RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 CREB5Q02930 508 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 DMP1Q13316 513 aaPredicted RBP11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 TRIM29Q14134 588 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 TMEM196Q5HYL7 178 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 GTF3C6Q969F1 213 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 HHIPQ96QV1 700 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 FAM83CQ9BQN1 747 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 RUSC1Q9BVN2 902 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 HAPLN2Q9GZV7 340 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 EBF3Q9H4W6 596 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 TASP1Q9H6P5 420 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 HPS4Q9NQG7 708 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 ANKFY1Q9P2R3 1169 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 LRWD1Q9UFC0 647 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 INVSQ9Y283 1065 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 ASB3Q9Y575 518 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 PCDHGA5Q9Y5G8 931 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 EML5Q05BV3 1969 aa11□□□□□ -0.65
NPLOC4-220ENST00000576940 OR6C75A6NL08 312 aa11□□□□□ -0.65
NPLOC4-220ENST00000576940 TRDMT1O14717 391 aaKnown RBP11□□□□□ -0.65
NPLOC4-220ENST00000576940 ATG13O75143 517 aa11□□□□□ -0.65
NPLOC4-220ENST00000576940 CAVIN2O95810 425 aa11□□□□□ -0.65
NPLOC4-220ENST00000576940 TNFSF9P41273 254 aa11□□□□□ -0.65
NPLOC4-220ENST00000576940 AARSP49588 968 aaKnown RBP eCLIP11□□□□□ -0.65
NPLOC4-220ENST00000576940 PLCB2Q00722 1185 aa11□□□□□ -0.65
NPLOC4-220ENST00000576940 GRSF1Q12849 480 aaKnown RBP eCLIP11□□□□□ -0.65
NPLOC4-220ENST00000576940 MAPK7Q13164 816 aa11□□□□□ -0.65
NPLOC4-220ENST00000576940 RUNX3Q13761 415 aa11□□□□□ -0.65
NPLOC4-220ENST00000576940 NBR1Q14596 966 aa11□□□□□ -0.65
NPLOC4-220ENST00000576940 ZBTB6Q15916 424 aa11□□□□□ -0.65
NPLOC4-220ENST00000576940 ARHGAP15Q53QZ3 475 aa11□□□□□ -0.65
NPLOC4-220ENST00000576940 HAUS3Q68CZ6 603 aa11□□□□□ -0.65
NPLOC4-220ENST00000576940 NAIF1Q69YI7 327 aaPredicted RBP11□□□□□ -0.65
NPLOC4-220ENST00000576940 OVOS1Q6IE37 1185 aa11□□□□□ -0.65
NPLOC4-220ENST00000576940 RINT1Q6NUQ1 792 aa11□□□□□ -0.65
NPLOC4-220ENST00000576940 CAMKK1Q8N5S9 505 aa11□□□□□ -0.65
NPLOC4-220ENST00000576940 C4orf32Q8N8J7 132 aa11□□□□□ -0.65
NPLOC4-220ENST00000576940 KDF1Q8NAX2 398 aaPredicted RBP11□□□□□ -0.65
NPLOC4-220ENST00000576940 GIPC2Q8TF65 315 aa11□□□□□ -0.65
NPLOC4-220ENST00000576940 KIF12Q96FN5 646 aa11□□□□□ -0.65
NPLOC4-220ENST00000576940 NTPCRQ9BSD7 190 aaKnown RBP11□□□□□ -0.65
NPLOC4-220ENST00000576940 EDEM2Q9BV94 578 aa11□□□□□ -0.65
NPLOC4-220ENST00000576940 OXCT2Q9BYC2 517 aaPredicted RBP11□□□□□ -0.65
NPLOC4-220ENST00000576940 IL21Q9HBE4 155 aa11□□□□□ -0.65
NPLOC4-220ENST00000576940 THG1LQ9NWX6 298 aaKnown RBP11□□□□□ -0.65
NPLOC4-220ENST00000576940 WASF3Q9UPY6 502 aa11□□□□□ -0.65
NPLOC4-220ENST00000576940 CCL26Q9Y258 94 aa11□□□□□ -0.65
NPLOC4-220ENST00000576940 RBM19Q9Y4C8 960 aaKnown RBP11□□□□□ -0.65
NPLOC4-220ENST00000576940 TTC26A0AVF1 554 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 PP2D1A8MPX8 630 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 LACTBL1A8MY62 500 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 CLDN3O15551 220 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 TOM1L1O75674 476 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 AKAP3O75969 853 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 ATF6P18850 670 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 WEE1P30291 646 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 CDC25AP30304 524 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 MATR3P43243 847 aaKnown RBP eCLIP10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 MCM2P49736 904 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 RAD51AP2Q09MP3 1159 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 ZNF252P-AS1Q0IIN9 211 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 STRN3Q13033 797 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 MYBPC2Q14324 1141 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 NOLC1Q14978 699 aaKnown RBP eCLIP10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 PTPAQ15257 358 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 ANKRD1Q15327 319 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 MGAT5BQ3V5L5 792 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 SH3PXD2AQ5TCZ1 1133 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 ARMCX5Q6P1M9 558 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 C1orf186Q6ZWK4 172 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 ITIH5Q86UX2 942 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 OR10T2Q8NGX3 314 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 SNX29Q8TEQ0 813 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 SENP8Q96LD8 212 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 SEPT5Q99719 369 aaPredicted RBP10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 TMEM121BQ9BXQ6 578 aaPredicted RBP10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 UBQLN1Q9UMX0 589 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 DNM3Q9UQ16 869 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 ABCA7Q8IZY2 2146 aa10.99□□□□□ -0.65
NPLOC4-220ENST00000576940 LAMA5O15230 3695 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 BCLAF3A2AJT9 711 aaKnown RBP10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 RHOBTB1O94844 696 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 FGF19O95750 216 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 ARSAP15289 507 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 TYMPP19971 482 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 CYP3A5P20815 502 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 NMT1P30419 496 aaKnown RBP10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 TUFMP49411 452 aaKnown RBP10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 FXR2P51116 673 aaKnown RBP eCLIP10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 LILRA4P59901 499 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 MCL1Q07820 350 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 ST3GAL1Q11201 340 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 PDIA5Q14554 519 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 SAFBQ15424 915 aaKnown RBP eCLIP10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 TAF12Q16514 161 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 SLC39A12Q504Y0 691 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 TTC38Q5R3I4 469 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 KCNK18Q7Z418 384 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 TMEM150AQ86TG1 271 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 LRRTM3Q86VH5 581 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms