RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 AFMIDQ63HM1 303 aa3.41□□□□□ -1.86
TOP2A-202ENST00000577541 MRPL10Q7Z7H8 261 aaKnown RBP3.41□□□□□ -1.86
TOP2A-202ENST00000577541 DDX42Q86XP3 938 aaKnown RBP eCLIP3.41□□□□□ -1.86
TOP2A-202ENST00000577541 FOXP4Q8IVH2 680 aaPredicted RBP3.41□□□□□ -1.86
TOP2A-202ENST00000577541 PQLC1Q8N2U9 271 aa3.41□□□□□ -1.86
TOP2A-202ENST00000577541 NANOGP1Q8N7R0 232 aa3.41□□□□□ -1.86
TOP2A-202ENST00000577541 SLC30A5Q8TAD4 765 aa3.41□□□□□ -1.86
TOP2A-202ENST00000577541 COG1Q8WTW3 980 aa3.41□□□□□ -1.86
TOP2A-202ENST00000577541 LPIN2Q92539 896 aa3.41□□□□□ -1.86
TOP2A-202ENST00000577541 MARS2Q96GW9 593 aaKnown RBP3.41□□□□□ -1.86
TOP2A-202ENST00000577541 VCPIP1Q96JH7 1222 aa3.41□□□□□ -1.86
TOP2A-202ENST00000577541 MED15Q96RN5 788 aa3.41□□□□□ -1.86
TOP2A-202ENST00000577541 HIPK2Q9H2X6 1198 aa3.41□□□□□ -1.86
TOP2A-202ENST00000577541 INTS13Q9NVM9 706 aa3.41□□□□□ -1.86
TOP2A-202ENST00000577541 DNAJC28Q9NX36 388 aa3.41□□□□□ -1.86
TOP2A-202ENST00000577541 SLC23A1Q9UHI7 598 aa3.41□□□□□ -1.86
TOP2A-202ENST00000577541 VWC2LB2RUY7 222 aa3.4□□□□□ -1.87
TOP2A-202ENST00000577541 TISP43B9A030 160 aa3.4□□□□□ -1.87
TOP2A-202ENST00000577541 SGTAO43765 313 aa3.4□□□□□ -1.87
TOP2A-202ENST00000577541 AMY1AP04745 511 aa3.4□□□□□ -1.87
TOP2A-202ENST00000577541 CNGA1P29973 690 aa3.4□□□□□ -1.87
TOP2A-202ENST00000577541 ADSLP30566 484 aaPredicted RBP3.4□□□□□ -1.87
TOP2A-202ENST00000577541 ALDH1A3P47895 512 aa3.4□□□□□ -1.87
TOP2A-202ENST00000577541 HILS1P60008 231 aa3.4□□□□□ -1.87
TOP2A-202ENST00000577541 TWIST1Q15672 202 aa3.4□□□□□ -1.87
TOP2A-202ENST00000577541 CNTD1Q8N815 330 aa3.4□□□□□ -1.87
TOP2A-202ENST00000577541 C1orf162Q8NEQ5 155 aaPredicted RBP3.4□□□□□ -1.87
TOP2A-202ENST00000577541 OR2I1PQ8NGU4 316 aa3.4□□□□□ -1.87
TOP2A-202ENST00000577541 PNKPQ96T60 521 aa3.4□□□□□ -1.87
TOP2A-202ENST00000577541 MRI1Q9BV20 369 aa3.4□□□□□ -1.87
TOP2A-202ENST00000577541 ADI1Q9BV57 179 aa3.4□□□□□ -1.87
TOP2A-202ENST00000577541 MANSC1Q9H8J5 431 aa3.4□□□□□ -1.87
TOP2A-202ENST00000577541 DMRT3Q9NQL9 472 aa3.4□□□□□ -1.87
TOP2A-202ENST00000577541 TMEM140Q9NV12 185 aa3.4□□□□□ -1.87
TOP2A-202ENST00000577541 IGSF3O75054 1194 aa3.39□□□□□ -1.87
TOP2A-202ENST00000577541 TTLL1O95922 423 aa3.39□□□□□ -1.87
TOP2A-202ENST00000577541 ATP5JP18859 108 aa3.39□□□□□ -1.87
TOP2A-202ENST00000577541 FPR1P21462 350 aa3.39□□□□□ -1.87
TOP2A-202ENST00000577541 PCSK1P29120 753 aa3.39□□□□□ -1.87
TOP2A-202ENST00000577541 CCT2P78371 535 aaKnown RBP3.39□□□□□ -1.87
TOP2A-202ENST00000577541 RHDQ02161 417 aa3.39□□□□□ -1.87
TOP2A-202ENST00000577541 DAZAP2Q15038 168 aaPredicted RBP3.39□□□□□ -1.87
TOP2A-202ENST00000577541 CNGA4Q8IV77 575 aa3.39□□□□□ -1.87
TOP2A-202ENST00000577541 ATL2Q8NHH9 583 aa3.39□□□□□ -1.87
TOP2A-202ENST00000577541 PRSS3P2Q8NHM4 247 aa3.39□□□□□ -1.87
TOP2A-202ENST00000577541 NR4A3Q92570 626 aa3.39□□□□□ -1.87
TOP2A-202ENST00000577541 SENP6Q9GZR1 1112 aaPredicted RBP3.39□□□□□ -1.87
TOP2A-202ENST00000577541 TRNAU1APQ9NX07 287 aaKnown RBP3.39□□□□□ -1.87
TOP2A-202ENST00000577541 SLC5A4Q9NY91 659 aa3.39□□□□□ -1.87
TOP2A-202ENST00000577541 CD8B2A6NJW9 211 aa3.38□□□□□ -1.87
TOP2A-202ENST00000577541 PRRT4C9JH25 899 aa3.38□□□□□ -1.87
TOP2A-202ENST00000577541 GPR32O75388 356 aa3.38□□□□□ -1.87
TOP2A-202ENST00000577541 OSMP13725 252 aa3.38□□□□□ -1.87
TOP2A-202ENST00000577541 GSPT1P15170 499 aaKnown RBP3.38□□□□□ -1.87
TOP2A-202ENST00000577541 DRD4P21917 467 aa3.38□□□□□ -1.87
TOP2A-202ENST00000577541 GATA3P23771 443 aa3.38□□□□□ -1.87
TOP2A-202ENST00000577541 ARHGAP25P42331 645 aa3.38□□□□□ -1.87
TOP2A-202ENST00000577541 HTR6P50406 440 aa3.38□□□□□ -1.87
TOP2A-202ENST00000577541 CCT8P50990 548 aa3.38□□□□□ -1.87
TOP2A-202ENST00000577541 CTXN1P60606 82 aa3.38□□□□□ -1.87
TOP2A-202ENST00000577541 CDC42EP1Q00587 391 aa3.38□□□□□ -1.87
TOP2A-202ENST00000577541 AMPD3Q01432 767 aa3.38□□□□□ -1.87
TOP2A-202ENST00000577541 UBAP2Q5T6F2 1119 aaKnown RBP3.38□□□□□ -1.87
TOP2A-202ENST00000577541 SYDE2Q5VT97 1194 aa3.38□□□□□ -1.87
TOP2A-202ENST00000577541 PRAMEF17Q5VTA0 474 aa3.38□□□□□ -1.87
TOP2A-202ENST00000577541 ZGPATQ8N5A5 531 aaKnown RBP3.38□□□□□ -1.87
TOP2A-202ENST00000577541 CAMKK1Q8N5S9 505 aa3.38□□□□□ -1.87
TOP2A-202ENST00000577541 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.38□□□□□ -1.87
TOP2A-202ENST00000577541 NUP133Q8WUM0 1156 aa3.38□□□□□ -1.87
TOP2A-202ENST00000577541 UHRF1Q96T88 793 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-202ENST00000577541 SLC13A1Q9BZW2 595 aa3.38□□□□□ -1.87
TOP2A-202ENST00000577541 FBXO34Q9NWN3 711 aa3.38□□□□□ -1.87
TOP2A-202ENST00000577541 VSX1Q9NZR4 365 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-202ENST00000577541 TUBD1Q9UJT1 453 aa3.38□□□□□ -1.87
TOP2A-202ENST00000577541 AJAP1Q9UKB5 411 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-202ENST00000577541 ZBTB21Q9ULJ3 1066 aa3.38□□□□□ -1.87
TOP2A-202ENST00000577541 PCDHGA2Q9Y5H1 932 aa3.38□□□□□ -1.87
TOP2A-202ENST00000577541 SBNO2Q9Y2G9 1366 aa3.38□□□□□ -1.87
TOP2A-202ENST00000577541 WDR27A2RRH5 827 aa3.37□□□□□ -1.87
TOP2A-202ENST00000577541 SMAD6O43541 496 aaKnown RBP3.37□□□□□ -1.87
TOP2A-202ENST00000577541 URI1O94763 535 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-202ENST00000577541 TMEM191BP0C7N4 346 aa3.37□□□□□ -1.87
TOP2A-202ENST00000577541 ALAS1P13196 640 aa3.37□□□□□ -1.87
TOP2A-202ENST00000577541 NOMO1Q15155 1222 aa3.37□□□□□ -1.87
TOP2A-202ENST00000577541 NPY5RQ15761 445 aa3.37□□□□□ -1.87
TOP2A-202ENST00000577541 KRT71Q3SY84 523 aa3.37□□□□□ -1.87
TOP2A-202ENST00000577541 Q4G0T1 1027 aa3.37□□□□□ -1.87
TOP2A-202ENST00000577541 RNF187Q5TA31 235 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-202ENST00000577541 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-202ENST00000577541 C9orf47Q6ZRZ4 202 aa3.37□□□□□ -1.87
TOP2A-202ENST00000577541 AMOTL1Q8IY63 956 aa3.37□□□□□ -1.87
TOP2A-202ENST00000577541 DCP1BQ8IZD4 617 aaKnown RBP3.37□□□□□ -1.87
TOP2A-202ENST00000577541 GALNT16Q8N428 558 aa3.37□□□□□ -1.87
TOP2A-202ENST00000577541 NLGN4YQ8NFZ3 816 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-202ENST00000577541 MYCBPAPQ8TBZ2 947 aa3.37□□□□□ -1.87
TOP2A-202ENST00000577541 JADE3Q92613 823 aa3.37□□□□□ -1.87
TOP2A-202ENST00000577541 THOC3Q96J01 351 aaKnown RBP3.37□□□□□ -1.87
TOP2A-202ENST00000577541 MRGPRX4Q96LA9 322 aa3.37□□□□□ -1.87
TOP2A-202ENST00000577541 IPPQ9Y573 584 aa3.37□□□□□ -1.87
TOP2A-202ENST00000577541 ACTL7AQ9Y615 435 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms