RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 LCORLQ8N3X6 602 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 NME8Q8N427 588 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 NUP43Q8NFH3 380 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 CLEC4DQ8WXI8 215 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 PAWRQ96IZ0 340 aaKnown RBP8.04□□□□□ -1.12
CNOT1-222ENST00000570139 UPF3BQ9BZI7 483 aaKnown RBP8.04□□□□□ -1.12
CNOT1-222ENST00000570139 KRT23Q9C075 422 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 LRRC27Q9C0I9 530 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 VPS11Q9H270 941 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 ARMT1Q9H993 441 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 SPON1Q9HCB6 807 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 FBLN5Q9UBX5 448 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 FBXO9Q9UK97 447 aaPredicted RBP8.04□□□□□ -1.12
CNOT1-222ENST00000570139 NUDT5Q9UKK9 219 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 ACSL6Q9UKU0 697 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.04□□□□□ -1.12
CNOT1-222ENST00000570139 MYPNQ86TC9 1320 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 CDK5RAP2Q96SN8 1893 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 ROBO3Q96MS0 1386 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 GPR75-ASB3A0A0A6YYF3 556 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 A0A0G2JLW4 131 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 PPIP5K2O43314 1243 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 CHGBP05060 677 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 COL6A1P12109 1028 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 EDNRBP24530 442 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 MAN1A1P33908 653 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 MCM5P33992 734 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 GRK6P43250 576 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 GPR15P49685 360 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 MVKQ03426 396 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 CUL4AQ13619 759 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 ADRM1Q16186 407 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 ADCK5Q3MIX3 580 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 SBK1Q52WX2 424 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 CCDC178Q5BJE1 867 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 MUM1L1Q5H9M0 696 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 OXR1Q8N573 874 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 CALML6Q8TD86 181 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 NRG4Q8WWG1 115 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 PHKBQ93100 1093 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 TEKT1Q969V4 418 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 TP53INP1Q96A56 240 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 RGMAQ96B86 450 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 ZC3H10Q96K80 434 aaKnown RBP8.03□□□□□ -1.12
CNOT1-222ENST00000570139 ADI1Q9BV57 179 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 CERS4Q9HA82 394 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 ZNF287Q9HBT7 754 aa8.03□□□□□ -1.12
CNOT1-222ENST00000570139 DCP1AQ9NPI6 582 aaPredicted RBP8.03□□□□□ -1.12
CNOT1-222ENST00000570139 TCRBV5S2A0A599 114 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 ACOT7O00154 380 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 SLC26A4O43511 780 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 FTLP02792 175 aaPredicted RBP8.02□□□□□ -1.13
CNOT1-222ENST00000570139 GLI4P10075 376 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 TNFSF4P23510 183 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 CASP5P51878 434 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 CCT2P78371 535 aaKnown RBP8.02□□□□□ -1.13
CNOT1-222ENST00000570139 AKNAD1Q5T1N1 836 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 GJC2Q5T442 439 aaPredicted RBP8.02□□□□□ -1.13
CNOT1-222ENST00000570139 PRAMEF18Q5VWM3 479 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 IZUMO3Q5VZ72 239 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 BICRALQ6AI39 1079 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 MMS22LQ6ZRQ5 1243 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 MFSD6Q6ZSS7 791 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 MILR1Q7Z6M3 343 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 ADGRA1Q86SQ6 560 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 KRTAP1-3Q8IUG1 177 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 SPPL2CQ8IUH8 684 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 LYSMD2Q8IV50 215 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 CDYL2Q8N8U2 506 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 MIGA1Q8NAN2 632 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 SHKBP1Q8TBC3 707 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 ZNF384Q8TF68 577 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 MTFMTQ96DP5 389 aaKnown RBP8.02□□□□□ -1.13
CNOT1-222ENST00000570139 TMX3Q96JJ7 454 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 AGXT2Q9BYV1 514 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 TAOK3Q9H2K8 898 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 ZHX3Q9H4I2 956 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 EPB41L4AQ9HCS5 686 aaPredicted RBP8.02□□□□□ -1.13
CNOT1-222ENST00000570139 STARD7Q9NQZ5 370 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 AATFQ9NY61 560 aaKnown RBP eCLIP8.02□□□□□ -1.13
CNOT1-222ENST00000570139 CHMP5Q9NZZ3 219 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 BCCIPQ9P287 314 aaKnown RBP eCLIP8.02□□□□□ -1.13
CNOT1-222ENST00000570139 ARHGAP28Q9P2N2 729 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 TPCN1Q9ULQ1 816 aa8.02□□□□□ -1.13
CNOT1-222ENST00000570139 COL2A1P02458 1487 aaPredicted RBP8.01□□□□□ -1.13
CNOT1-222ENST00000570139 A0A088AWK7 358 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.01□□□□□ -1.13
CNOT1-222ENST00000570139 DHX16O60231 1041 aaKnown RBP8.01□□□□□ -1.13
CNOT1-222ENST00000570139 NRP2O60462 931 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 PCDH8O95206 1070 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 ZGLP1P0C6A0 271 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 MYF5P13349 255 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 PRKCAP17252 672 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 PPM1AP35813 382 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 PIK3CBP42338 1070 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 BTDP43251 543 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 RCAN1P53805 252 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 EVCP57679 992 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 NUCB2P80303 420 aa8.01□□□□□ -1.13
CNOT1-222ENST00000570139 PRKCQQ04759 706 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms