RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 TTPALQ9BTX7 342 aa11.14□□□□□ -0.63
CCDC47-203ENST00000580986 NUP58Q9BVL2 599 aa11.14□□□□□ -0.63
CCDC47-203ENST00000580986 VN1R3Q9BXE9 311 aa11.14□□□□□ -0.63
CCDC47-203ENST00000580986 EDEM3Q9BZQ6 932 aa11.14□□□□□ -0.63
CCDC47-203ENST00000580986 XPO4Q9C0E2 1151 aaKnown RBP11.14□□□□□ -0.63
CCDC47-203ENST00000580986 ZBP1Q9H171 429 aa11.14□□□□□ -0.63
CCDC47-203ENST00000580986 SIX2Q9NPC8 291 aa11.14□□□□□ -0.63
CCDC47-203ENST00000580986 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.14□□□□□ -0.63
CCDC47-203ENST00000580986 IFNKQ9P0W0 207 aa11.14□□□□□ -0.63
CCDC47-203ENST00000580986 MYO6Q9UM54 1294 aa11.14□□□□□ -0.63
CCDC47-203ENST00000580986 CNTN6Q9UQ52 1028 aa11.14□□□□□ -0.63
CCDC47-203ENST00000580986 SNX9Q9Y5X1 595 aa11.14□□□□□ -0.63
CCDC47-203ENST00000580986 NT5C1B-RDH14C9J2C7 533 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 F8W810 466 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 H7C4K7 107 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 TEX33O43247 280 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 TBC1D4O60343 1298 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 UCHL3P15374 230 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 SLC9A1P19634 815 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 WARSP23381 471 aaKnown RBP11.13□□□□□ -0.63
CCDC47-203ENST00000580986 BRCC3P46736 316 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 GLUD2P49448 558 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 YWHAHQ04917 246 aaPredicted RBP11.13□□□□□ -0.63
CCDC47-203ENST00000580986 SYCP1Q15431 976 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 KLHDC7AQ5VTJ3 777 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 FAM171A1Q5VUB5 890 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 KIAA0319Q5VV43 1072 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 SCARA3Q6AZY7 606 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 PHLDB3Q6NSJ2 640 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 DSTYKQ6XUX3 929 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 UNC93AQ86WB7 457 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 ADGRF2Q8IZF7 708 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 PDCL2Q8N4E4 241 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 UBR7Q8N806 425 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 HASPINQ8TF76 798 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 CRACR2AQ9BSW2 395 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 PI4K2AQ9BTU6 479 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 NAA15Q9BXJ9 866 aaKnown RBP11.13□□□□□ -0.63
CCDC47-203ENST00000580986 DNAI2Q9GZS0 605 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 GANQ9H2C0 597 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 ZNF576Q9H609 170 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 NGRNQ9NPE2 291 aaKnown RBP11.13□□□□□ -0.63
CCDC47-203ENST00000580986 TLR9Q9NR96 1032 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 LMCD1Q9NZU5 365 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 FNIP2Q9P278 1114 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 MTRRQ9UBK8 725 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 L1RE1Q9UN81 338 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 BACE2Q9Y5Z0 518 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 CDH23Q9H251 3354 aa11.13□□□□□ -0.63
CCDC47-203ENST00000580986 A0A1W2PQJ5 194 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 GOLGA6L3A6NEY3 463 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 OR6C75A6NL08 312 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 TULP1O00294 542 aaPredicted RBP11.12□□□□□ -0.63
CCDC47-203ENST00000580986 FSCN2O14926 492 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 LILRB3O75022 631 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 NOL4O94818 638 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 URODP06132 367 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 POU3F3P20264 500 aaPredicted RBP11.12□□□□□ -0.63
CCDC47-203ENST00000580986 IGFBP6P24592 240 aaPredicted RBP11.12□□□□□ -0.63
CCDC47-203ENST00000580986 PCSK1P29120 753 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 MFAP3P55082 362 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 SMARCB1Q12824 385 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 TRIM14Q14142 442 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 SPECC1LQ69YQ0 1117 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 OVOS1Q6IE37 1185 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 SPOPLQ6IQ16 392 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 SLC8B1Q6J4K2 584 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 ZNF280DQ6N043 979 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 ADGRD1Q6QNK2 874 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 METTL23Q86XA0 190 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 VPS52Q8N1B4 723 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 TMEM130Q8N3G9 435 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 PPM1KQ8N3J5 372 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 NEK11Q8NG66 645 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 KBTBD7Q8WVZ9 684 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 SHC3Q92529 594 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 RABGGTAQ92696 567 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 TATDN2Q93075 761 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 MMS19Q96T76 1030 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 ACBD6Q9BR61 282 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 TRIM5Q9C035 493 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 TTYH3Q9C0H2 523 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 RXFP1Q9HBX9 757 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 CEP72Q9P209 647 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 NXF1Q9UBU9 619 aaKnown RBP11.12□□□□□ -0.63
CCDC47-203ENST00000580986 MAFFQ9ULX9 164 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 BARX2Q9UMQ3 279 aaPredicted RBP11.12□□□□□ -0.63
CCDC47-203ENST00000580986 STXBP5LQ9Y2K9 1186 aa11.12□□□□□ -0.63
CCDC47-203ENST00000580986 TRIOBPQ9H2D6 2365 aa11.11□□□□□ -0.63
CCDC47-203ENST00000580986 AP5Z1O43299 807 aa11.11□□□□□ -0.63
CCDC47-203ENST00000580986 LRRN2O75325 713 aa11.11□□□□□ -0.63
CCDC47-203ENST00000580986 CILPO75339 1184 aa11.11□□□□□ -0.63
CCDC47-203ENST00000580986 TRIM21P19474 475 aaKnown RBP11.11□□□□□ -0.63
CCDC47-203ENST00000580986 ACO1P21399 889 aaKnown RBP11.11□□□□□ -0.63
CCDC47-203ENST00000580986 TKTP29401 623 aaKnown RBP11.11□□□□□ -0.63
CCDC47-203ENST00000580986 CDC25BP30305 580 aa11.11□□□□□ -0.63
CCDC47-203ENST00000580986 MRE11P49959 708 aa11.11□□□□□ -0.63
CCDC47-203ENST00000580986 GPM6BQ13491 265 aa11.11□□□□□ -0.63
CCDC47-203ENST00000580986 SMC1AQ14683 1233 aaKnown RBP11.11□□□□□ -0.63
CCDC47-203ENST00000580986 PTPN14Q15678 1187 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms