RNA–Protein interactions for RNA: ENST00000587760.5

NFIX-209, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-209ENST00000587760 PLEKHA7Q6IQ23 1121 aa18.01■□□□□ 0.47
NFIX-209ENST00000587760 FBXO38Q6PIJ6 1188 aa18.01■□□□□ 0.47
NFIX-209ENST00000587760 TMCO3Q6UWJ1 677 aa18.01■□□□□ 0.47
NFIX-209ENST00000587760 PASD1Q8IV76 773 aa18.01■□□□□ 0.47
NFIX-209ENST00000587760 NOA1Q8NC60 698 aaKnown RBP18.01■□□□□ 0.47
NFIX-209ENST00000587760 HNRNPLLQ8WVV9 542 aaKnown RBP18.01■□□□□ 0.47
NFIX-209ENST00000587760 ZMAT2Q96NC0 199 aaKnown RBP18.01■□□□□ 0.47
NFIX-209ENST00000587760 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.01■□□□□ 0.47
NFIX-209ENST00000587760 SMYD3Q9H7B4 428 aa18.01■□□□□ 0.47
NFIX-209ENST00000587760 WDR35Q9P2L0 1181 aa18.01■□□□□ 0.47
NFIX-209ENST00000587760 ANAPC7Q9UJX3 599 aa18.01■□□□□ 0.47
NFIX-209ENST00000587760 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.01■□□□□ 0.47
NFIX-209ENST00000587760 HES2Q9Y543 173 aa18.01■□□□□ 0.47
NFIX-209ENST00000587760 DDX3YO15523 660 aaKnown RBP18■□□□□ 0.47
NFIX-209ENST00000587760 CHRNA1P02708 482 aa18■□□□□ 0.47
NFIX-209ENST00000587760 INHAP05111 366 aa18■□□□□ 0.47
NFIX-209ENST00000587760 GRK4P32298 578 aa18■□□□□ 0.47
NFIX-209ENST00000587760 MAN1A1P33908 653 aa18■□□□□ 0.47
NFIX-209ENST00000587760 DNA2P51530 1060 aa18■□□□□ 0.47
NFIX-209ENST00000587760 RBM10P98175 930 aaKnown RBP18■□□□□ 0.47
NFIX-209ENST00000587760 CNGA2Q16280 664 aa18■□□□□ 0.47
NFIX-209ENST00000587760 FBXO47Q5MNV8 452 aa18■□□□□ 0.47
NFIX-209ENST00000587760 C9orf57Q5W0N0 161 aa18■□□□□ 0.47
NFIX-209ENST00000587760 SCARA3Q6AZY7 606 aa18■□□□□ 0.47
NFIX-209ENST00000587760 ERICH1Q86X53 443 aa18■□□□□ 0.47
NFIX-209ENST00000587760 SLC4A11Q8NBS3 891 aa18■□□□□ 0.47
NFIX-209ENST00000587760 ZNF784Q8NCA9 323 aaPredicted RBP18■□□□□ 0.47
NFIX-209ENST00000587760 GADD45GIP1Q8TAE8 222 aaPredicted RBP18■□□□□ 0.47
NFIX-209ENST00000587760 C11orf70Q9BRQ4 267 aa18■□□□□ 0.47
NFIX-209ENST00000587760 APOL6Q9BWW8 343 aa18■□□□□ 0.47
NFIX-209ENST00000587760 SDCBP2Q9H190 292 aa18■□□□□ 0.47
NFIX-209ENST00000587760 GOLPH3Q9H4A6 298 aa18■□□□□ 0.47
NFIX-209ENST00000587760 ANKZF1Q9H8Y5 726 aa18■□□□□ 0.47
NFIX-209ENST00000587760 FAM105AQ9NUU6 356 aa18■□□□□ 0.47
NFIX-209ENST00000587760 GIT1Q9Y2X7 761 aa18■□□□□ 0.47
NFIX-209ENST00000587760 PIRO00625 290 aa17.99■□□□□ 0.47
NFIX-209ENST00000587760 ATP8B1O43520 1251 aa17.99■□□□□ 0.47
NFIX-209ENST00000587760 RHOXF2BP0C7M4 288 aa17.99■□□□□ 0.47
NFIX-209ENST00000587760 ITGA4P13612 1032 aa17.99■□□□□ 0.47
NFIX-209ENST00000587760 AKAP5P24588 427 aa17.99■□□□□ 0.47
NFIX-209ENST00000587760 CTNNA1P35221 906 aaKnown RBP17.99■□□□□ 0.47
NFIX-209ENST00000587760 RAP1GAPP47736 663 aa17.99■□□□□ 0.47
NFIX-209ENST00000587760 TAF6P49848 677 aa17.99■□□□□ 0.47
NFIX-209ENST00000587760 CDH8P55286 799 aa17.99■□□□□ 0.47
NFIX-209ENST00000587760 NFX1Q12986 1120 aaKnown RBP17.99■□□□□ 0.47
NFIX-209ENST00000587760 PAK2Q13177 524 aa17.99■□□□□ 0.47
NFIX-209ENST00000587760 MAP9Q49MG5 647 aa17.99■□□□□ 0.47
NFIX-209ENST00000587760 DPH6Q7L8W6 267 aa17.99■□□□□ 0.47
NFIX-209ENST00000587760 SMG8Q8ND04 991 aaKnown RBP17.99■□□□□ 0.47
NFIX-209ENST00000587760 RHOXF2Q9BQY4 288 aa17.99■□□□□ 0.47
NFIX-209ENST00000587760 ZSWIM1Q9BR11 485 aa17.99■□□□□ 0.47
NFIX-209ENST00000587760 ARFGAP3Q9NP61 516 aa17.99■□□□□ 0.47
NFIX-209ENST00000587760 UBN1Q9NPG3 1134 aa17.99■□□□□ 0.47
NFIX-209ENST00000587760 GDAP2Q9NXN4 497 aa17.99■□□□□ 0.47
NFIX-209ENST00000587760 TUBGCP4Q9UGJ1 667 aa17.99■□□□□ 0.47
NFIX-209ENST00000587760 IP6K2Q9UHH9 426 aa17.99■□□□□ 0.47
NFIX-209ENST00000587760 PDCD11Q14690 1871 aaKnown RBP17.99■□□□□ 0.47
NFIX-209ENST00000587760 GRIN2DO15399 1336 aa17.98■□□□□ 0.47
NFIX-209ENST00000587760 GOLGA6L10A0A0M3HER8 536 aa17.98■□□□□ 0.47
NFIX-209ENST00000587760 ATMINO43313 823 aaPredicted RBP17.98■□□□□ 0.47
NFIX-209ENST00000587760 ZNF623O75123 536 aa17.98■□□□□ 0.47
NFIX-209ENST00000587760 CALCAP01258 141 aa17.98■□□□□ 0.47
NFIX-209ENST00000587760 CTSHP09668 335 aa17.98■□□□□ 0.47
NFIX-209ENST00000587760 COMTP21964 271 aa17.98■□□□□ 0.47
NFIX-209ENST00000587760 PAX3P23760 479 aa17.98■□□□□ 0.47
NFIX-209ENST00000587760 LRPAP1P30533 357 aa17.98■□□□□ 0.47
NFIX-209ENST00000587760 GUCY2FP51841 1108 aa17.98■□□□□ 0.47
NFIX-209ENST00000587760 SNX16P57768 344 aa17.98■□□□□ 0.47
NFIX-209ENST00000587760 C2orf54Q08AI8 447 aa17.98■□□□□ 0.47
NFIX-209ENST00000587760 PTP4A2Q12974 167 aa17.98■□□□□ 0.47
NFIX-209ENST00000587760 SEL1L2Q5TEA6 688 aa17.98■□□□□ 0.47
NFIX-209ENST00000587760 MMS22LQ6ZRQ5 1243 aa17.98■□□□□ 0.47
NFIX-209ENST00000587760 FEZF2Q8TBJ5 459 aa17.98■□□□□ 0.47
NFIX-209ENST00000587760 WHAMMQ8TF30 809 aa17.98■□□□□ 0.47
NFIX-209ENST00000587760 ZNF296Q8WUU4 475 aaPredicted RBP17.98■□□□□ 0.47
NFIX-209ENST00000587760 TFAP2BQ92481 460 aa17.98■□□□□ 0.47
NFIX-209ENST00000587760 PGBD4Q96DM1 585 aa17.98■□□□□ 0.47
NFIX-209ENST00000587760 HEXIM2Q96MH2 286 aaKnown RBP17.98■□□□□ 0.47
NFIX-209ENST00000587760 ERVK-5Q9HDB9 667 aa17.98■□□□□ 0.47
NFIX-209ENST00000587760 PCDHA3Q9Y5H8 950 aa17.98■□□□□ 0.47
NFIX-209ENST00000587760 SNX9Q9Y5X1 595 aa17.98■□□□□ 0.47
NFIX-209ENST00000587760 A0A0U1RQG5 324 aaPredicted RBP17.97■□□□□ 0.47
NFIX-209ENST00000587760 TMEM110-MUSTN1A8MSY1 372 aa17.97■□□□□ 0.47
NFIX-209ENST00000587760 PROSCO94903 275 aa17.97■□□□□ 0.47
NFIX-209ENST00000587760 SETSIPP0DME0 302 aa17.97■□□□□ 0.47
NFIX-209ENST00000587760 YY1P25490 414 aa17.97■□□□□ 0.47
NFIX-209ENST00000587760 NDST1P52848 882 aa17.97■□□□□ 0.47
NFIX-209ENST00000587760 GSCP56915 257 aaPredicted RBP17.97■□□□□ 0.47
NFIX-209ENST00000587760 MAMLD1Q13495 774 aa17.97■□□□□ 0.47
NFIX-209ENST00000587760 C8orf74Q6P047 294 aa17.97■□□□□ 0.47
NFIX-209ENST00000587760 DNAJC24Q6P3W2 148 aa17.97■□□□□ 0.47
NFIX-209ENST00000587760 MRPL10Q7Z7H8 261 aaKnown RBP17.97■□□□□ 0.47
NFIX-209ENST00000587760 C1orf131Q8NDD1 294 aaKnown RBP17.97■□□□□ 0.47
NFIX-209ENST00000587760 CD101Q93033 1021 aa17.97■□□□□ 0.47
NFIX-209ENST00000587760 MS4A14Q96JA4 679 aa17.97■□□□□ 0.47
NFIX-209ENST00000587760 ELOVL4Q9GZR5 314 aa17.97■□□□□ 0.47
NFIX-209ENST00000587760 TMEM59LQ9UK28 342 aa17.97■□□□□ 0.47
NFIX-209ENST00000587760 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.97■□□□□ 0.47
NFIX-209ENST00000587760 KPNA7A9QM74 516 aa17.96■□□□□ 0.47
NFIX-209ENST00000587760 KBTBD13C9JR72 458 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms