RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 TRAPPC3O43617 180 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 IFNB1P01574 187 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ITGB3P05106 788 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 TRPC3Q13507 836 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 TCEAL1Q15170 157 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ZKSCAN8Q15776 578 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 AMHR2Q16671 573 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 P3H1Q32P28 736 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ATF7IP2Q5U623 682 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 JADE1Q6IE81 842 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 LRRC34Q8IZ02 419 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 C12orf29Q8N999 325 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 FEZF2Q8TBJ5 459 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 MRPL4Q9BYD3 311 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 CDT1Q9H211 546 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 GINM1Q9NU53 330 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 CPSF3Q9UKF6 684 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 A0A0G2JMZ2 1700 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 LRRC37A2A6NM11 1700 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 TRIP11Q15643 1979 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 LTBP3Q9NS15 1303 aa11.33□□□□□ -0.6
CDK5RAP3-225ENST00000582482 A0A0G2JLL6 359 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 LACTBL1A8MY62 500 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 DKC1O60832 514 aaKnown RBP eCLIP11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 TOM1L1O75674 476 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 TMEM191BP0C7N4 346 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ADCYAP1R1P41586 468 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 CALCOCO2Q13137 446 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 EFTUD2Q15029 972 aaKnown RBP eCLIP11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 MAPK6Q16659 721 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 CCDC142Q17RM4 750 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 IZUMO3Q5VZ72 239 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 DCUN1D2Q6PH85 259 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 RUFY4Q6ZNE9 571 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 PRRT2Q7Z6L0 340 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 USP37Q86T82 979 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 EXOC3L1Q86VI1 746 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ANKMY2Q8IV38 441 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 C1orf127Q8N9H9 656 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ATXN2LQ8WWM7 1075 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 SCLT1Q96NL6 688 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 CPXM1Q96SM3 734 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 C12orf65Q9H3J6 166 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 NINJ2Q9NZG7 142 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 CAPN7Q9Y6W3 813 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ANK1P16157 1881 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 KAT6AQ92794 2004 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 RASGRF2O14827 1237 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ADCY6O43306 1168 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 FAM107AO95990 144 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 PIGRP01833 764 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ERBB2P04626 1255 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 INSRRP14616 1297 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ATF2P15336 505 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 MMP8P22894 467 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ZNF132P52740 706 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 MBTD1Q05BQ5 628 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 MMRN1Q13201 1228 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 GLRA4Q5JXX5 417 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 FAM160B1Q5W0V3 765 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 MAP1SQ66K74 1059 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 PLEKHA7Q6IQ23 1121 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 DNAJC24Q6P3W2 148 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 RHBDF2Q6PJF5 856 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 NPNTQ6UXI9 565 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 FMNL3Q8IVF7 1028 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 UBR7Q8N806 425 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 IPO4Q8TEX9 1081 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 SLITRK1Q96PX8 696 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ANAPC5Q9UJX4 755 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 LOC285556D6RIA3 1793 aa11.32□□□□□ -0.6
CDK5RAP3-225ENST00000582482 OGTO15294 1046 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 SPAG7O75391 227 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 RGS7P49802 495 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 MCCD1P59942 119 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 PLCB3Q01970 1234 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 NFX1Q12986 1120 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 NEDD9Q14511 834 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 CDO1Q16878 200 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 LIN9Q5TKA1 542 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 SLFN12LQ6IEE8 588 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 AFG1LQ8WV93 481 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 XPO6Q96QU8 1125 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 OSBPL7Q9BZF2 842 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ELOVL4Q9GZR5 314 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 IFT122Q9HBG6 1241 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 METTL5Q9NRN9 209 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 MTRF1LQ9UGC7 380 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 AKT3Q9Y243 479 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 NR2E3Q9Y5X4 410 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 SBF1O95248 1867 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 TCRBV7S3A2A0A539 114 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 TMEM191CA6NGB0 347 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 F5H423 210 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 DNM1LO00429 736 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ZC3H11AO75152 810 aaKnown RBP eCLIP11.31□□□□□ -0.66e-7■■■□□ 17.4
CDK5RAP3-225ENST00000582482 ERLIN2O94905 339 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 NUDT17P0C025 328 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 CYP3A5P20815 502 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 DRD4P21917 467 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms