RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 ATF7P17544 494 aaPredicted RBP18.05■□□□□ 0.48
SREBF1-218ENST00000578469 THPOP40225 353 aa18.05■□□□□ 0.48
SREBF1-218ENST00000578469 PAFAH1B1P43034 410 aa18.05■□□□□ 0.48
SREBF1-218ENST00000578469 NSFP46459 744 aaKnown RBP18.05■□□□□ 0.48
SREBF1-218ENST00000578469 CCDC181Q5TID7 509 aa18.05■□□□□ 0.48
SREBF1-218ENST00000578469 PEX26Q7Z412 305 aa18.05■□□□□ 0.48
SREBF1-218ENST00000578469 SLFN11Q7Z7L1 901 aa18.05■□□□□ 0.48
SREBF1-218ENST00000578469 DAAM2Q86T65 1068 aa18.05■□□□□ 0.48
SREBF1-218ENST00000578469 LRRC57Q8N9N7 239 aa18.05■□□□□ 0.48
SREBF1-218ENST00000578469 CXorf38Q8TB03 319 aa18.05■□□□□ 0.48
SREBF1-218ENST00000578469 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.05■□□□□ 0.48
SREBF1-218ENST00000578469 AMFRQ9UKV5 643 aa18.05■□□□□ 0.48
SREBF1-218ENST00000578469 ST3GAL5Q9UNP4 418 aa18.05■□□□□ 0.48
SREBF1-218ENST00000578469 V9GYY5 206 aaPredicted RBP18.05■□□□□ 0.48
SREBF1-218ENST00000578469 GRIN2DO15399 1336 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 TNFRSF10AO00220 468 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 MED7O43513 233 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 NCK2O43639 380 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 SRGAP2O75044 1071 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 MTA2O94776 668 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 CYP1A2P05177 515 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 PAEPP09466 180 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 KCNE1P15382 129 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 ZSCAN20P17040 1043 aaPredicted RBP18.04■□□□□ 0.48
SREBF1-218ENST00000578469 MGAT3Q09327 533 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 NFX1Q12986 1120 aaKnown RBP18.04■□□□□ 0.48
SREBF1-218ENST00000578469 ZBTB6Q15916 424 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 TEX35Q5T0J7 233 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 LIN9Q5TKA1 542 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 MFSD5Q6N075 450 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 PSRC1Q6PGN9 363 aaPredicted RBP18.04■□□□□ 0.48
SREBF1-218ENST00000578469 ALKAL1Q6UXT8 129 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 LRRC52Q8N7C0 313 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 LRRN4CLQ8ND94 238 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 ZNF606Q8WXB4 792 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 TSC1Q92574 1164 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 CAPZA3Q96KX2 299 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 UVRAGQ9P2Y5 699 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 TBX21Q9UL17 535 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 HES2Q9Y543 173 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 IPPQ9Y573 584 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 CEP83Q9Y592 693 aa18.04■□□□□ 0.48
SREBF1-218ENST00000578469 CES2O00748 559 aa18.03■□□□□ 0.48
SREBF1-218ENST00000578469 CAND2O75155 1236 aa18.03■□□□□ 0.48
SREBF1-218ENST00000578469 KIF4AO95239 1232 aa18.03■□□□□ 0.48
SREBF1-218ENST00000578469 LSM8O95777 96 aaKnown RBP18.03■□□□□ 0.48
SREBF1-218ENST00000578469 CALCAP01258 141 aa18.03■□□□□ 0.48
SREBF1-218ENST00000578469 CHRNA1P02708 482 aa18.03■□□□□ 0.48
SREBF1-218ENST00000578469 AKAP5P24588 427 aa18.03■□□□□ 0.48
SREBF1-218ENST00000578469 GUCY2FP51841 1108 aa18.03■□□□□ 0.48
SREBF1-218ENST00000578469 CENPCQ03188 943 aa18.03■□□□□ 0.48
SREBF1-218ENST00000578469 ERCC6LQ2NKX8 1250 aa18.03■□□□□ 0.48
SREBF1-218ENST00000578469 XKR4Q5GH76 650 aa18.03■□□□□ 0.48
SREBF1-218ENST00000578469 NAA35Q5VZE5 725 aa18.03■□□□□ 0.48
SREBF1-218ENST00000578469 RSRC2Q7L4I2 434 aaKnown RBP18.03■□□□□ 0.48
SREBF1-218ENST00000578469 TMEM199Q8N511 208 aa18.03■□□□□ 0.48
SREBF1-218ENST00000578469 RABGGTAQ92696 567 aa18.03■□□□□ 0.48
SREBF1-218ENST00000578469 CYFIP2Q96F07 1278 aa18.03■□□□□ 0.48
SREBF1-218ENST00000578469 VCPIP1Q96JH7 1222 aa18.03■□□□□ 0.48
SREBF1-218ENST00000578469 PBKQ96KB5 322 aa18.03■□□□□ 0.48
SREBF1-218ENST00000578469 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.03■□□□□ 0.488e-15■■■■■ 27
SREBF1-218ENST00000578469 SELENOOQ9BVL4 669 aa18.03■□□□□ 0.48
SREBF1-218ENST00000578469 MTIF3Q9H2K0 278 aaKnown RBP18.03■□□□□ 0.48
SREBF1-218ENST00000578469 OSGEPQ9NPF4 335 aa18.03■□□□□ 0.48
SREBF1-218ENST00000578469 AVENQ9NQS1 362 aaPredicted RBP18.03■□□□□ 0.48
SREBF1-218ENST00000578469 CNOT8Q9UFF9 292 aaKnown RBP18.03■□□□□ 0.48
SREBF1-218ENST00000578469 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.03■□□□□ 0.48
SREBF1-218ENST00000578469 RALGAPA2Q2PPJ7 1873 aa18.03■□□□□ 0.48
SREBF1-218ENST00000578469 CITO14578 2027 aa18.03■□□□□ 0.48
SREBF1-218ENST00000578469 A0A0U1RQG5 324 aaPredicted RBP18.02■□□□□ 0.48
SREBF1-218ENST00000578469 BUB1BO60566 1050 aaPredicted RBP18.02■□□□□ 0.48
SREBF1-218ENST00000578469 CYP3A5P20815 502 aa18.02■□□□□ 0.48
SREBF1-218ENST00000578469 NOMO3P69849 1222 aa18.02■□□□□ 0.48
SREBF1-218ENST00000578469 ELF2Q15723 593 aa18.02■□□□□ 0.48
SREBF1-218ENST00000578469 CFAP221Q4G0U5 840 aa18.02■□□□□ 0.48
SREBF1-218ENST00000578469 ZNF394Q53GI3 561 aa18.02■□□□□ 0.48
SREBF1-218ENST00000578469 FAM26DQ5JW98 314 aa18.02■□□□□ 0.48
SREBF1-218ENST00000578469 C11orf63Q6NUN7 778 aa18.02■□□□□ 0.48
SREBF1-218ENST00000578469 MCOLN2Q8IZK6 566 aa18.02■□□□□ 0.48
SREBF1-218ENST00000578469 USP38Q8NB14 1042 aa18.02■□□□□ 0.48
SREBF1-218ENST00000578469 TMEM35BQ8NCS4 154 aa18.02■□□□□ 0.48
SREBF1-218ENST00000578469 CPA5Q8WXQ8 436 aa18.02■□□□□ 0.48
SREBF1-218ENST00000578469 WNT8BQ93098 351 aa18.02■□□□□ 0.48
SREBF1-218ENST00000578469 ZNF560Q96MR9 790 aa18.02■□□□□ 0.48
SREBF1-218ENST00000578469 ZMAT2Q96NC0 199 aaKnown RBP18.02■□□□□ 0.48
SREBF1-218ENST00000578469 MMS19Q96T76 1030 aa18.02■□□□□ 0.48
SREBF1-218ENST00000578469 SEZ6LQ9BYH1 1024 aa18.02■□□□□ 0.48
SREBF1-218ENST00000578469 ZNF518BQ9C0D4 1074 aa18.02■□□□□ 0.48
SREBF1-218ENST00000578469 DNAI2Q9GZS0 605 aa18.02■□□□□ 0.48
SREBF1-218ENST00000578469 PCDHGC3Q9UN70 934 aa18.02■□□□□ 0.48
SREBF1-218ENST00000578469 MYH10P35580 1976 aa18.01■□□□□ 0.47
SREBF1-218ENST00000578469 SMIM28A0A1B0GU29 152 aa18.01■□□□□ 0.47
SREBF1-218ENST00000578469 ZNF185O15231 689 aa18.01■□□□□ 0.47
SREBF1-218ENST00000578469 ITGA4P13612 1032 aa18.01■□□□□ 0.47
SREBF1-218ENST00000578469 CD19P15391 556 aa18.01■□□□□ 0.47
SREBF1-218ENST00000578469 BRD2P25440 801 aaKnown RBP18.01■□□□□ 0.47
SREBF1-218ENST00000578469 PNPLA4P41247 253 aa18.01■□□□□ 0.47
SREBF1-218ENST00000578469 RAP1GAPP47736 663 aa18.01■□□□□ 0.47
SREBF1-218ENST00000578469 CDH8P55286 799 aa18.01■□□□□ 0.47
SREBF1-218ENST00000578469 PAK2Q13177 524 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms