RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 CILPO75339 1184 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 LSM8O95777 96 aaKnown RBP11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 CYP1A1P04798 512 aaPredicted RBP11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 MYBL1P10243 752 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 RFC2P35250 354 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 MLH1P40692 756 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 NOP2P46087 812 aaKnown RBP11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 CDH8P55286 799 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 INCA1Q0VD86 236 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 FAAP100Q0VG06 881 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 GRIK3Q13003 919 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 MBTPS1Q14703 1052 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 CLEC16AQ2KHT3 1053 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 SCARA5Q6ZMJ2 495 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 NECAB2Q7Z6G3 386 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 RTN4RL1Q86UN2 441 aaPredicted RBP11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 SLC35F6Q8N357 371 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 TOP6BLQ8N6T0 577 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 RNF169Q8NCN4 708 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 TMEM35BQ8NCS4 154 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 GSTCDQ8NEC7 633 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 DBF4BQ8NFT6 615 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 URGCPQ8TCY9 931 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 LPPQ93052 612 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 PCDHB18PQ96TA0 734 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 NAPGQ99747 312 aaPredicted RBP11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 NT5C1AQ9BXI3 368 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 OSBPL7Q9BZF2 842 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 IRX2Q9BZI1 471 aaPredicted RBP11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 CXCL16Q9H2A7 254 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 LHX5Q9H2C1 402 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 TMEM161AQ9NX61 479 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 PCDHGC3Q9UN70 934 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 JRKLQ9Y4A0 524 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 DUSP10Q9Y6W6 482 aa11.19□□□□□ -0.62
CHMP1B-202ENST00000588284 A0A0U1RQJ8 604 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 HOXA2O43364 376 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 NBNO60934 754 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 URI1O94763 535 aaPredicted RBP11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 ABL1P00519 1130 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 CXCL10P02778 98 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 UNGP13051 313 aaPredicted RBP11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 CD19P15391 556 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 NSFP46459 744 aaKnown RBP11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 RAD23BP54727 409 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 LILRA4P59901 499 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 TUSC3Q13454 348 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 CNGA2Q16280 664 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 TRIM60Q495X7 471 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 ZNF394Q53GI3 561 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 LIN9Q5TKA1 542 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 DCLRE1AQ6PJP8 1040 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 SYCE1Q8N0S2 351 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 APPL2Q8NEU8 664 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 OLIG1Q8TAK6 271 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 ATRIPQ8WXE1 791 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 RFFLQ8WZ73 363 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 HEXIM2Q96MH2 286 aaKnown RBP11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 ZFP42Q96MM3 310 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 SDCBP2Q9H190 292 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 SNX25Q9H3E2 840 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 SMYD3Q9H7B4 428 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 TMEM39AQ9NV64 488 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 MIOSQ9NXC5 875 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 TRIM10Q9UDY6 481 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 LRFN2Q9ULH4 789 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 PCDHB7Q9Y5E2 793 aa11.18□□□□□ -0.62
CHMP1B-202ENST00000588284 RALGAPA2Q2PPJ7 1873 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 PODXLO00592 558 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 CYB561D2O14569 222 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 KIF4AO95239 1232 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 MOCS3O95396 460 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 PRLRP16471 622 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 GNL1P36915 607 aaPredicted RBP11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 SCNN1GP51170 649 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 NDST1P52848 882 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 TERF1P54274 439 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 HADHBP55084 474 aaKnown RBP11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 SNX16P57768 344 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 CENPCQ03188 943 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 SOX4Q06945 474 aaPredicted RBP11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 SGO2Q562F6 1265 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 NOMO2Q5JPE7 1267 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 DSTYKQ6XUX3 929 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 LIMS2Q7Z4I7 341 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 PHF13Q86YI8 300 aaPredicted RBP11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 CRYBG2Q8N1P7 616 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 TMEM86AQ8N2M4 240 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 SLC4A11Q8NBS3 891 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 MSANTD4Q8NCY6 345 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 OR6B3Q8NGW1 331 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 SPATA18Q8TC71 538 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 WHAMMQ8TF30 809 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 CYFIP2Q96F07 1278 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 PAWRQ96IZ0 340 aaKnown RBP11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 TNIP3Q96KP6 325 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 FAM193BQ96PV7 902 aaPredicted RBP11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 WDR24Q96S15 920 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 PACSIN1Q9BY11 444 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 MIS12Q9H081 205 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms