RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 NOD2Q9HC29 1040 aa14.67□□□□□ -0.06
RNF43-202ENST00000577625 SMIM35A0A1B0GVV1 85 aa14.67□□□□□ -0.06
RNF43-202ENST00000577625 LIN7AO14910 233 aaPredicted RBP14.67□□□□□ -0.06
RNF43-202ENST00000577625 SMNDC1O75940 238 aaKnown RBP eCLIP14.67□□□□□ -0.065e-6■□□□□ 10.8
RNF43-202ENST00000577625 ALDH1A1P00352 501 aa14.67□□□□□ -0.06
RNF43-202ENST00000577625 ASS1P00966 412 aaKnown RBP14.67□□□□□ -0.06
RNF43-202ENST00000577625 CST3P01034 146 aaPredicted RBP14.67□□□□□ -0.06
RNF43-202ENST00000577625 MMEP08473 750 aa14.67□□□□□ -0.06
RNF43-202ENST00000577625 ACO1P21399 889 aaKnown RBP14.67□□□□□ -0.06
RNF43-202ENST00000577625 TBXAS1P24557 533 aaPredicted RBP14.67□□□□□ -0.06
RNF43-202ENST00000577625 PAFAH1B1P43034 410 aa14.67□□□□□ -0.06
RNF43-202ENST00000577625 TMEM62Q0P6H9 643 aa14.67□□□□□ -0.06
RNF43-202ENST00000577625 RPS6KA1Q15418 735 aa14.67□□□□□ -0.06
RNF43-202ENST00000577625 DUOXA2Q1HG44 320 aa14.67□□□□□ -0.06
RNF43-202ENST00000577625 CCDC181Q5TID7 509 aa14.67□□□□□ -0.06
RNF43-202ENST00000577625 HOMEZQ8IX15 550 aa14.67□□□□□ -0.06
RNF43-202ENST00000577625 RHOT2Q8IXI1 618 aa14.67□□□□□ -0.06
RNF43-202ENST00000577625 CCHCR1Q8TD31 782 aa14.67□□□□□ -0.06
RNF43-202ENST00000577625 ARHGEF26Q96DR7 871 aa14.67□□□□□ -0.06
RNF43-202ENST00000577625 THOC1Q96FV9 657 aaKnown RBP14.67□□□□□ -0.06
RNF43-202ENST00000577625 RPF1Q9H9Y2 349 aaKnown RBP14.67□□□□□ -0.06
RNF43-202ENST00000577625 OSGEPQ9NPF4 335 aa14.67□□□□□ -0.06
RNF43-202ENST00000577625 CORO1CQ9ULV4 474 aaPredicted RBP14.67□□□□□ -0.06
RNF43-202ENST00000577625 PACSIN2Q9UNF0 486 aaPredicted RBP14.67□□□□□ -0.06
RNF43-202ENST00000577625 PDCD11Q14690 1871 aaKnown RBP14.66□□□□□ -0.06
RNF43-202ENST00000577625 FAM170AA1A519 330 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 HMGB1P1B2RPK0 211 aaPredicted RBP14.66□□□□□ -0.06
RNF43-202ENST00000577625 AOC2O75106 756 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 GPR32O75388 356 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 KIF4AO95239 1232 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 IL18RAPO95256 599 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 STAG3L1P0CL83 205 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 GHRP10912 638 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 CAP1Q01518 475 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 NOGQ13253 232 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 CFAP221Q4G0U5 840 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 SPATA4Q8NEY3 305 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 IMPG2Q9BZV3 1241 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 C15orf41Q9Y2V0 281 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 MYADML2A6NDP7 307 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 ENO4A6NNW6 628 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 AHCYL1O43865 530 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 CAND2O75155 1236 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 CALCAP01258 141 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 KRT14P02533 472 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 TMEM191BP0C7N4 346 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 CYP2C9P11712 490 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 FGFR4P22455 802 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 FLT3LGP49771 235 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 BPIFB4P59827 614 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 GPC5P78333 572 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 TFAMQ00059 246 aaKnown RBP14.66□□□□□ -0.06
RNF43-202ENST00000577625 PURAQ00577 322 aaKnown RBP14.66□□□□□ -0.06
RNF43-202ENST00000577625 CFAP58Q5T655 872 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 PEX26Q7Z412 305 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 DAAM2Q86T65 1068 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 ZNF677Q86XU0 584 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 IQCKQ8N0W5 287 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 ARFGAP2Q8N6H7 521 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 TAF4BQ92750 862 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 PAIP2Q9BPZ3 127 aaKnown RBP14.66□□□□□ -0.06
RNF43-202ENST00000577625 LRRC1Q9BTT6 524 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 GOLPH3Q9H4A6 298 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 STXBP5LQ9Y2K9 1186 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 PCDHB2Q9Y5E7 798 aa14.66□□□□□ -0.06
RNF43-202ENST00000577625 DUSP11O75319 330 aaKnown RBP14.65□□□□□ -0.06
RNF43-202ENST00000577625 FESP07332 822 aa14.65□□□□□ -0.06
RNF43-202ENST00000577625 HOXC8P31273 242 aa14.65□□□□□ -0.06
RNF43-202ENST00000577625 MYL6P60660 151 aa14.65□□□□□ -0.06
RNF43-202ENST00000577625 ELF3P78545 371 aaPredicted RBP14.65□□□□□ -0.06
RNF43-202ENST00000577625 POU5F1Q01860 360 aaKnown RBP14.65□□□□□ -0.06
RNF43-202ENST00000577625 NT5DC3Q86UY8 548 aa14.65□□□□□ -0.06
RNF43-202ENST00000577625 DRAXINQ8NBI3 349 aaPredicted RBP14.65□□□□□ -0.06
RNF43-202ENST00000577625 KATNAL1Q9BW62 490 aa14.65□□□□□ -0.06
RNF43-202ENST00000577625 CDHR5Q9HBB8 845 aa14.65□□□□□ -0.06
RNF43-202ENST00000577625 DMGDHQ9UI17 866 aaKnown RBP14.65□□□□□ -0.06
RNF43-202ENST00000577625 CNTN6Q9UQ52 1028 aa14.65□□□□□ -0.06
RNF43-202ENST00000577625 GMNCA6NCL1 334 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 LACTBL1A8MY62 500 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 TREHO43280 583 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 NFICP08651 508 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 ZNF200P98182 395 aaPredicted RBP14.64□□□□□ -0.07
RNF43-202ENST00000577625 CDC42EP1Q00587 391 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 PRKCZQ05513 592 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 MYO1EQ12965 1108 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 RIPK1Q13546 671 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 MFSD14CQ5VZR4 134 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 UBR7Q8N806 425 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 HDAC7Q8WUI4 952 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 ANKRD36BP1Q96IX9 119 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 ATP6V1G3Q96LB4 118 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 KDM4CQ9H3R0 1056 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 EHD2Q9NZN4 543 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 STIM2Q9P246 746 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 COG5Q9UP83 839 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 GINS2Q9Y248 185 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 TOMM70O94826 608 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 TNNC2P02585 160 aa14.64□□□□□ -0.07
RNF43-202ENST00000577625 C6orf222P0C671 652 aaPredicted RBP14.64□□□□□ -0.07
RNF43-202ENST00000577625 NEFHP12036 1026 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms