RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 PTPRNQ16849 979 aa7.68□□□□□ -1.18
CHD3-213ENST00000571249 PLEKHG6Q3KR16 790 aa7.68□□□□□ -1.18
CHD3-213ENST00000571249 USP49Q70CQ1 688 aa7.68□□□□□ -1.18
CHD3-213ENST00000571249 SLC41A1Q8IVJ1 513 aa7.68□□□□□ -1.18
CHD3-213ENST00000571249 PGBD1Q96JS3 809 aa7.68□□□□□ -1.18
CHD3-213ENST00000571249 LGMNQ99538 433 aa7.68□□□□□ -1.18
CHD3-213ENST00000571249 POLR3CQ9BUI4 534 aaPredicted RBP7.68□□□□□ -1.18
CHD3-213ENST00000571249 KRT23Q9C075 422 aa7.68□□□□□ -1.18
CHD3-213ENST00000571249 SMG9Q9H0W8 520 aaKnown RBP7.68□□□□□ -1.18
CHD3-213ENST00000571249 EBF3Q9H4W6 596 aa7.68□□□□□ -1.18
CHD3-213ENST00000571249 CYP4F11Q9HBI6 524 aa7.68□□□□□ -1.18
CHD3-213ENST00000571249 ZBTB40Q9NUA8 1239 aa7.68□□□□□ -1.18
CHD3-213ENST00000571249 MTRRQ9UBK8 725 aa7.68□□□□□ -1.18
CHD3-213ENST00000571249 SEC63Q9UGP8 760 aaKnown RBP7.68□□□□□ -1.18
CHD3-213ENST00000571249 TCEAL9Q9UHQ7 104 aa7.68□□□□□ -1.18
CHD3-213ENST00000571249 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.68□□□□□ -1.18
CHD3-213ENST00000571249 PCDHA10Q9Y5I2 948 aa7.68□□□□□ -1.18
CHD3-213ENST00000571249 NBEAL1Q6ZS30 2694 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 NIPBLQ6KC79 2804 aaeCLIP7.67□□□□□ -1.18
CHD3-213ENST00000571249 ANKHD1Q8IWZ3 2542 aaKnown RBP7.67□□□□□ -1.18
CHD3-213ENST00000571249 CASTOR2A6NHX0 329 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 EIF5BO60841 1220 aaKnown RBP7.67□□□□□ -1.18
CHD3-213ENST00000571249 PRAMEF12O95522 483 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 ARSAP15289 507 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 DRD1P21728 446 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 AKAP5P24588 427 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 MAOBP27338 520 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 GRNP28799 593 aaKnown RBP7.67□□□□□ -1.18
CHD3-213ENST00000571249 ELF1P32519 619 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 DNM2P50570 870 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 SEC13P55735 322 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 USP46P62068 366 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 RPL6Q02878 288 aaKnown RBP7.67□□□□□ -1.18
CHD3-213ENST00000571249 ZNF33AQ06730 810 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 RTP5Q14D33 572 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 ZNF787Q6DD87 383 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 IQCEQ6IPM2 695 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 TMPRSS12Q86WS5 348 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 PLA2G4DQ86XP0 818 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 SRRM1Q8IYB3 904 aaKnown RBP7.67□□□□□ -1.18
CHD3-213ENST00000571249 FAM26EQ8N5C1 309 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 OTUD7AQ8TE49 926 aaPredicted RBP7.67□□□□□ -1.18
CHD3-213ENST00000571249 ACDQ96AP0 544 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 P2RY13Q9BPV8 354 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 SH2D3AQ9BRG2 576 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 MINDY3Q9H8M7 445 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 IFT122Q9HBG6 1241 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 SENP2Q9HC62 589 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 STARD5Q9NSY2 213 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 KLK14Q9P0G3 267 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 DDX19BQ9UMR2 479 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 FNDC3AQ9Y2H6 1198 aaKnown RBP7.67□□□□□ -1.18
CHD3-213ENST00000571249 GIT1Q9Y2X7 761 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 SAMM50Q9Y512 469 aa7.67□□□□□ -1.18
CHD3-213ENST00000571249 ANO9A1A5B4 782 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 IPO5O00410 1097 aaKnown RBP7.66□□□□□ -1.18
CHD3-213ENST00000571249 ABLIM3O94929 683 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 ITGB2P05107 769 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 ITGB6P18564 788 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 DPP6P42658 865 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 EPHA5P54756 1037 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 ARPP19P56211 112 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 ROR1Q01973 937 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 PRKCEQ02156 737 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 TWF1Q12792 350 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 GRIK3Q13003 919 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 NMIQ13287 307 aaPredicted RBP7.66□□□□□ -1.18
CHD3-213ENST00000571249 RUNX3Q13761 415 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 PTPAQ15257 358 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 TARBP2Q15633 366 aaKnown RBP7.66□□□□□ -1.18
CHD3-213ENST00000571249 CRY1Q16526 586 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 TBC1D25Q3MII6 688 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 MTERF2Q49AM1 385 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 SPDYCQ5MJ68 293 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 TMEM164Q5U3C3 297 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.66□□□□□ -1.18
CHD3-213ENST00000571249 DBX2Q6ZNG2 339 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 CYB5R4Q7L1T6 521 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 SMAP1Q8IYB5 467 aaPredicted RBP7.66□□□□□ -1.18
CHD3-213ENST00000571249 ELMOD1Q8N336 334 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 ZNF461Q8TAF7 563 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 BPIFB1Q8TDL5 484 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 USP33Q8TEY7 942 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 SPACA7Q96KW9 195 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 ZNF512Q96ME7 567 aaPredicted RBP7.66□□□□□ -1.18
CHD3-213ENST00000571249 CDC6Q99741 560 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 FAM83CQ9BQN1 747 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 ZNF577Q9BSK1 485 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 LRRC3Q9BY71 257 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 GPR88Q9GZN0 384 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 ASAH2Q9NR71 780 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 TM7SF3Q9NS93 570 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 TBC1D22BQ9NU19 505 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 GMIPQ9P107 970 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 INSL5Q9Y5Q6 135 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 BACE2Q9Y5Z0 518 aa7.66□□□□□ -1.18
CHD3-213ENST00000571249 RP1L1Q8IWN7 2480 aaPredicted RBP7.66□□□□□ -1.18
CHD3-213ENST00000571249 IGKV6-21A0A0C4DH24 114 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 A0A1W2PQD8 194 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 TMEM150BA6NC51 233 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms