RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 RBP5P82980 135 aa13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 ITIH3Q06033 890 aa13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 ACVR2BQ13705 512 aa13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 PPP2R5DQ14738 602 aa13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 GNASQ5JWF2 1037 aa13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 DARS2Q6PI48 645 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 C1orf228Q6PIY5 440 aa13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 GPR88Q9GZN0 384 aa13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 DPP3Q9NY33 737 aa13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 TJP3O95049 919 aa13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 PDGFRAP16234 1089 aa13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 CDH6P55285 790 aa13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 PTENP60484 403 aa13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 ZNF484Q5JVG2 852 aa13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 PRELID2Q8N945 189 aa13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 STMN4Q9H169 189 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 SEPT10Q9P0V9 454 aa13.17□□□□□ -0.3
SMARCA4-208ENST00000585799 NCANO14594 1321 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 GPR25O00155 361 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 MAPK13O15264 365 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 PROSCO94903 275 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 VNN1O95497 513 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 LRRC14Q15048 493 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 TMED2Q15363 201 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 LONRF1Q17RB8 773 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 C11orf63Q6NUN7 778 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 DENND1BQ6P3S1 775 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 GPR142Q7Z601 462 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 CCDC13Q8IYE1 715 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 BEST2Q8NFU1 509 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 MDM1Q8TC05 714 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 MORC4Q8TE76 937 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 RBM41Q96IZ5 413 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 CABS1Q96KC9 395 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 NEUROG2Q9H2A3 272 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 TMEM134Q9H6X4 195 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 GDF3Q9NR23 364 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 NKIRAS1Q9NYS0 192 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 DDX3YO15523 660 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 GRIN3BO60391 1043 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 RPL21P46778 160 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 LIG3P49916 1009 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 ARSEP51690 589 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 CASC4Q6P4E1 433 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 MICALCLQ6ZW33 695 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 ZNF677Q86XU0 584 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 GDAP1Q8TB36 358 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 PWWP2AQ96N64 755 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 NIFKQ9BYG3 293 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 SEMA4AQ9H3S1 761 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 INTS9Q9NV88 658 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 GPATCH2LQ9NWQ4 482 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 SAE1Q9UBE0 346 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 GAS2O43903 313 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 GCLCP48506 637 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 ZNF354CQ86Y25 554 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 PALM2Q8IXS6 379 aa13.16□□□□□ -0.3
SMARCA4-208ENST00000585799 ARF4P18085 180 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 SLC1A1P43005 524 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 ITGA8P53708 1063 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 TAS2R40P59535 323 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 TINF2Q9BSI4 451 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 STRA6Q9BX79 667 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 BTNL10A8MVZ5 291 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 HMGB1P1B2RPK0 211 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 O00370 1275 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 CST8O60676 142 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 PPFIA4O75335 1185 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 SLC26A2P50443 739 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 IFT88Q13099 833 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 P3H1Q32P28 736 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 PAN2Q504Q3 1202 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 FOXR1Q6PIV2 292 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 CCDC121Q6ZUS5 278 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 ANKMY2Q8IV38 441 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 PAF1Q8N7H5 531 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 ATL2Q8NHH9 583 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 THOC1Q96FV9 657 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 STRIP2Q9ULQ0 834 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 ADAMTS5Q9UNA0 930 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 PCDHA3Q9Y5H8 950 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 MCF2LO15068 1137 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 SLMAPQ14BN4 828 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 MFSD7Q6UXD7 560 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 NME8Q8N427 588 aa13.15□□□□□ -0.3
SMARCA4-208ENST00000585799 IL18RAPO95256 599 aa13.14□□□□□ -0.31
SMARCA4-208ENST00000585799 ASS1P00966 412 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-208ENST00000585799 IRAK1P51617 712 aa13.14□□□□□ -0.31
SMARCA4-208ENST00000585799 NDST1P52848 882 aa13.14□□□□□ -0.31
SMARCA4-208ENST00000585799 YWHAGP61981 247 aaKnown RBP eCLIP13.14□□□□□ -0.314e-6■■□□□ 14.5
SMARCA4-208ENST00000585799 NOMO3P69849 1222 aa13.14□□□□□ -0.31
SMARCA4-208ENST00000585799 PTPN11Q06124 597 aaPredicted RBP13.14□□□□□ -0.31
SMARCA4-208ENST00000585799 BRI3BPQ8WY22 251 aa13.14□□□□□ -0.31
SMARCA4-208ENST00000585799 RUNDC3BQ96NL0 473 aa13.14□□□□□ -0.31
SMARCA4-208ENST00000585799 NT5C1AQ9BXI3 368 aa13.14□□□□□ -0.31
SMARCA4-208ENST00000585799 ABHD16BQ9H3Z7 469 aa13.14□□□□□ -0.31
SMARCA4-208ENST00000585799 LRRC4Q9HBW1 653 aa13.14□□□□□ -0.31
SMARCA4-208ENST00000585799 GOLGA7BQ2TAP0 167 aa13.14□□□□□ -0.31
SMARCA4-208ENST00000585799 DCAF12L1Q5VU92 463 aa13.14□□□□□ -0.31
SMARCA4-208ENST00000585799 PLPPR4Q7Z2D5 763 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms