RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 KRT13P13646 458 aa18.79■□□□□ 0.6
ITGB4-205ENST00000579211 CASP4P49662 377 aa18.79■□□□□ 0.6
ITGB4-205ENST00000579211 UBE2HP62256 183 aa18.79■□□□□ 0.6
ITGB4-205ENST00000579211 NTHL1P78549 312 aa18.79■□□□□ 0.6
ITGB4-205ENST00000579211 TWF1Q12792 350 aa18.79■□□□□ 0.6
ITGB4-205ENST00000579211 DUSP4Q13115 394 aa18.79■□□□□ 0.6
ITGB4-205ENST00000579211 ADAM9Q13443 819 aa18.79■□□□□ 0.6
ITGB4-205ENST00000579211 ISM2Q6H9L7 571 aa18.79■□□□□ 0.6
ITGB4-205ENST00000579211 CORO1BQ9BR76 489 aa18.79■□□□□ 0.6
ITGB4-205ENST00000579211 GDAP2Q9NXN4 497 aa18.79■□□□□ 0.6
ITGB4-205ENST00000579211 DDX43Q9NXZ2 648 aaKnown RBP18.79■□□□□ 0.6
ITGB4-205ENST00000579211 MUC3AQ02505 3323 aa18.79■□□□□ 0.6
ITGB4-205ENST00000579211 LHX1P48742 406 aa18.78■□□□□ 0.6
ITGB4-205ENST00000579211 EPHB3P54753 998 aa18.78■□□□□ 0.6
ITGB4-205ENST00000579211 TNNC1P63316 161 aa18.78■□□□□ 0.6
ITGB4-205ENST00000579211 PTPN21Q16825 1174 aa18.78■□□□□ 0.6
ITGB4-205ENST00000579211 TMEM31Q5JXX7 168 aa18.78■□□□□ 0.6
ITGB4-205ENST00000579211 CYP4A22Q5TCH4 519 aa18.78■□□□□ 0.6
ITGB4-205ENST00000579211 ELOA2Q8IYF1 753 aaPredicted RBP18.78■□□□□ 0.6
ITGB4-205ENST00000579211 PDCL2Q8N4E4 241 aa18.78■□□□□ 0.6
ITGB4-205ENST00000579211 TOP6BLQ8N6T0 577 aa18.78■□□□□ 0.6
ITGB4-205ENST00000579211 FAM200AQ8TCP9 573 aa18.78■□□□□ 0.6
ITGB4-205ENST00000579211 PARD3BQ8TEW8 1205 aa18.78■□□□□ 0.6
ITGB4-205ENST00000579211 TMEM209Q96SK2 561 aa18.78■□□□□ 0.6
ITGB4-205ENST00000579211 ZCWPW1Q9H0M4 648 aa18.78■□□□□ 0.6
ITGB4-205ENST00000579211 HCFC1R1Q9NWW0 138 aa18.78■□□□□ 0.6
ITGB4-205ENST00000579211 DNMT3BQ9UBC3 853 aaKnown RBP18.78■□□□□ 0.6
ITGB4-205ENST00000579211 L1RE1Q9UN81 338 aa18.78■□□□□ 0.6
ITGB4-205ENST00000579211 SLC27A5Q9Y2P5 690 aa18.78■□□□□ 0.6
ITGB4-205ENST00000579211 MRPS23Q9Y3D9 190 aaKnown RBP18.78■□□□□ 0.6
ITGB4-205ENST00000579211 MTMR11A4FU01 709 aa18.77■□□□□ 0.6
ITGB4-205ENST00000579211 LRRIQ3A6PVS8 624 aaPredicted RBP18.77■□□□□ 0.6
ITGB4-205ENST00000579211 PAPLNO95428 1278 aa18.77■□□□□ 0.6
ITGB4-205ENST00000579211 CST3P01034 146 aaPredicted RBP18.77■□□□□ 0.6
ITGB4-205ENST00000579211 POU2F2P09086 479 aa18.77■□□□□ 0.6
ITGB4-205ENST00000579211 PSMC2P35998 433 aaKnown RBP18.77■□□□□ 0.6
ITGB4-205ENST00000579211 PRCPP42785 496 aa18.77■□□□□ 0.6
ITGB4-205ENST00000579211 SMARCB1Q12824 385 aa18.77■□□□□ 0.6
ITGB4-205ENST00000579211 MTMR3Q13615 1198 aa18.77■□□□□ 0.6
ITGB4-205ENST00000579211 CENPPQ6IPU0 288 aa18.77■□□□□ 0.6
ITGB4-205ENST00000579211 DPH6Q7L8W6 267 aa18.77■□□□□ 0.6
ITGB4-205ENST00000579211 FAM186BQ8IYM0 893 aa18.77■□□□□ 0.6
ITGB4-205ENST00000579211 ADGRF2Q8IZF7 708 aa18.77■□□□□ 0.6
ITGB4-205ENST00000579211 OR10T2Q8NGX3 314 aa18.77■□□□□ 0.6
ITGB4-205ENST00000579211 CXorf38Q8TB03 319 aa18.77■□□□□ 0.6
ITGB4-205ENST00000579211 C2orf15Q8WU43 125 aaKnown RBP18.77■□□□□ 0.6
ITGB4-205ENST00000579211 TMEM174Q8WUU8 243 aa18.77■□□□□ 0.6
ITGB4-205ENST00000579211 ZNF516Q92618 1163 aa18.77■□□□□ 0.6
ITGB4-205ENST00000579211 EDAQ92838 391 aa18.77■□□□□ 0.6
ITGB4-205ENST00000579211 SYAP1Q96A49 352 aaPredicted RBP18.77■□□□□ 0.6
ITGB4-205ENST00000579211 SEPT5Q99719 369 aaPredicted RBP18.77■□□□□ 0.6
ITGB4-205ENST00000579211 SORCS3Q9UPU3 1222 aa18.77■□□□□ 0.6
ITGB4-205ENST00000579211 ZFP37Q9Y6Q3 630 aaPredicted RBP18.77■□□□□ 0.6
ITGB4-205ENST00000579211 TRIOO75962 3097 aa18.77■□□□□ 0.59
ITGB4-205ENST00000579211 DENND4CQ5VZ89 1909 aa18.76■□□□□ 0.59
ITGB4-205ENST00000579211 FAM86C2PA6NEL3 165 aa18.76■□□□□ 0.59
ITGB4-205ENST00000579211 ZNF197O14709 1029 aa18.76■□□□□ 0.59
ITGB4-205ENST00000579211 CETN3O15182 167 aa18.76■□□□□ 0.59
ITGB4-205ENST00000579211 ASGR2P07307 311 aa18.76■□□□□ 0.59
ITGB4-205ENST00000579211 RHOP08100 348 aa18.76■□□□□ 0.59
ITGB4-205ENST00000579211 ATICP31939 592 aa18.76■□□□□ 0.59
ITGB4-205ENST00000579211 TUFMP49411 452 aaKnown RBP18.76■□□□□ 0.59
ITGB4-205ENST00000579211 VAMP7P51809 220 aa18.76■□□□□ 0.59
ITGB4-205ENST00000579211 CDR1P51861 262 aa18.76■□□□□ 0.59
ITGB4-205ENST00000579211 ZXDAP98168 799 aa18.76■□□□□ 0.59
ITGB4-205ENST00000579211 TAF12Q16514 161 aa18.76■□□□□ 0.59
ITGB4-205ENST00000579211 NFIL3Q16649 462 aa18.76■□□□□ 0.59
ITGB4-205ENST00000579211 WDR72Q3MJ13 1102 aa18.76■□□□□ 0.59
ITGB4-205ENST00000579211 MGAT5BQ3V5L5 792 aa18.76■□□□□ 0.59
ITGB4-205ENST00000579211 SCARA3Q6AZY7 606 aa18.76■□□□□ 0.59
ITGB4-205ENST00000579211 INTS8Q75QN2 995 aaKnown RBP18.76■□□□□ 0.59
ITGB4-205ENST00000579211 PDZD4Q76G19 769 aaPredicted RBP18.76■□□□□ 0.59
ITGB4-205ENST00000579211 ATAD1Q8NBU5 361 aa18.76■□□□□ 0.59
ITGB4-205ENST00000579211 TMC2Q8TDI7 906 aa18.76■□□□□ 0.59
ITGB4-205ENST00000579211 MYADMQ96S97 322 aa18.76■□□□□ 0.59
ITGB4-205ENST00000579211 ACBD6Q9BR61 282 aa18.76■□□□□ 0.59
ITGB4-205ENST00000579211 SNX25Q9H3E2 840 aa18.76■□□□□ 0.59
ITGB4-205ENST00000579211 ABI2Q9NYB9 513 aaPredicted RBP18.76■□□□□ 0.59
ITGB4-205ENST00000579211 IGSF9Q9P2J2 1179 aa18.76■□□□□ 0.59
ITGB4-205ENST00000579211 YIPF1Q9Y548 306 aa18.76■□□□□ 0.59
ITGB4-205ENST00000579211 MAPK13O15264 365 aa18.75■□□□□ 0.59
ITGB4-205ENST00000579211 MYL4P12829 197 aa18.75■□□□□ 0.59
ITGB4-205ENST00000579211 LAMP2P13473 410 aa18.75■□□□□ 0.59
ITGB4-205ENST00000579211 ACAT1P24752 427 aaKnown RBP18.75■□□□□ 0.59
ITGB4-205ENST00000579211 PCSK1P29120 753 aa18.75■□□□□ 0.59
ITGB4-205ENST00000579211 PPP1R2P41236 205 aa18.75■□□□□ 0.59
ITGB4-205ENST00000579211 MYL6P60660 151 aa18.75■□□□□ 0.59
ITGB4-205ENST00000579211 DLG4P78352 724 aa18.75■□□□□ 0.59
ITGB4-205ENST00000579211 NFE2Q16621 373 aaPredicted RBP18.75■□□□□ 0.59
ITGB4-205ENST00000579211 SOWAHAQ2M3V2 549 aa18.75■□□□□ 0.59
ITGB4-205ENST00000579211 EDRF1Q3B7T1 1238 aa18.75■□□□□ 0.59
ITGB4-205ENST00000579211 SPATA18Q8TC71 538 aa18.75■□□□□ 0.59
ITGB4-205ENST00000579211 SPPL2BQ8TCT7 592 aa18.75■□□□□ 0.59
ITGB4-205ENST00000579211 ING5Q8WYH8 240 aa18.75■□□□□ 0.59
ITGB4-205ENST00000579211 RTP3Q9BQQ7 232 aa18.75■□□□□ 0.59
ITGB4-205ENST00000579211 MMRN2Q9H8L6 949 aa18.75■□□□□ 0.59
ITGB4-205ENST00000579211 ASAH2Q9NR71 780 aa18.75■□□□□ 0.59
ITGB4-205ENST00000579211 NXF1Q9UBU9 619 aaKnown RBP18.75■□□□□ 0.59
ITGB4-205ENST00000579211 CDH7Q9ULB5 785 aa18.75■□□□□ 0.59
ITGB4-205ENST00000579211 PCDHB5Q9Y5E4 795 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms