RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 LIFRP42702 1097 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 ATXN3P54252 364 aaPredicted RBP6.7□□□□□ -1.34
VPS25-204ENST00000589577 ANAPC15P60006 121 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 CYP4F8P98187 520 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 GFPT1Q06210 699 aaPredicted RBP6.7□□□□□ -1.34
VPS25-204ENST00000589577 POU5F1BQ06416 359 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 SLC14A1Q13336 389 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 NBR1Q14596 966 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 DUOXA1Q1HG43 343 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 MAP7D1Q3KQU3 841 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 GPR158Q5T848 1215 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 TMEM92Q6UXU6 159 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 REXO1Q8N1G1 1221 aaKnown RBP6.7□□□□□ -1.34
VPS25-204ENST00000589577 TTC9BQ8N6N2 239 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 BEST2Q8NFU1 509 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 ETNPPLQ8TBG4 499 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 USP33Q8TEY7 942 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 MTA3Q9BTC8 594 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 NFKBIZQ9BYH8 718 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 C22orf23Q9BZE7 217 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 LSG1Q9H089 658 aaKnown RBP6.7□□□□□ -1.34
VPS25-204ENST00000589577 PDZD7Q9H5P4 517 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 USP20Q9Y2K6 914 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 SLC12A7Q9Y666 1083 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 ABCA12Q86UK0 2595 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 KNTC1P50748 2209 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 MYO18AQ92614 2054 aaKnown RBP6.7□□□□□ -1.34
VPS25-204ENST00000589577 FBN2P35556 2912 aa6.7□□□□□ -1.34
VPS25-204ENST00000589577 USP9YO00507 2555 aaPredicted RBP6.69□□□□□ -1.34
VPS25-204ENST00000589577 TEX51A0A1B0GUA7 166 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 B8ZZF3 427 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 K7EQS6 105 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 MAP3K13O43283 966 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 TRAPPC3O43617 180 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 SOAT2O75908 522 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 TDP2O95551 362 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 NTRK1P04629 796 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 ATXN1LP0C7T5 689 aaKnown RBP6.69□□□□□ -1.34
VPS25-204ENST00000589577 GLRA2P23416 452 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 GABRR2P28476 465 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 QARSP47897 775 aaKnown RBP6.69□□□□□ -1.34
VPS25-204ENST00000589577 NCBP1Q09161 790 aaKnown RBP6.69□□□□□ -1.34
VPS25-204ENST00000589577 MXD4Q14582 209 aaPredicted RBP6.69□□□□□ -1.34
VPS25-204ENST00000589577 PTPAQ15257 358 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 CRY1Q16526 586 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 PFKFB3Q16875 520 aaPredicted RBP6.69□□□□□ -1.34
VPS25-204ENST00000589577 CTXN3Q4LDR2 81 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 COLEC12Q5KU26 742 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 CREB3L3Q68CJ9 461 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 APOA5Q6Q788 366 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 SGMS1Q86VZ5 419 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 FMNL3Q8IVF7 1028 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 NOSTRINQ8IVI9 506 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 TMTC2Q8N394 836 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 TCP11Q8WWU5 503 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 TMEM87BQ96K49 555 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 MTRQ99707 1265 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 SLC46A2Q9BY10 475 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 LRRC2Q9BYS8 371 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 ATXN3LQ9H3M9 355 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 IL21Q9HBE4 155 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 DAXXQ9UER7 740 aaPredicted RBP6.69□□□□□ -1.34
VPS25-204ENST00000589577 VAV3Q9UKW4 847 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 TPCN1Q9ULQ1 816 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 MMP17Q9ULZ9 603 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 PPME1Q9Y570 386 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 PCDHB9Q9Y5E1 797 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 ANAPC1Q9H1A4 1944 aa6.69□□□□□ -1.34
VPS25-204ENST00000589577 TP53BP1Q12888 1972 aaPredicted RBP6.68□□□□□ -1.34
VPS25-204ENST00000589577 CABIN1Q9Y6J0 2220 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 CAPN8A6NHC0 703 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 ERVH48-1M5A8F1 160 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 SLC27A2O14975 620 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 SYN3O14994 580 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 KRT38O76015 456 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 OR4Q2P0C623 313 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 CPB1P15086 417 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 CDC27P30260 824 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 YWHABP31946 246 aaKnown RBP6.68□□□□□ -1.34
VPS25-204ENST00000589577 HSPA4P34932 840 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 ARL2P36404 184 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 ANP32AP39687 249 aaKnown RBP6.68□□□□□ -1.34
VPS25-204ENST00000589577 DPP6P42658 865 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 SEC13P55735 322 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 PSMD2Q13200 908 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 SMAD1Q15797 465 aaKnown RBP6.68□□□□□ -1.34
VPS25-204ENST00000589577 Q4G0T1 1027 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 C2orf27AQ580R0 203 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 SPDYCQ5MJ68 293 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 EEF1DP3Q658K8 133 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 BLOC1S2Q6QNY1 142 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 GPR155Q7Z3F1 870 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 KRT25Q7Z3Z0 450 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 TMEM150AQ86TG1 271 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 SLC41A1Q8IVJ1 513 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 SFTPA1Q8IWL2 248 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 EXOC8Q8IYI6 725 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 CCDC33Q8N5R6 958 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 DEFB119Q8N690 84 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 PDCD7Q8N8D1 485 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms