RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 ACKR2O00590 384 aa21.07■□□□□ 0.96
LIMD2-209ENST00000580222 VNN2O95498 520 aa21.07■□□□□ 0.96
LIMD2-209ENST00000580222 MPLP40238 635 aa21.07■□□□□ 0.96
LIMD2-209ENST00000580222 NOVA1P51513 510 aaKnown RBP21.07■□□□□ 0.96
LIMD2-209ENST00000580222 TNK2Q07912 1038 aa21.07■□□□□ 0.96
LIMD2-209ENST00000580222 TMEM132AQ24JP5 1023 aa21.07■□□□□ 0.96
LIMD2-209ENST00000580222 RRAGBQ5VZM2 374 aa21.07■□□□□ 0.96
LIMD2-209ENST00000580222 RNF43Q68DV7 783 aa21.07■□□□□ 0.96
LIMD2-209ENST00000580222 IQCEQ6IPM2 695 aa21.07■□□□□ 0.96
LIMD2-209ENST00000580222 RNF19BQ6ZMZ0 732 aa21.07■□□□□ 0.96
LIMD2-209ENST00000580222 TMEM130Q8N3G9 435 aa21.07■□□□□ 0.96
LIMD2-209ENST00000580222 KCTD17Q8N5Z5 321 aa21.07■□□□□ 0.96
LIMD2-209ENST00000580222 PDILTQ8N807 584 aa21.07■□□□□ 0.96
LIMD2-209ENST00000580222 CEP120Q8N960 986 aa21.07■□□□□ 0.96
LIMD2-209ENST00000580222 FSIP1Q8NA03 581 aa21.07■□□□□ 0.96
LIMD2-209ENST00000580222 UROC1Q96N76 676 aa21.07■□□□□ 0.96
LIMD2-209ENST00000580222 ZMAT2Q96NC0 199 aaKnown RBP21.07■□□□□ 0.96
LIMD2-209ENST00000580222 MKNK1Q9BUB5 465 aa21.07■□□□□ 0.96
LIMD2-209ENST00000580222 KIFC3Q9BVG8 833 aa21.07■□□□□ 0.96
LIMD2-209ENST00000580222 DNM3Q9UQ16 869 aa21.07■□□□□ 0.96
LIMD2-209ENST00000580222 A0A1W2PRU2 124 aa21.06■□□□□ 0.96
LIMD2-209ENST00000580222 ARHGEF35A5YM69 484 aa21.06■□□□□ 0.96
LIMD2-209ENST00000580222 XRCC6P12956 609 aaKnown RBP eCLIP21.06■□□□□ 0.96
LIMD2-209ENST00000580222 PFKFB1P16118 471 aa21.06■□□□□ 0.96
LIMD2-209ENST00000580222 CMA1P23946 247 aa21.06■□□□□ 0.96
LIMD2-209ENST00000580222 STAT6P42226 847 aa21.06■□□□□ 0.96
LIMD2-209ENST00000580222 TPGS2Q68CL5 300 aa21.06■□□□□ 0.96
LIMD2-209ENST00000580222 CCDC73Q6ZRK6 1079 aa21.06■□□□□ 0.96
LIMD2-209ENST00000580222 KCNK18Q7Z418 384 aa21.06■□□□□ 0.96
LIMD2-209ENST00000580222 RALGPS2Q86X27 583 aaPredicted RBP21.06■□□□□ 0.96
LIMD2-209ENST00000580222 TMC8Q8IU68 726 aa21.06■□□□□ 0.96
LIMD2-209ENST00000580222 ARID3BQ8IVW6 561 aaPredicted RBP21.06■□□□□ 0.96
LIMD2-209ENST00000580222 ZBTB8OSQ8IWT0 167 aa21.06■□□□□ 0.96
LIMD2-209ENST00000580222 YAF2Q8IY57 180 aa21.06■□□□□ 0.96
LIMD2-209ENST00000580222 GATA6Q92908 595 aa21.06■□□□□ 0.96
LIMD2-209ENST00000580222 MSANTD3Q96H12 275 aa21.06■□□□□ 0.96
LIMD2-209ENST00000580222 CRISPLD1Q9H336 500 aa21.06■□□□□ 0.96
LIMD2-209ENST00000580222 SLITRK6Q9H5Y7 841 aa21.06■□□□□ 0.96
LIMD2-209ENST00000580222 ASAH2Q9NR71 780 aa21.06■□□□□ 0.96
LIMD2-209ENST00000580222 A0A1B0GVL5 298 aa21.05■□□□□ 0.96
LIMD2-209ENST00000580222 C4orf47A7E2U8 309 aa21.05■□□□□ 0.96
LIMD2-209ENST00000580222 GOLGA6L22H0YM25 854 aa21.05■□□□□ 0.96
LIMD2-209ENST00000580222 PODXLO00592 558 aa21.05■□□□□ 0.96
LIMD2-209ENST00000580222 RING1Q06587 406 aa21.05■□□□□ 0.96
LIMD2-209ENST00000580222 MAPK6Q16659 721 aa21.05■□□□□ 0.96
LIMD2-209ENST00000580222 CTXN3Q4LDR2 81 aa21.05■□□□□ 0.96
LIMD2-209ENST00000580222 LRSAM1Q6UWE0 723 aa21.05■□□□□ 0.96
LIMD2-209ENST00000580222 ALKAL1Q6UXT8 129 aa21.05■□□□□ 0.96
LIMD2-209ENST00000580222 ADPGKQ9BRR6 497 aa21.05■□□□□ 0.96
LIMD2-209ENST00000580222 PANK2Q9BZ23 570 aa21.05■□□□□ 0.96
LIMD2-209ENST00000580222 DNAJC25Q9H1X3 360 aa21.05■□□□□ 0.96
LIMD2-209ENST00000580222 BHMT2Q9H2M3 363 aa21.05■□□□□ 0.96
LIMD2-209ENST00000580222 STK17AQ9UEE5 414 aa21.05■□□□□ 0.96
LIMD2-209ENST00000580222 AFF4Q9UHB7 1163 aaKnown RBP21.05■□□□□ 0.96
LIMD2-209ENST00000580222 LAMA5O15230 3695 aa21.05■□□□□ 0.96
LIMD2-209ENST00000580222 A0A087X0B3 334 aa21.04■□□□□ 0.96
LIMD2-209ENST00000580222 MEFVO15553 781 aaPredicted RBP21.04■□□□□ 0.96
LIMD2-209ENST00000580222 CACNB1Q02641 598 aaPredicted RBP21.04■□□□□ 0.96
LIMD2-209ENST00000580222 ZNF252P-AS1Q0IIN9 211 aa21.04■□□□□ 0.96
LIMD2-209ENST00000580222 PLK5Q496M5 336 aa21.04■□□□□ 0.96
LIMD2-209ENST00000580222 XKR4Q5GH76 650 aa21.04■□□□□ 0.96
LIMD2-209ENST00000580222 ELMOD1Q8N336 334 aa21.04■□□□□ 0.96
LIMD2-209ENST00000580222 LARP4BQ92615 738 aaKnown RBP21.04■□□□□ 0.96
LIMD2-209ENST00000580222 RAD54LQ92698 747 aa21.04■□□□□ 0.96
LIMD2-209ENST00000580222 C18orf25Q96B23 403 aaPredicted RBP21.04■□□□□ 0.96
LIMD2-209ENST00000580222 DHX58Q96C10 678 aa21.04■□□□□ 0.96
LIMD2-209ENST00000580222 ZC3H10Q96K80 434 aaKnown RBP21.04■□□□□ 0.96
LIMD2-209ENST00000580222 PYM1Q9BRP8 204 aaKnown RBP21.04■□□□□ 0.96
LIMD2-209ENST00000580222 ADAM33Q9BZ11 813 aa21.04■□□□□ 0.96
LIMD2-209ENST00000580222 VPS45Q9NRW7 570 aa21.04■□□□□ 0.96
LIMD2-209ENST00000580222 PCDHGA5Q9Y5G8 931 aa21.04■□□□□ 0.96
LIMD2-209ENST00000580222 FREM2Q5SZK8 3169 aa21.04■□□□□ 0.96
LIMD2-209ENST00000580222 GREB1Q4ZG55 1949 aa21.04■□□□□ 0.96
LIMD2-209ENST00000580222 SYN3O14994 580 aa21.03■□□□□ 0.96
LIMD2-209ENST00000580222 DCLK1O15075 740 aa21.03■□□□□ 0.96
LIMD2-209ENST00000580222 PRPF40AO75400 957 aaKnown RBP21.03■□□□□ 0.96
LIMD2-209ENST00000580222 CCDC192P0DO97 292 aa21.03■□□□□ 0.96
LIMD2-209ENST00000580222 C1orf228Q6PIY5 440 aa21.03■□□□□ 0.96
LIMD2-209ENST00000580222 LRRC15Q8TF66 581 aa21.03■□□□□ 0.96
LIMD2-209ENST00000580222 E2F7Q96AV8 911 aa21.03■□□□□ 0.96
LIMD2-209ENST00000580222 CHFRQ96EP1 664 aa21.03■□□□□ 0.96
LIMD2-209ENST00000580222 DUSP15Q9H1R2 295 aaPredicted RBP21.03■□□□□ 0.96
LIMD2-209ENST00000580222 C2orf40Q9H1Z8 148 aa21.03■□□□□ 0.96
LIMD2-209ENST00000580222 GOLPH3LQ9H4A5 285 aa21.03■□□□□ 0.96
LIMD2-209ENST00000580222 BLOC1S4Q9NUP1 217 aa21.03■□□□□ 0.96
LIMD2-209ENST00000580222 YIPF1Q9Y548 306 aa21.03■□□□□ 0.96
LIMD2-209ENST00000580222 GCN1Q92616 2671 aaKnown RBP21.02■□□□□ 0.96
LIMD2-209ENST00000580222 H7C4K7 107 aa21.02■□□□□ 0.96
LIMD2-209ENST00000580222 POLR2DO15514 142 aaKnown RBP21.02■□□□□ 0.96
LIMD2-209ENST00000580222 GADD45BO75293 160 aaPredicted RBP21.02■□□□□ 0.96
LIMD2-209ENST00000580222 PLA2G4BP0C869 781 aa21.02■□□□□ 0.96
LIMD2-209ENST00000580222 OSTNP61366 133 aa21.02■□□□□ 0.96
LIMD2-209ENST00000580222 DHX8Q14562 1220 aaKnown RBP21.02■□□□□ 0.96
LIMD2-209ENST00000580222 DCAF4L1Q3SXM0 396 aa21.02■□□□□ 0.96
LIMD2-209ENST00000580222 SH3PXD2AQ5TCZ1 1133 aa21.02■□□□□ 0.96
LIMD2-209ENST00000580222 ATF7IP2Q5U623 682 aa21.02■□□□□ 0.96
LIMD2-209ENST00000580222 GAREM2Q75VX8 874 aa21.02■□□□□ 0.96
LIMD2-209ENST00000580222 SYNPOQ8N3V7 929 aa21.02■□□□□ 0.96
LIMD2-209ENST00000580222 LEMD2Q8NC56 503 aa21.02■□□□□ 0.96
LIMD2-209ENST00000580222 EDEM2Q9BV94 578 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms