RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 TNFSF9P41273 254 aa11.29□□□□□ -0.6
CASC3-210ENST00000584997 AARSP49588 968 aaKnown RBP eCLIP11.29□□□□□ -0.67e-10■■■■□ 22.7
CASC3-210ENST00000584997 PLCB2Q00722 1185 aa11.29□□□□□ -0.6
CASC3-210ENST00000584997 CCINQ13939 588 aa11.29□□□□□ -0.6
CASC3-210ENST00000584997 VEPH1Q14D04 833 aa11.29□□□□□ -0.6
CASC3-210ENST00000584997 WDR44Q5JSH3 913 aa11.29□□□□□ -0.6
CASC3-210ENST00000584997 CENPPQ6IPU0 288 aa11.29□□□□□ -0.6
CASC3-210ENST00000584997 DNAJB7Q7Z6W7 309 aaPredicted RBP11.29□□□□□ -0.6
CASC3-210ENST00000584997 WDR5BQ86VZ2 330 aa11.29□□□□□ -0.6
CASC3-210ENST00000584997 SYNPOQ8N3V7 929 aa11.29□□□□□ -0.6
CASC3-210ENST00000584997 FAM160A2Q8N612 972 aaPredicted RBP11.29□□□□□ -0.6
CASC3-210ENST00000584997 TTC9BQ8N6N2 239 aa11.29□□□□□ -0.6
CASC3-210ENST00000584997 C12orf50Q8NA57 414 aaPredicted RBP11.29□□□□□ -0.6
CASC3-210ENST00000584997 BPIFB1Q8TDL5 484 aa11.29□□□□□ -0.6
CASC3-210ENST00000584997 FAM212AQ96EL1 285 aa11.29□□□□□ -0.6
CASC3-210ENST00000584997 CDK5RAP3Q96JB5 506 aa11.29□□□□□ -0.6
CASC3-210ENST00000584997 SEPT5Q99719 369 aaPredicted RBP11.29□□□□□ -0.6
CASC3-210ENST00000584997 MMTAG2Q9BU76 263 aaKnown RBP11.29□□□□□ -0.6
CASC3-210ENST00000584997 OBP2AQ9NY56 170 aa11.29□□□□□ -0.6
CASC3-210ENST00000584997 LARSQ9P2J5 1176 aaKnown RBP11.29□□□□□ -0.6
CASC3-210ENST00000584997 TSC2P49815 1807 aa11.29□□□□□ -0.6
CASC3-210ENST00000584997 LACTBL1A8MY62 500 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 HNRNPDLO14979 420 aaKnown RBP11.28□□□□□ -0.6
CASC3-210ENST00000584997 PRAMEF12O95522 483 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 CDC25CP30307 473 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 HOXA6P31267 233 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 LIG4P49917 911 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 TOB1P50616 345 aaPredicted RBP11.28□□□□□ -0.6
CASC3-210ENST00000584997 GUCY2FP51841 1108 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 CYP4F8P98187 520 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 CACNB1Q02641 598 aaPredicted RBP11.28□□□□□ -0.6
CASC3-210ENST00000584997 TNK2Q07912 1038 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 PTPAQ15257 358 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 ZBTB6Q15916 424 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 TAF12Q16514 161 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 KYAT1Q16773 422 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 ITPRIPL2Q3MIP1 535 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 MGAT5BQ3V5L5 792 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 SLC39A12Q504Y0 691 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 SYT2Q8N9I0 419 aaPredicted RBP11.28□□□□□ -0.6
CASC3-210ENST00000584997 SENP8Q96LD8 212 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 LRRC3BQ96PB8 259 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 TMEM209Q96SK2 561 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 PLIN2Q99541 437 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 LPIN3Q9BQK8 851 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 MKNK1Q9BUB5 465 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 HAPLN2Q9GZV7 340 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 TASP1Q9H6P5 420 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 RPF1Q9H9Y2 349 aaKnown RBP11.28□□□□□ -0.6
CASC3-210ENST00000584997 C2orf42Q9NWW7 574 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 THG1LQ9NWX6 298 aaKnown RBP11.28□□□□□ -0.6
CASC3-210ENST00000584997 KCND2Q9NZV8 630 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 CEP295Q9C0D2 2601 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 CHD6Q8TD26 2715 aa11.28□□□□□ -0.6
CASC3-210ENST00000584997 SCN1AP35498 2009 aa11.27□□□□□ -0.61
CASC3-210ENST00000584997 AXIN1O15169 862 aa11.27□□□□□ -0.61
CASC3-210ENST00000584997 OGTO15294 1046 aa11.27□□□□□ -0.61
CASC3-210ENST00000584997 RPP40O75818 363 aaKnown RBP11.27□□□□□ -0.61
CASC3-210ENST00000584997 CCDC192P0DO97 292 aa11.27□□□□□ -0.61
CASC3-210ENST00000584997 ANP32AP39687 249 aaKnown RBP11.27□□□□□ -0.61
CASC3-210ENST00000584997 TUFMP49411 452 aaKnown RBP11.27□□□□□ -0.61
CASC3-210ENST00000584997 MCM2P49736 904 aa11.27□□□□□ -0.61
CASC3-210ENST00000584997 LILRA4P59901 499 aa11.27□□□□□ -0.61
CASC3-210ENST00000584997 SF3A2Q15428 464 aaKnown RBP11.27□□□□□ -0.61
CASC3-210ENST00000584997 ENOX2Q16206 610 aaKnown RBP11.27□□□□□ -0.61
CASC3-210ENST00000584997 IL17AQ16552 155 aa11.27□□□□□ -0.61
CASC3-210ENST00000584997 KCTD17Q8N5Z5 321 aa11.27□□□□□ -0.61
CASC3-210ENST00000584997 ZSCAN31Q96LW9 406 aaPredicted RBP11.27□□□□□ -0.61
CASC3-210ENST00000584997 IPO9Q96P70 1041 aaKnown RBP11.27□□□□□ -0.61
CASC3-210ENST00000584997 TSPAN18Q96SJ8 248 aa11.27□□□□□ -0.61
CASC3-210ENST00000584997 ARRDC1-AS1Q9H2J1 176 aa11.27□□□□□ -0.61
CASC3-210ENST00000584997 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.27□□□□□ -0.61
CASC3-210ENST00000584997 SH2B1Q9NRF2 756 aaPredicted RBP11.27□□□□□ -0.61
CASC3-210ENST00000584997 HSFX1Q9UBD0 423 aa11.27□□□□□ -0.61
CASC3-210ENST00000584997 CACNA1GO43497 2377 aa11.27□□□□□ -0.61
CASC3-210ENST00000584997 DENND4CQ5VZ89 1909 aa11.27□□□□□ -0.61
CASC3-210ENST00000584997 NPHP3-ACAD11A0A0J9YXS1 232 aa11.26□□□□□ -0.61
CASC3-210ENST00000584997 VWA3AA6NCI4 1184 aa11.26□□□□□ -0.61
CASC3-210ENST00000584997 K7ENM7 598 aa11.26□□□□□ -0.61
CASC3-210ENST00000584997 PPEF2O14830 753 aa11.26□□□□□ -0.61
CASC3-210ENST00000584997 EXTL3O43909 919 aa11.26□□□□□ -0.61
CASC3-210ENST00000584997 ATG13O75143 517 aa11.26□□□□□ -0.61
CASC3-210ENST00000584997 PLA2G4BP0C869 781 aa11.26□□□□□ -0.61
CASC3-210ENST00000584997 ATF6P18850 670 aa11.26□□□□□ -0.61
CASC3-210ENST00000584997 PAX3P23760 479 aa11.26□□□□□ -0.61
CASC3-210ENST00000584997 WEE1P30291 646 aa11.26□□□□□ -0.61
CASC3-210ENST00000584997 HOXC13P31276 330 aa11.26□□□□□ -0.61
CASC3-210ENST00000584997 AVPR1AP37288 418 aa11.26□□□□□ -0.61
CASC3-210ENST00000584997 PXNP49023 591 aaPredicted RBP11.26□□□□□ -0.61
CASC3-210ENST00000584997 CDR1P51861 262 aa11.26□□□□□ -0.61
CASC3-210ENST00000584997 SLC12A3P55017 1021 aa11.26□□□□□ -0.61
CASC3-210ENST00000584997 NCKAP1LP55160 1127 aa11.26□□□□□ -0.61
CASC3-210ENST00000584997 CCDC6Q16204 474 aa11.26□□□□□ -0.61
CASC3-210ENST00000584997 HYIQ5T013 277 aa11.26□□□□□ -0.61
CASC3-210ENST00000584997 SPATA1Q5VX52 437 aa11.26□□□□□ -0.61
CASC3-210ENST00000584997 MCTP1Q6DN14 999 aa11.26□□□□□ -0.61
CASC3-210ENST00000584997 JADE1Q6IE81 842 aa11.26□□□□□ -0.61
CASC3-210ENST00000584997 CACNA2D4Q7Z3S7 1137 aa11.26□□□□□ -0.61
CASC3-210ENST00000584997 METTL23Q86XA0 190 aa11.26□□□□□ -0.61
CASC3-210ENST00000584997 CD302Q8IX05 232 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms