198 aa13.9□□□□□ -0.18
PRKCSH-210ENST00000589990 ZNF638Q14966 1978 aaKnown RBP13.89□□□□□ -0.19
PRKCSH-210ENST00000589990 TMEM8BA6NDV4 472 aa13.89□□□□□ -0.19
PRKCSH-210ENST00000589990 OR6C75A6NL08 312 aa13.89□□□□□ -0.19
PRKCSH-210ENST00000589990 E9PMD0 336 aa13.89□□□□□ -0.19
PRKCSH-210ENST00000589990 SLC16A4O15374 487 aa13.89□□□□□ -0.19
PRKCSH-210ENST00000589990 REC8O95072 547 aa13.89□□□□□ -0.19
PRKCSH-210ENST00000589990 CSRP1P21291 193 aaKnown RBP13.89□□□□□ -0.19
PRKCSH-210ENST00000589990 WEE1P30291 646 aa13.89□□□□□ -0.19
PRKCSH-210ENST00000589990 LRPAP1P30533 357 aa13.89□□□□□ -0.19
PRKCSH-210ENST00000589990 CCT6AP40227 531 aaKnown RBP13.89□□□□□ -0.19
PRKCSH-210ENST00000589990 TNFSF9P41273 254 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms