RNA–Protein interactions for RNA: ENST00000580583.5

PPP4R1-217, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-217ENST00000580583 SNX17Q15036 470 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 ZNF394Q53GI3 561 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 C2CD6Q53TS8 623 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 LCE2DQ5TA82 110 aaPredicted RBP6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 MFSD14CQ5VZR4 134 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 LLGL2Q6P1M3 1020 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 TAF2Q6P1X5 1199 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 DENND1BQ6P3S1 775 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 MAATS1Q7Z4T9 603 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 SLC13A5Q86YT5 568 aaPredicted RBP6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 RHOT1Q8IXI2 618 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 MREGQ8N565 214 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 LRRC52Q8N7C0 313 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 C7orf31Q8N865 590 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 C12orf50Q8NA57 414 aaPredicted RBP6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 C3orf20Q8ND61 904 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 BEST2Q8NFU1 509 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 FEZF2Q8TBJ5 459 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 FAM71BQ8TC56 605 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 MAIP1Q8WWC4 291 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 IFT81Q8WYA0 676 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 TFAP2BQ92481 460 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 GDAP1L1Q96MZ0 367 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 MCEEQ96PE7 176 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 RUFY1Q96T51 708 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 MTG1Q9BT17 334 aaPredicted RBP6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 EIF2AQ9BY44 585 aaKnown RBP6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 TRIM7Q9C029 511 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 TRIM6Q9C030 488 aaPredicted RBP6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 ELOVL4Q9GZR5 314 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 SDCBP2Q9H190 292 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 UPF3AQ9H1J1 476 aaKnown RBP6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 NXF3Q9H4D5 531 aaKnown RBP6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 PLEKHA5Q9HAU0 1116 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 ERVK-5Q9HDB9 667 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 FAM114A2Q9NRY5 505 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 CNTN3Q9P232 1028 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 HMGXB4Q9UGU5 601 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 IP6K2Q9UHH9 426 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 AMACRQ9UHK6 382 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 GJD2Q9UKL4 321 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 NFU1Q9UMS0 254 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 AGAP1Q9UPQ3 857 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 PIN4Q9Y237 131 aaKnown RBP6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 EVPLQ92817 2033 aa6.7□□□□□ -1.34
PPP4R1-217ENST00000580583 PDCD11Q14690 1871 aaKnown RBP6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 TCRBV5S1A1TA0A578 114 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 MYADML2A6NDP7 307 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 M0QYV0 167 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 M0QZ92 97 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 O00370 1275 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 TREHO43280 583 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 XPOTO43592 962 aaKnown RBP6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 HSF2BPO75031 334 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 DUSP11O75319 330 aaKnown RBP6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 RECQL4O94761 1208 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 ALDH1A1P00352 501 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 KRT1P04264 644 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 C6orf222P0C671 652 aaPredicted RBP6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 PYGMP11217 842 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 ATF7P17544 494 aaPredicted RBP6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 CTGFP29279 349 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 ECHS1P30084 290 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 HOXA11P31270 313 aaPredicted RBP6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 GBP1P32455 592 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 CRYBB1P53674 252 aaPredicted RBP6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 GSCP56915 257 aaPredicted RBP6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 GJA9P57773 515 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 FAM193AP78312 1265 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 IRX5P78411 483 aaPredicted RBP6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 MRPS6P82932 125 aaKnown RBP6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 CYP1B1Q16678 543 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 GLIPR1L2Q4G1C9 344 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 PTPN20Q4JDL3 420 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 PPP1R15BQ5SWA1 713 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 AADACL2Q6P093 401 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 DCUN1D2Q6PH85 259 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 PAXIP1Q6ZW49 1069 aaPredicted RBP6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 ADAT2Q7Z6V5 191 aaKnown RBP6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 PHLDB2Q86SQ0 1253 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 ERICH1Q86X53 443 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 JAMLQ86YT9 394 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 CCDC50Q8IVM0 306 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 KATNAL2Q8IYT4 538 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 GOLGA6L1Q8N7Z2 621 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 PRELID2Q8N945 189 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 SLC4A11Q8NBS3 891 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 SMC1BQ8NDV3 1235 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 TRPV1Q8NER1 839 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 IPO4Q8TEX9 1081 aaKnown RBP6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 PPP1R13LQ8WUF5 828 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 TMEM40Q8WWA1 233 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 DNAJB3Q8WWF6 145 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 SEC14L1Q92503 715 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 TRIB2Q92519 343 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 DDX27Q96GQ7 796 aaKnown RBP6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 TMEM176AQ96HP8 235 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 HHIPL1Q96JK4 782 aa6.69□□□□□ -1.34
PPP4R1-217ENST00000580583 ZNF560Q96MR9 790 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms