RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 LRRC10BA6NIK2 292 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 C2CD2LO14523 706 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 GABRDO14764 452 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 P4HA2O15460 535 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 CLASP2O75122 1294 aaKnown RBP14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 AFPP02771 609 aaKnown RBP14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 HOXD11P31277 338 aaPredicted RBP14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 GTF2F1P35269 517 aaKnown RBP eCLIP14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 PIK3CAP42336 1068 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 MTIF2P46199 727 aaKnown RBP14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 MYL7Q01449 175 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 HYAL1Q12794 435 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 MYO1EQ12965 1108 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 KRT31Q15323 416 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 PSMD5Q16401 504 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 DUSP6Q16828 381 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 CTC1Q2NKJ3 1217 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 SGSM1Q2NKQ1 1148 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 ZNF699Q32M78 642 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 DPY19L2P1Q6NXN4 242 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 DPH6Q7L8W6 267 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 PDCL2Q8N4E4 241 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 KBTBD7Q8WVZ9 684 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 TAF4BQ92750 862 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 PPP2R3CQ969Q6 453 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 SDCBP2Q9H190 292 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 MRPL17Q9NRX2 175 aaKnown RBP14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 FNIP2Q9P278 1114 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 LIMA1Q9UHB6 759 aaKnown RBP14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 BACE2Q9Y5Z0 518 aa14.3□□□□□ -0.12
CHAF1A-202ENST00000585371 SMTNL1A8MU46 457 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 TEX28O15482 410 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 CAVIN2O95810 425 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 ODC1P11926 461 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 ATP1A3P13637 1013 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 RPL17P18621 184 aaKnown RBP14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 ASPAP45381 313 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 NOP14P78316 857 aaKnown RBP14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 ZP2Q05996 745 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 WDR72Q3MJ13 1102 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 VWA3BQ502W6 1294 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 SLC8B1Q6J4K2 584 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 KIAA1841Q6NSI8 718 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 ANKS3Q6ZW76 656 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 LUZP1Q86V48 1076 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 ADHFE1Q8IWW8 467 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 TOP6BLQ8N6T0 577 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 APPL2Q8NEU8 664 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 VN1R2Q8NFZ6 395 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 MICAL1Q8TDZ2 1067 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 SLC22A17Q8WUG5 538 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 TATDN2Q93075 761 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 TMEM209Q96SK2 561 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 BCO2Q9BYV7 579 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 SMYD3Q9H7B4 428 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.29□□□□□ -0.122e-6■■■■■ 96.1
CHAF1A-202ENST00000585371 TAB2Q9NYJ8 693 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 MAGEC2Q9UBF1 373 aaPredicted RBP14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 FBXL5Q9UKA1 691 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 SSX2IPQ9Y2D8 614 aa14.29□□□□□ -0.12
CHAF1A-202ENST00000585371 GTPBP10A4D1E9 387 aaKnown RBP14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 C19orf67A6NJJ6 358 aa14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 PER2O15055 1255 aa14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 DCXO43602 365 aa14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 HCRTO43612 131 aa14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 N4BP1O75113 896 aaKnown RBP14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 TACC1O75410 805 aa14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 GLP2RO95838 553 aa14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 FAM163BP0C2L3 166 aa14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 LTBRP36941 435 aa14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 COPB1P53618 953 aaKnown RBP14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 CDH8P55286 799 aa14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 YWHAHQ04917 246 aaPredicted RBP14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 KCNMA1Q12791 1236 aa14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 ZNF667Q5HYK9 610 aa14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 OVOS1Q6IE37 1185 aa14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 LILRA6Q6PI73 481 aa14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 CREBRFQ8IUR6 639 aa14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 ADGRF2Q8IZF7 708 aa14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 EHBP1Q8NDI1 1231 aa14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 OR10T2Q8NGX3 314 aa14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 SPATA18Q8TC71 538 aa14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 FAM200AQ8TCP9 573 aa14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 MRPL45Q9BRJ2 306 aaKnown RBP14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 NDST4Q9H3R1 872 aa14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 TSPY26PQ9H489 355 aa14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 NXF1Q9UBU9 619 aaKnown RBP14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 DSEQ9UL01 958 aa14.28□□□□□ -0.12
CHAF1A-202ENST00000585371 C2orf16Q68DN1 1984 aa14.27□□□□□ -0.12
CHAF1A-202ENST00000585371 H7C4K7 107 aa14.27□□□□□ -0.13
CHAF1A-202ENST00000585371 HUS1O60921 280 aa14.27□□□□□ -0.13
CHAF1A-202ENST00000585371 VNN2O95498 520 aa14.27□□□□□ -0.13
CHAF1A-202ENST00000585371 PRKCSHP14314 528 aaPredicted RBP14.27□□□□□ -0.13
CHAF1A-202ENST00000585371 WARSP23381 471 aaKnown RBP14.27□□□□□ -0.13
CHAF1A-202ENST00000585371 RAP1GAPP47736 663 aa14.27□□□□□ -0.13
CHAF1A-202ENST00000585371 NRIP1P48552 1158 aa14.27□□□□□ -0.13
CHAF1A-202ENST00000585371 CLCN4P51793 760 aa14.27□□□□□ -0.13
CHAF1A-202ENST00000585371 RBM10P98175 930 aaKnown RBP14.27□□□□□ -0.13
CHAF1A-202ENST00000585371 RAB33AQ14088 237 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms