RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	ZNF185	O15231	689 aa		16.39	■□□□□ 0.21
DDX39A-209	ENST00000589318	INHA	P05111	366 aa		16.39	■□□□□ 0.21
DDX39A-209	ENST00000589318	CFH	P08603	1231 aa		16.39	■□□□□ 0.21
DDX39A-209	ENST00000589318	WEE2	P0C1S8	567 aa		16.39	■□□□□ 0.21
DDX39A-209	ENST00000589318	PRLR	P16471	622 aa		16.39	■□□□□ 0.21
DDX39A-209	ENST00000589318	TCEAL1	Q15170	157 aa		16.39	■□□□□ 0.21
DDX39A-209	ENST00000589318	LHX8	Q68G74	356 aa		16.39	■□□□□ 0.21
DDX39A-209	ENST00000589318	SCARA5	Q6ZMJ2	495 aa		16.39	■□□□□ 0.21
DDX39A-209	ENST00000589318	KIF12	Q96FN5	646 aa		16.39	■□□□□ 0.21
DDX39A-209	ENST00000589318	SENP6	Q9GZR1	1112 aa	Predicted RBP	16.39	■□□□□ 0.21
DDX39A-209	ENST00000589318	ITGA11	Q9UKX5	1188 aa		16.39	■□□□□ 0.21
DDX39A-209	ENST00000589318	COG5	Q9UP83	839 aa		16.39	■□□□□ 0.21
DDX39A-209	ENST00000589318	DERA	Q9Y315	318 aa		16.39	■□□□□ 0.21
DDX39A-209	ENST00000589318	RECQL4	O94761	1208 aa		16.38	■□□□□ 0.21
DDX39A-209	ENST00000589318	CYP1A1	P04798	512 aa	Predicted RBP	16.38	■□□□□ 0.21
DDX39A-209	ENST00000589318	CD58	P19256	250 aa		16.38	■□□□□ 0.21
DDX39A-209	ENST00000589318	GNA15	P30679	374 aa		16.38	■□□□□ 0.21
DDX39A-209	ENST00000589318	POLR2B	P30876	1174 aa	Known RBP	16.38	■□□□□ 0.21
DDX39A-209	ENST00000589318	GNGT1	P63211	74 aa		16.38	■□□□□ 0.21
DDX39A-209	ENST00000589318	IFI16	Q16666	785 aa	Known RBP	16.38	■□□□□ 0.21
DDX39A-209	ENST00000589318	SMYD5	Q6GMV2	418 aa		16.38	■□□□□ 0.21
DDX39A-209	ENST00000589318	CCNI2	Q6ZMN8	369 aa	Predicted RBP	16.38	■□□□□ 0.21
DDX39A-209	ENST00000589318	FAXDC2	Q96IV6	333 aa		16.38	■□□□□ 0.21
DDX39A-209	ENST00000589318	SDCBP2	Q9H190	292 aa		16.38	■□□□□ 0.21
DDX39A-209	ENST00000589318	SAGE1	Q9NXZ1	904 aa		16.38	■□□□□ 0.21
DDX39A-209	ENST00000589318	DPP3	Q9NY33	737 aa		16.38	■□□□□ 0.21
DDX39A-209	ENST00000589318	CNTN3	Q9P232	1028 aa		16.38	■□□□□ 0.21
DDX39A-209	ENST00000589318	NXF1	Q9UBU9	619 aa	Known RBP	16.38	■□□□□ 0.21
DDX39A-209	ENST00000589318	AGPS	O00116	658 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	CTSH	P09668	335 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	AKAP5	P24588	427 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	ATIC	P31939	592 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	ACLY	P53396	1101 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	HADHB	P55084	474 aa	Known RBP	16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	IRX1	P78414	480 aa	Predicted RBP	16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	WDR72	Q3MJ13	1102 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	ZNF667	Q5HYK9	610 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	ACAD10	Q6JQN1	1059 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	RNF180	Q86T96	592 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	TAX1BP1	Q86VP1	789 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	SMG8	Q8ND04	991 aa	Known RBP	16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	OSBPL9	Q96SU4	736 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	ZSWIM1	Q9BR11	485 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	SELENOO	Q9BVL4	669 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	OSBPL7	Q9BZF2	842 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	TRIM6	Q9C030	488 aa	Predicted RBP	16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	RNF39	Q9H2S5	420 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	HYOU1	Q9Y4L1	999 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	PDE2A	O00408	941 aa	Predicted RBP	16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	STAU1	O95793	577 aa	Known RBP	16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	GPC5	P78333	572 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	ITIH3	Q06033	890 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	PTGIS	Q16647	500 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	XKR4	Q5GH76	650 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	RSPH3	Q86UC2	560 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	CREG2	Q8IUH2	290 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	SLAIN1	Q8ND83	568 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	PACSIN2	Q9UNF0	486 aa	Predicted RBP	16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318	AGAP1	Q9UPQ3	857 aa		16.37	■□□□□ 0.21
DDX39A-209	ENST00000589318		M0QZ92	97 aa		16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	NDUFAB1	O14561	156 aa		16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	BUB1B	O60566	1050 aa	Predicted RBP	16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	CYP1A2	P05177	515 aa		16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	TCP1	P17987	556 aa	Known RBP	16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	RAP1GAP	P47736	663 aa		16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	YARS	P54577	528 aa	Known RBP	16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	CDH8	P55286	799 aa		16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	CENPC	Q03188	943 aa		16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	ITGA7	Q13683	1181 aa		16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	EMC10	Q5UCC4	262 aa		16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	RHOT2	Q8IXI1	618 aa		16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	ARRDC4	Q8NCT1	418 aa		16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	ZNF606	Q8WXB4	792 aa		16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	CYFIP2	Q96F07	1278 aa		16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	HPDL	Q96IR7	371 aa		16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	MMS19	Q96T76	1030 aa		16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	PSMB7	Q99436	277 aa		16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	SMYD3	Q9H7B4	428 aa		16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	ACTR5	Q9H9F9	607 aa	Predicted RBP	16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	TUBGCP4	Q9UGJ1	667 aa		16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	STXBP5L	Q9Y2K9	1186 aa		16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	IPP	Q9Y573	584 aa		16.36	■□□□□ 0.21
DDX39A-209	ENST00000589318	GOLGA6L7	A0A1B0GV03	622 aa		16.35	■□□□□ 0.21
DDX39A-209	ENST00000589318	ATMIN	O43313	823 aa	Predicted RBP	16.35	■□□□□ 0.21
DDX39A-209	ENST00000589318	CABYR	O75952	493 aa		16.35	■□□□□ 0.21
DDX39A-209	ENST00000589318	MTA2	O94776	668 aa		16.35	■□□□□ 0.21
DDX39A-209	ENST00000589318	GRK4	P32298	578 aa		16.35	■□□□□ 0.21
DDX39A-209	ENST00000589318	CXCR5	P32302	372 aa		16.35	■□□□□ 0.21
DDX39A-209	ENST00000589318	NOMO3	P69849	1222 aa		16.35	■□□□□ 0.21
DDX39A-209	ENST00000589318	RBP5	P82980	135 aa		16.35	■□□□□ 0.21
DDX39A-209	ENST00000589318	TRIM71	Q2Q1W2	868 aa	Known RBP	16.35	■□□□□ 0.21
DDX39A-209	ENST00000589318	ZNF394	Q53GI3	561 aa		16.35	■□□□□ 0.21
DDX39A-209	ENST00000589318	GLRA4	Q5JXX5	417 aa		16.35	■□□□□ 0.21
DDX39A-209	ENST00000589318	WHAMM	Q8TF30	809 aa		16.35	■□□□□ 0.21
DDX39A-209	ENST00000589318	AEN	Q8WTP8	325 aa	Known RBP	16.35	■□□□□ 0.21
DDX39A-209	ENST00000589318	C18orf25	Q96B23	403 aa	Predicted RBP	16.35	■□□□□ 0.21
DDX39A-209	ENST00000589318	CAPZA3	Q96KX2	299 aa		16.35	■□□□□ 0.21
DDX39A-209	ENST00000589318	APOL6	Q9BWW8	343 aa		16.35	■□□□□ 0.21
DDX39A-209	ENST00000589318	RNF19A	Q9NV58	838 aa		16.35	■□□□□ 0.21
DDX39A-209	ENST00000589318	CHORDC1	Q9UHD1	332 aa	Predicted RBP	16.35	■□□□□ 0.21

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms