RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 CCDC105Q8IYK2 499 aa18.81■□□□□ 0.6
SMG6-214ENST00000573827 GPD1LQ8N335 351 aa18.81■□□□□ 0.6
SMG6-214ENST00000573827 SHKBP1Q8TBC3 707 aa18.81■□□□□ 0.6
SMG6-214ENST00000573827 PYM1Q9BRP8 204 aaKnown RBP18.81■□□□□ 0.6
SMG6-214ENST00000573827 GZF1Q9H116 711 aaPredicted RBP18.81■□□□□ 0.6
SMG6-214ENST00000573827 BLZF1Q9H2G9 400 aa18.81■□□□□ 0.6
SMG6-214ENST00000573827 HSFX1Q9UBD0 423 aa18.81■□□□□ 0.6
SMG6-214ENST00000573827 DSEQ9UL01 958 aa18.81■□□□□ 0.6
SMG6-214ENST00000573827 SLC27A5Q9Y2P5 690 aa18.81■□□□□ 0.6
SMG6-214ENST00000573827 H0Y858 1186 aa18.8■□□□□ 0.6
SMG6-214ENST00000573827 ZNF197O14709 1029 aa18.8■□□□□ 0.6
SMG6-214ENST00000573827 KIAA0391O15091 583 aaKnown RBP18.8■□□□□ 0.6
SMG6-214ENST00000573827 ACTN4O43707 911 aaKnown RBP18.8■□□□□ 0.6
SMG6-214ENST00000573827 KLRC4O43908 158 aa18.8■□□□□ 0.6
SMG6-214ENST00000573827 SOAT2O75908 522 aa18.8■□□□□ 0.6
SMG6-214ENST00000573827 POLR2BP30876 1174 aaKnown RBP18.8■□□□□ 0.6
SMG6-214ENST00000573827 STARD6P59095 220 aa18.8■□□□□ 0.6
SMG6-214ENST00000573827 TFAMQ00059 246 aaKnown RBP18.8■□□□□ 0.6
SMG6-214ENST00000573827 AMPD3Q01432 767 aa18.8■□□□□ 0.6
SMG6-214ENST00000573827 CUL4BQ13620 913 aa18.8■□□□□ 0.6
SMG6-214ENST00000573827 BMT2Q1RMZ1 405 aa18.8■□□□□ 0.6
SMG6-214ENST00000573827 ARMCX5Q6P1M9 558 aa18.8■□□□□ 0.6
SMG6-214ENST00000573827 PDZD4Q76G19 769 aaPredicted RBP18.8■□□□□ 0.6
SMG6-214ENST00000573827 LIMS2Q7Z4I7 341 aa18.8■□□□□ 0.6
SMG6-214ENST00000573827 GRAMD1CQ8IYS0 662 aa18.8■□□□□ 0.6
SMG6-214ENST00000573827 LEMD2Q8NC56 503 aa18.8■□□□□ 0.6
SMG6-214ENST00000573827 OR5B17Q8NGF7 314 aa18.8■□□□□ 0.6
SMG6-214ENST00000573827 ZNF512Q96ME7 567 aaPredicted RBP18.8■□□□□ 0.6
SMG6-214ENST00000573827 ASB16Q96NS5 453 aa18.8■□□□□ 0.6
SMG6-214ENST00000573827 MKNK1Q9BUB5 465 aa18.8■□□□□ 0.6
SMG6-214ENST00000573827 ZNF334Q9HCZ1 680 aaPredicted RBP18.8■□□□□ 0.6
SMG6-214ENST00000573827 AGPAT3Q9NRZ7 376 aa18.8■□□□□ 0.6
SMG6-214ENST00000573827 FAM86C1Q9NVL1 165 aa18.8■□□□□ 0.6
SMG6-214ENST00000573827 HSPBP1Q9NZL4 362 aa18.8■□□□□ 0.6
SMG6-214ENST00000573827 CFAP45Q9UL16 551 aa18.8■□□□□ 0.6
SMG6-214ENST00000573827 ITGB3P05106 788 aa18.79■□□□□ 0.6
SMG6-214ENST00000573827 GLULP15104 373 aa18.79■□□□□ 0.6
SMG6-214ENST00000573827 GJA1P17302 382 aa18.79■□□□□ 0.6
SMG6-214ENST00000573827 ATF6P18850 670 aa18.79■□□□□ 0.6
SMG6-214ENST00000573827 SV2CQ496J9 727 aa18.79■□□□□ 0.6
SMG6-214ENST00000573827 CYP4A22Q5TCH4 519 aa18.79■□□□□ 0.6
SMG6-214ENST00000573827 PDCL2Q8N4E4 241 aa18.79■□□□□ 0.6
SMG6-214ENST00000573827 LRRC52Q8N7C0 313 aa18.79■□□□□ 0.6
SMG6-214ENST00000573827 LEO1Q8WVC0 666 aaPredicted RBP18.79■□□□□ 0.6
SMG6-214ENST00000573827 ELSPBP1Q96BH3 223 aa18.79■□□□□ 0.6
SMG6-214ENST00000573827 PKMYT1Q99640 499 aa18.79■□□□□ 0.6
SMG6-214ENST00000573827 MTMR12Q9C0I1 747 aa18.79■□□□□ 0.6
SMG6-214ENST00000573827 TRPV4Q9HBA0 871 aa18.79■□□□□ 0.6
SMG6-214ENST00000573827 ASAH2Q9NR71 780 aa18.79■□□□□ 0.6
SMG6-214ENST00000573827 TMLHEQ9NVH6 421 aa18.79■□□□□ 0.6
SMG6-214ENST00000573827 INTS13Q9NVM9 706 aa18.79■□□□□ 0.6
SMG6-214ENST00000573827 L1RE1Q9UN81 338 aa18.79■□□□□ 0.6
SMG6-214ENST00000573827 AGAP1Q9UPQ3 857 aa18.79■□□□□ 0.6
SMG6-214ENST00000573827 HPSEQ9Y251 543 aa18.79■□□□□ 0.6
SMG6-214ENST00000573827 OTOGLQ3ZCN5 2332 aa18.78■□□□□ 0.6
SMG6-214ENST00000573827 COL4A2P08572 1712 aa18.78■□□□□ 0.6
SMG6-214ENST00000573827 FAM237AA0A1B0GTK4 181 aa18.78■□□□□ 0.6
SMG6-214ENST00000573827 PVALEFA0A1B0GWK0 134 aa18.78■□□□□ 0.6
SMG6-214ENST00000573827 SLFN14P0C7P3 912 aa18.78■□□□□ 0.6
SMG6-214ENST00000573827 PNPLA4P41247 253 aa18.78■□□□□ 0.6
SMG6-214ENST00000573827 SLC39A12Q504Y0 691 aa18.78■□□□□ 0.6
SMG6-214ENST00000573827 LMBRD2Q68DH5 695 aaPredicted RBP18.78■□□□□ 0.6
SMG6-214ENST00000573827 IQCEQ6IPM2 695 aa18.78■□□□□ 0.6
SMG6-214ENST00000573827 STXBP4Q6ZWJ1 553 aa18.78■□□□□ 0.6
SMG6-214ENST00000573827 GAREM2Q75VX8 874 aa18.78■□□□□ 0.6
SMG6-214ENST00000573827 DTWD2Q8NBA8 298 aa18.78■□□□□ 0.6
SMG6-214ENST00000573827 PSMG2Q969U7 264 aa18.78■□□□□ 0.6
SMG6-214ENST00000573827 RSPRY1Q96DX4 576 aa18.78■□□□□ 0.6
SMG6-214ENST00000573827 ZNF560Q96MR9 790 aa18.78■□□□□ 0.6
SMG6-214ENST00000573827 IL21Q9HBE4 155 aa18.78■□□□□ 0.6
SMG6-214ENST00000573827 GDAP2Q9NXN4 497 aa18.78■□□□□ 0.6
SMG6-214ENST00000573827 ITGA11Q9UKX5 1188 aa18.78■□□□□ 0.6
SMG6-214ENST00000573827 TCHHQ07283 1943 aa18.78■□□□□ 0.6
SMG6-214ENST00000573827 UBE4BO95155 1302 aa18.77■□□□□ 0.6
SMG6-214ENST00000573827 MYL4P12829 197 aa18.77■□□□□ 0.6
SMG6-214ENST00000573827 CMA1P23946 247 aa18.77■□□□□ 0.6
SMG6-214ENST00000573827 CDR1P51861 262 aa18.77■□□□□ 0.6
SMG6-214ENST00000573827 PLD1Q13393 1074 aa18.77■□□□□ 0.6
SMG6-214ENST00000573827 TEAD2Q15562 447 aa18.77■□□□□ 0.6
SMG6-214ENST00000573827 SLC44A4Q53GD3 710 aa18.77■□□□□ 0.6
SMG6-214ENST00000573827 DNAJB7Q7Z6W7 309 aaPredicted RBP18.77■□□□□ 0.6
SMG6-214ENST00000573827 OSTM1Q86WC4 334 aa18.77■□□□□ 0.6
SMG6-214ENST00000573827 C12orf56Q8IXR9 622 aa18.77■□□□□ 0.6
SMG6-214ENST00000573827 ELMOD1Q8N336 334 aa18.77■□□□□ 0.6
SMG6-214ENST00000573827 SMARCD2Q92925 531 aa18.77■□□□□ 0.6
SMG6-214ENST00000573827 PAGE5Q96GU1 130 aa18.77■□□□□ 0.6
SMG6-214ENST00000573827 FOXQ1Q9C009 403 aa18.77■□□□□ 0.6
SMG6-214ENST00000573827 FAM13BQ9NYF5 915 aa18.77■□□□□ 0.6
SMG6-214ENST00000573827 SERTAD1Q9UHV2 236 aa18.77■□□□□ 0.6
SMG6-214ENST00000573827 ASB3Q9Y575 518 aa18.77■□□□□ 0.6
SMG6-214ENST00000573827 ZNF233A6NK53 670 aa18.76■□□□□ 0.59
SMG6-214ENST00000573827 PROB1E7EW31 1015 aa18.76■□□□□ 0.59
SMG6-214ENST00000573827 GABRDO14764 452 aa18.76■□□□□ 0.59
SMG6-214ENST00000573827 LRRN2O75325 713 aa18.76■□□□□ 0.59
SMG6-214ENST00000573827 PFKFB1P16118 471 aa18.76■□□□□ 0.59
SMG6-214ENST00000573827 VIPR2P41587 438 aa18.76■□□□□ 0.59
SMG6-214ENST00000573827 AFMP43652 599 aa18.76■□□□□ 0.59
SMG6-214ENST00000573827 EPHB3P54753 998 aa18.76■□□□□ 0.59
SMG6-214ENST00000573827 SNW1Q13573 536 aaKnown RBP18.76■□□□□ 0.59
SMG6-214ENST00000573827 MLF2Q15773 248 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms